mRNA_H-paniculata_contig611.13815.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: D7FMP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 3.590e-66 Identity = 163/393 (41.48%), Postives = 207/393 (52.67%), Query Frame = 3
Query: 180 MRVLLGTWAPLPLS--ALALSSLR----GMPRRE-VTSTGRIA-KLPAWVAGA-----GGSDQVPSRPIHN--TSDSKMPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTIGLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDV-----------IAGQDNSRSSSSADNDWPGVRLEALSAGYQT---------VDSETPSWILTPSKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTPSSSDIRSEVVDLAGRRKSXXXXXXXXXXXSAAGTERYTRKMAKLSAEQRGG-------HSRSDCCDAGAEDARRVFLEEIPEPSGLPRWCSYNGPRVV 1232
M++L T PLP+S ALALS+ R +PR V T +A + PAWV G GGS + + + ++PLVQAI DEL + +P EA+ G DSPV+SKVLR+MD LQP DLGLSE+ GL +SL +PVF GG FEM VF+LP G +PLHDHPNM VLSRILFG+L+V SYD+ + AD + R EA + V + TPS++LTPS+GNVH+FRAP ACAVFDVL+P YD+S+GR C+YFR E +S + + VV A R AG + + E+ GG RV L E+PEP GLPRW Y GP V
Sbjct: 1 MQLLRRTCGPLPVSVSALALSAGRRTSLSLPRAAAVARTDEVAARTPAWVPGGVLRRGGGSFRGGGGLFAELQSGEEEVPLVQAICDELVAVTDPEGEARMGSDSPVISKVLRLMDKLQPRDLGLSERDLQ-GLTQSLCMPVF--GGPEACFEMTVFVLPKGGEIPLHDHPNMAVLSRILFGTLDVTSYDMEEXXXXXXXXXXXXXXXXXXXTFADAELR--RKEAQRVVFAXXXXXXEGGRVTAATPSFLLTPSEGNVHSFRAPTACAVFDVLIPPYDSSRGRKCSYFRAETPLTSRNGGTAVV--AAR---------------TAGAD-----DGGVEGEREGGPXXXXXXXXXXXXXXXXXXXXERVVLREVPEPEGLPRWSRYYGPSVT 366
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A7S1TN51_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN51_9RHOD) HSP 1 Score: 114 bits (286), Expect = 1.030e-25 Identity = 72/208 (34.62%), Postives = 112/208 (53.85%), Query Frame = 3
Query: 366 KMPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTIGLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEA-----LSAGYQTVDSETPSWILTPSKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTPSSSDI 974
+M ++++ D LR++ LD +S V ++ N+ +LG+ + + + ++A G + F M+VF+LP A +PLHDHPNMVV S+IL+G LE+ +YD++ SSA D+ VR+ LS+G V ++T GNVH FRA + AVFD+L+P Y+ +GRSC YF +P+ DI
Sbjct: 1 RMKALRSLVDALRRVVETGGANAVALDERTVSSVAGLVRNIDAPELGVLRENYERRRGREVCVE-YIAVGECEQFSMSVFVLPPNACIPLHDHPNMVVFSKILWGELELHAYDLLPDDG-----SSAARDYSTVRVRPRDPRLLSSGEVAVTAQT--------LGNVHEFRATQWTAVFDLLIPPYNPLEGRSCHYFG-HPSPAQGDI 193
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A2J6JZB1_LACSA (Cysteine dioxygenase n=5 Tax=Asteraceae TaxID=4210 RepID=A0A2J6JZB1_LACSA) HSP 1 Score: 112 bits (279), Expect = 1.640e-24 Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 3
Query: 369 MPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTIGLMESLSIPVFVAGGG--------------SKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTVDSETPSWILTPSKG-NVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVE---NTPSSSDIRSEVV 989
MP +Q +Y+ + +P + L KV ++D ++P D+GL ++ L+ S + PV GG S+SF M +F +P+ + +PLH+HP M VLS++L+GS++V+SYD + + S D + + G + S T + L P+KG N+H FRA CA+FD+L P Y + GR CTYFR N P + ++ E +
Sbjct: 1 MPAIQKLYNVCKVSLSPNGPVSED----ALEKVRALLDKIKPSDVGLEQEAQ---LVRSWTGPVNERNGGLRSLPPIKYIHIHESESFSMGIFCMPSSSIIPLHNHPGMTVLSKLLYGSMQVKSYDWL----DVPLPSDMSEDAIARPAKLVKDGVMSGPSRTTT--LYPTKGGNIHCFRAITPCAIFDILSPPYSSEDGRHCTYFRRSLGGNLPCTIEVDGETL 212
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: UPI00053C6B50 (plant cysteine oxidase 5 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6B50) HSP 1 Score: 112 bits (279), Expect = 1.640e-24 Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 3
Query: 444 DSPV----LSKVLRMMDNLQPCDLGLSEKQSTIGLMESLSIPVFVAGGGSK--------------SFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTVDSET----PSWILTP-SKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRV---ENTPSSSDIRSEVV 989
D PV L KV +++ ++P D+GL ++ L+ + S PV V GG SF + +F +P + +PLH+HP M VLS++++GSL V+SYD I D P L+A AG D+E PS +L P S GN+H F+A CA+FD+L P Y +S GR CTYFR ++ P ++ EVV
Sbjct: 19 DGPVSEEGLEKVRNVLEKIKPSDVGLEQEAQ---LVRTWSGPVNVHNGGHHTLPAIKYLHLHECDSFSIGIFCMPPSSIIPLHNHPGMTVLSKLVYGSLHVKSYDWI----------DTDAPEPDGPLQAR-AGKLVKDTEMTAPCPSTLLYPTSGGNIHCFKAITHCAIFDILSPPYSSSHGRHCTYFRKSPRQDLPGEMEVNGEVV 212
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A8B7C3F5_PHODC (Cysteine dioxygenase n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7C3F5_PHODC) HSP 1 Score: 112 bits (280), Expect = 2.340e-24 Identity = 77/228 (33.77%), Postives = 113/228 (49.56%), Query Frame = 3
Query: 324 DQVPSRPIHNTSDSKMPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLS---------EKQSTIG-----LMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTVDSETPSWILTP-SKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTPS 962
D+ P+ IH SK VQ +YD I + +E K+ + + + ++DN++P D+G+ ++ ST+ L +SL+ +V F M VF PAGA+LPLHDHP MVVLS++L+GS V+SYD + R L + A Q + + + +L P S GN+H+F A CA+ DVL P Y QGR TY+ PS
Sbjct: 24 DKAPTMAIHAKERSK---VQRLYDACSTIFS--SEKKRSPNLKQIRWLQGILDNIEPVDVGIDGSSDGRSGVDESSTVNRDGLILGQSLTQITYVHIHECDDFSMGVFCFPAGAKLPLHDHPEMVVLSKLLYGSASVKSYDWFVTPSSRREKGG---------LAKVVANDQVLQAPCKASVLFPRSGGNIHSFTALTPCAILDVLAPPYADEQGRPSTYYSETPIPS 237
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A6P6XJQ5_COFAR (Cysteine dioxygenase n=5 Tax=Coffea TaxID=13442 RepID=A0A6P6XJQ5_COFAR) HSP 1 Score: 111 bits (277), Expect = 2.880e-24 Identity = 72/225 (32.00%), Postives = 111/225 (49.33%), Query Frame = 3
Query: 369 MPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTI-----------GLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQT---VDSETPSWILTP-SKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVE---NTPSSSDIRSEVV 989
MP VQ +Y+ + P + L KV ++D ++P D+GL ++ + G+ ES+ ++ S SF M +F +PA + +PLH+HP M VLS++L+GSL V+S+D I D P EA A + + T + +L P S GN+H F+A CA+FD+L P Y + GR CTYFR + P S ++ E +
Sbjct: 1 MPAVQKLYNACKASLTP----NGPISEEALEKVRALLDKIKPSDVGLEQEAQLVRGWKGSVRGHNGVPESMPPIKYLHLHESDSFSMGIFCMPAYSIIPLHNHPGMTVLSKLLYGSLHVKSFDWI------------DIPGPSDPSEARPAKLARDCEMTAPTETTVLYPTSGGNIHCFKAITPCAIFDILSPPYSSEDGRHCTYFRRSPRGDLPGSLEVDGETI 209
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A834GRV5_RHOSS (Cysteine dioxygenase n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GRV5_RHOSS) HSP 1 Score: 110 bits (276), Expect = 3.870e-24 Identity = 67/209 (32.06%), Postives = 105/209 (50.24%), Query Frame = 3
Query: 369 MPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTI------------GLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSA-----GYQTVDSETPSWILTPSKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFR 944
MP +Q +Y+ + +P + + KV ++D ++P D+GL ++ + ++SL ++ S+SF M +F LP + +PLH+HP M VLS++L+G+L V+SYD + G P +L+A A G SE P+ + S GN+H+FRA CA+FD+L P Y GR CTYFR
Sbjct: 1 MPAIQKLYNACKVSLSP----NGPVSEEAVEKVRTLLDKIKPSDVGLEQEAQLVRGWTSSVHGRNGNNLQSLPPITYLHIHESESFTMGIFCLPPSSIIPLHNHPGMTVLSKLLYGTLHVKSYDWVDG--------------PSGQLQARPAKLVKNGEMRAPSE-PTVLYPTSGGNIHSFRALTPCAIFDILAPPYLAEDGRDCTYFR 190
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: A0A2Z7A3F4_9LAMI (Cysteine dioxygenase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7A3F4_9LAMI) HSP 1 Score: 110 bits (275), Expect = 7.660e-24 Identity = 75/225 (33.33%), Postives = 117/225 (52.00%), Query Frame = 3
Query: 366 KMPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSE--KQSTIG----------LMESLSIPV-FVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTVDSETPSWILTPSKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTPSSSDIRSEVVDLAG 1001
K+P +QA+YD ++ +P A + S + + +MD+L P D+GL++ K+ G ++ + P+ +V ++F M +F P + +PLHDHP M VLS++L+GSL V+SYD + + ++ SA VRL L + S + S GN+H F A CAV D+L P Y+ S GRSCTY+R + P SS E ++G
Sbjct: 5 KIPAIQALYDLCKQTFSPSAASPPS--SQAIKSLSSLMDSLGPADVGLTDAGKEDERGHGPFGVQFFNRVDRWAQPITYVDVHEGRNFTMCIFCFPTSSVIPLHDHPGMTVLSKVLYGSLHVKSYDWV---EPAQIQISAGPQRSKVRLAKLVVDEVLTAPCSTSVLYPRSGGNLHCFTAVGPCAVLDILAPPYNESCGRSCTYYR--DYPRSSFYVKEDESVSG 222
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: UPI001FB19433 (plant cysteine oxidase 5-like isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB19433) HSP 1 Score: 108 bits (271), Expect = 1.800e-23 Identity = 67/212 (31.60%), Postives = 101/212 (47.64%), Query Frame = 3
Query: 369 MPLVQAIYDELRKIRNPLAEAKKGLDSPV----LSKVLRMMDNLQPCDLGLSEKQSTI-----------GLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTVDSETPSWILTPSKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTP 959
MP +Q +Y+ + D PV L K+ ++D ++P D+GL ++ + G S ++ +SF M +F +P + +PLH+HPNM VLS++LFG+L V SYD I+ D+S+ S R L + + + S GN+H FRA CA+FD+L P Y + GR CTYFR P
Sbjct: 1 MPAIQKLYNACK--------VSLSQDGPVSEEGLVKIRGLLDKIKPSDVGLEQEAQLVRTWTDPTNGRNGTHRSTPPIKYLRLSECESFTMGIFCMPPSSIIPLHNHPNMTVLSKLLFGTLHVTSYDWISTLDSSQDIKS--------RPAKLVKDCDMIAPCGTTVLYPTSGGNIHCFRAVTPCAIFDILSPPYSSEDGRHCTYFRSSQAP 196
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Match: UPI000C1CFDD0 (plant cysteine oxidase 5-like isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFDD0) HSP 1 Score: 108 bits (271), Expect = 1.980e-23 Identity = 72/219 (32.88%), Postives = 107/219 (48.86%), Query Frame = 3
Query: 369 MPLVQAIYDELRKIRNPLAEAKKGLDSPVLSKVLRMMDNLQPCDLGLSEKQSTI-----------GLMESLSIPVFVAGGGSKSFEMAVFILPAGARLPLHDHPNMVVLSRILFGSLEVESYDVIAGQDNSRSSSSADNDWPGVRLEALSAGYQTV----DSETP--SWILTP-SKGNVHAFRAPRACAVFDVLLPRYDTSQGRSCTYFRVENTPSSSD 971
MP VQ +Y+ + +P L L KV ++D ++P D+GL ++ + G + SL ++ SF M +F +P + +PLH+HP M VLS++++GSL V+SYD I D PG+ + +A V D P + IL P S GN+H F+A CA+FD+L P Y + GR CTYFR +T D
Sbjct: 1 MPAVQKLYNTCKASLSP----NGPLSEDALEKVRNLLDKIKPSDIGLEQEAQLVRGWRGTLRERNGGLRSLPPIKYLHVHECDSFSMGIFCMPPFSIIPLHNHPGMTVLSKLVYGSLHVKSYDWI--------------DIPGLSDPSQAARPAKVVRDCDMSAPCEATILYPTSGGNIHCFKAITPCAIFDILSPPYSSEDGRHCTYFRRSSTGDLPD 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig611.13815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig611.13815.1 >prot_H-paniculata_contig611.13815.1 ID=prot_H-paniculata_contig611.13815.1|Name=mRNA_H-paniculata_contig611.13815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=356bp MRVLLGTWAPLPLSALALSSLRGMPRREVTSTGRIAKLPAWVAGAGGSDQback to top mRNA from alignment at H-paniculata_contig611:13709..22026+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig611.13815.1 ID=mRNA_H-paniculata_contig611.13815.1|Name=mRNA_H-paniculata_contig611.13815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8318bp|location=Sequence derived from alignment at H-paniculata_contig611:13709..22026+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig611:13709..22026+ >mRNA_H-paniculata_contig611.13815.1 ID=mRNA_H-paniculata_contig611.13815.1|Name=mRNA_H-paniculata_contig611.13815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2136bp|location=Sequence derived from alignment at H-paniculata_contig611:13709..22026+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |