prot_H-paniculata_contig611.13814.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig611.13814.1
Unique Nameprot_H-paniculata_contig611.13814.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A6H5KZV5_9PHAE (ER membrane protein complex subunit 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.090e-48
Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 0
Query:    5 MGMGMGGPDMGGAGAGGADDVDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            MGMGMG P+MG            RQFYS+ENIAHN KVLEYCRT++CA+GGIVSGIL LTG  GL +YL++Y++VSL L+VKMGT D SLYT  KG L +F   GVGNYALTYILFWTLAYTLVYIY
Sbjct:    4 MGMGMG-PEMGXXXX--XXXXXXRQFYSSENIAHNKKVLEYCRTSLCAVGGIVSGILGLTGLVGLFSYLILYLVVSLSLVVKMGTTDVSLYTAGKGKLAMFAFGGVGNYALTYILFWTLAYTLVYIY 127          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A835YLI1_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLI1_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.080e-25
Identity = 54/112 (48.21%), Postives = 76/112 (67.86%), Query Frame = 0
Query:   22 ADDVDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTK--GGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            A + D++ F +A+N+ HN K++  CRT++CA+ GI +GIL  TG  GL+ YL+ Y  VSL LL KMG  D S YT  K   G+  F++ G+   ++T+ILFWTLAY LVY+Y
Sbjct:   10 AGEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGF-DRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 120          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A1V9Z814_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z814_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.780e-15
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 0
Query:   29 QFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            +F+S EN+A N  V+E+  TAM  + G ++G++ LTG  G +  +V+Y++ S  LL KMG   A  +         F+  G+G + +++ILFWTLAY LV+IY
Sbjct:    9 EFFSMENMAKNEGVVEFTHTAMSVVSGSLAGVMGLTGVQGFVCMVVLYLLTSGALLAKMGLDVAPYFNMNVAS---FLFHGIGGHLVSFILFWTLAYGLVHIY 108          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A067BR70_SAPPC (ER membrane protein complex subunit 6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR70_SAPPC)

HSP 1 Score: 73.2 bits (178), Expect = 3.100e-14
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0
Query:   29 QFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            +F+S EN+A N  V+E+  TAM  + G ++G++ LTG  G    +++Y+  S  LL KMG AD S Y      +  F+  G+G + +++ILFWTLAY LV+IY
Sbjct:   10 EFFSMENMAKNEAVVEFTHTAMSVVSGSLAGVMGLTGLQGFGCMILLYLATSGALLAKMG-ADCSPYFNMN--VVSFLFYGIGGHLVSFILFWTLAYGLVHIY 109          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A2K1IUJ4_PHYPA (ER membrane protein complex subunit 6 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IUJ4_PHYPA)

HSP 1 Score: 69.3 bits (168), Expect = 1.560e-12
Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   23 DDVDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            DD DE   YS EN+  N +++ Y RT +  +GG+++G+L LTG +G L Y ++ ++ S+G+  K    D   Y  +   +   +  G+G   L++ILFWT AY +V+I+
Sbjct:   24 DDADEVPAYSQENVQLNMRMIYYSRTFLSIVGGVIAGVLGLTGISGFLCYFLIMMLASVGVAAK-AKFDVHSYFDSWNRI---LFDGIGQGLLSFILFWTFAYDIVHIF 128          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A6I9UGR4_SESIN (ER membrane protein complex subunit 6 n=3 Tax=Lamiales TaxID=4143 RepID=A0A6I9UGR4_SESIN)

HSP 1 Score: 68.6 bits (166), Expect = 2.560e-12
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   22 ADDVDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            +D +DE   ++ EN+ +N +V+ Y RT M  IGG+++GIL  TG  G + Y +V  I ++GL  K G A  S +          V+ G+    L+++LFWT AY +V+I+
Sbjct:   15 SDALDEIPTFNVENMQNNTRVINYSRTFMSIIGGVIAGILGFTGLMGFIFYFLVMAITTVGLAAKTGFAVHSYFDSWNR----IVLDGILGGLLSFVLFWTFAYDIVHIF 120          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A484K5Q0_9ASTE (ER membrane protein complex subunit 6 n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484K5Q0_9ASTE)

HSP 1 Score: 68.2 bits (165), Expect = 3.610e-12
Identity = 39/110 (35.45%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   22 ADDVDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            ++++DE   ++AEN+ +N K++ Y RT M  IGG+++G+L LTG  G + Y ++  I S+GLL K   A  S+++  +    + +   +G   ++++LFWTLAY +V+I+
Sbjct:   15 SNEIDELPTFNAENMQNNVKIIYYSRTFMAIIGGVIAGVLGLTGLMGFIFYFLIMGITSVGLLAK---AKFSVFSYFESWNRIMLDGFLGG-LMSFVLFWTLAYDIVHIF 120          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: UPI00125E678C (ER membrane protein complex subunit 6 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E678C)

HSP 1 Score: 67.8 bits (164), Expect = 5.100e-12
Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   25 VDERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            +DE   +SAEN+ +N KV+ Y RT M  IGG+++GIL LTG  G + Y ++  I S GL+ K   A  S+++       + +   +G   L+++LFWTLAY +V+I+
Sbjct:   18 IDELPTFSAENMQNNMKVIYYSRTFMSIIGGVIAGILGLTGLMGFIFYFLIMGITSAGLIAK---AKFSVFSYFDNWNRIILDGFLGG-LLSFVLFWTLAYDIVHIF 120          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A7S3ZWF8_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWF8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.370e-12
Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = 0
Query:   26 DERQFYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFVIAGVGNYALTYILFWTLAYTLVYIY 131
            D +  +  + +AHN   ++ CR+ +   G + +G++  TG  GLL ++  Y++ S+ LL +M          T   L  FVI G   YAL+++LFWTLAY LV+IY
Sbjct:   10 DAKNLFDRDAMAHNLNAVDGCRSYLTLFGAVGAGVVGATGLRGLLFFVGTYVLGSVALLTRMRCNPVDY---TSESLTKFVIMGAPGYALSFVLFWTLAYALVHIY 112          
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Match: A0A0K9RLR8_SPIOL (ER membrane protein complex subunit 6 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RLR8_SPIOL)

HSP 1 Score: 67.0 bits (162), Expect = 9.220e-12
Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 0
Query:   30 FYSAENIAHNNKVLEYCRTAMCAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKGGLPVFV---IAGVGNYALTYILFWTLAYTLVYIY 131
            F +AEN+ +N KV+ Y RT M  +GGI++GIL  TG TG + Y VV  + S+GL  K   A  S+++  +G   V +   +AG+    ++++LFWT AY +V+I+
Sbjct:   19 FINAENMQNNMKVINYSRTLMSIVGGIIAGILGFTGLTGFIFYFVVMAVTSVGLAAK---AKFSIHSYFEGWNRVLLDGFLAGL----MSFVLFWTFAYDIVHIF 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig611.13814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZV5_9PHAE4.090e-4868.50ER membrane protein complex subunit 6 n=2 Tax=Ecto... [more]
A0A835YLI1_9STRA8.080e-2548.21ER membrane protein complex subunit 6 n=1 Tax=Trib... [more]
A0A1V9Z814_9STRA3.780e-1539.81ER membrane protein complex subunit 6 n=1 Tax=Achl... [more]
A0A067BR70_SAPPC3.100e-1441.75ER membrane protein complex subunit 6 n=2 Tax=Sapr... [more]
A0A2K1IUJ4_PHYPA1.560e-1235.78ER membrane protein complex subunit 6 n=1 Tax=Phys... [more]
A0A6I9UGR4_SESIN2.560e-1236.36ER membrane protein complex subunit 6 n=3 Tax=Lami... [more]
A0A484K5Q0_9ASTE3.610e-1235.45ER membrane protein complex subunit 6 n=3 Tax=Cusc... [more]
UPI00125E678C5.100e-1239.25ER membrane protein complex subunit 6 n=2 Tax=Ipom... [more]
A0A7S3ZWF8_9STRA8.370e-1235.85ER membrane protein complex subunit 6 n=1 Tax=Pela... [more]
A0A0K9RLR8_SPIOL9.220e-1240.00ER membrane protein complex subunit 6 n=1 Tax=Spin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008Rab5-interacting protein familyPFAMPF07019Rab5ipcoord: 42..125
e-value: 1.8E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR20994:SF0ER MEMBRANE PROTEIN COMPLEX SUBUNIT 6coord: 22..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..63
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 22..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig611contigH-paniculata_contig611:9573..13181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig611.13814.1mRNA_H-paniculata_contig611.13814.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig611 8481..13396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig611.13814.1 ID=prot_H-paniculata_contig611.13814.1|Name=mRNA_H-paniculata_contig611.13814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MADPMGMGMGGPDMGGAGAGGADDVDERQFYSAENIAHNNKVLEYCRTAM
CAIGGIVSGILALTGPTGLLAYLVVYIIVSLGLLVKMGTADASLYTPTKG
GLPVFVIAGVGNYALTYILFWTLAYTLVYIY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029008Rab5IP_fam
IPR008504Emc6