mRNA_H-paniculata_contig6104.13808.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: D8LHC1_ECTSI (Glutathione reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC1_ECTSI) HSP 1 Score: 384 bits (985), Expect = 5.270e-130 Identity = 182/220 (82.73%), Postives = 206/220 (93.64%), Query Frame = 1
Query: 1 GGPGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
GGPGGHYDYLV+GGGSGGVSSARRAASHGAKV LIEGTPNLGGTCVNVGCVPKKVMFNAAH++EM+HA+K+YG+TVGE + DW K+K MRDAYVRRLNGIYHRNVEKSGVTLVYG A FVG KK VVEGVEYTADH+++AVGG P+MPD+PGA+LCI+SDGFF ++EQP++VAVVGAGYIAVELAGIF+AL T THLF+RH+RAMRTLDPLLSDILD E+
Sbjct: 13 GGPGGHYDYLVIGGGSGGVSSARRAASHGAKVALIEGTPNLGGTCVNVGCVPKKVMFNAAHINEMLHASKHYGYTVGETSFDWGKLKEMRDAYVRRLNGIYHRNVEKSGVTLVYGMAKFVGPKKAVVEGVEYTADHVMIAVGGTPSMPDVPGAELCINSDGFFDVTEQPKKVAVVGAGYIAVELAGIFDALGTETHLFIRHERAMRTLDPLLSDILDLEM 232
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A836CAZ0_9STRA (Glutathione reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ0_9STRA) HSP 1 Score: 299 bits (765), Expect = 6.910e-97 Identity = 135/215 (62.79%), Postives = 174/215 (80.93%), Query Frame = 1
Query: 16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
H+D +V+GGGSGG++ ARRAA +G K +IE T LGGTCVNVGCVPKK+MFN A +EM+H ++YG+ V +++ DW KIK MRDAY+R+LNGIY NVE++G+ + G A+FVG K + V+ V+YTA+HI++AVGG+P MPDIPGA+LCIDS+GFFA+ QP R+AVVGAGYIAVELAGIFNAL TNTHLF+RHDR +RT DP ++ L E+
Sbjct: 8 HFDLIVIGGGSGGMACARRAAQYGCKAAIIEATSKLGGTCVNVGCVPKKIMFNTAAFNEMLHGGRHYGYDVRDYSFDWGKIKTMRDAYIRKLNGIYMSNVERAGIAFISGFAAFVGPKTLQVDDVQYTAEHIVIAVGGQPTMPDIPGAELCIDSNGFFAMETQPERIAVVGAGYIAVELAGIFNALGTNTHLFVRHDRPLRTFDPTITSALLTEI 222
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A6H5JRG6_9PHAE (Glutathione reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG6_9PHAE) HSP 1 Score: 280 bits (716), Expect = 7.490e-89 Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 1
Query: 16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
H+D+LV+GGGSGGVSSARRAA++ AKV +IE + LGGTCVNVGCVPKKVM+N+AHV +M++ AKN+G +DW +K RD Y+ RLNGIY RN+ SGV ++ G+ SFVG K V VEGVEYTADHILVAVGGRP MP I GA+ CIDS+GFF L EQP++VAV+GAGYIAVELAG+F++L T+T L +R DR +RT D L+ D L +E+
Sbjct: 64 HFDFLVIGGGSGGVSSARRAATYDAKVAVIEASA-LGGTCVNVGCVPKKVMWNSAHVMDMVNEAKNFGVVTSAGKVDWPTLKEARDTYITRLNGIYERNLGSSGVKIIEGYGSFVGPKTVQVEGVEYTADHILVAVGGRPTMPSIEGAEHCIDSNGFFQLEEQPKKVAVIGAGYIAVELAGVFHSLGTDTTLLVRRDRPLRTFDSLMVDTLMSEM 277
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: Q0A5L3_ALKEH (NADPH-glutathione reductase n=2 Tax=Ectothiorhodospiraceae TaxID=72276 RepID=Q0A5L3_ALKEH) HSP 1 Score: 275 bits (703), Expect = 8.570e-88 Identity = 133/211 (63.03%), Postives = 166/211 (78.67%), Query Frame = 1
Query: 16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDIL 648
HYD LV+GGGSGG+++ARRAAS+GAKV L+E + LGGTCVNVGCVPKKVM++AAH ++ +H A +YGF VG TLDW ++K RDAY+RRLNGIY RN++KSG+TL+ G A + V V G YTA HIL+A GGRP+ PDIPG +L IDSDGFF L++QPRRVAVVGAGYIAVELAG+ + L T T L +R + A+R+ DPL+ D L
Sbjct: 4 HYDLLVIGGGSGGMATARRAASYGAKVALVERS-RLGGTCVNVGCVPKKVMWSAAHTADALHRAADYGFRVGPATLDWAELKRRRDAYIRRLNGIYERNIDKSGITLLTGEARLADARTVEVNGERYTASHILLATGGRPSRPDIPGQELGIDSDGFFELAQQPRRVAVVGAGYIAVELAGVLHHLGTQTDLVVRREAALRSFDPLVRDSL 213
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S1K0G3_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K0G3_9ALVE) HSP 1 Score: 261 bits (668), Expect = 9.680e-84 Identity = 131/214 (61.21%), Postives = 165/214 (77.10%), Query Frame = 1
Query: 19 YDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
+DYLV+G GSGG++SARRAA +GAKV ++E LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GFTV + DW IK RD Y++RLNGIY RN+E SGV L+ G A+F G V V +Y+A +IL+AVGGRP MPDIPGA+ I+SDGFF L E P++VAVVGAGYIAVE+AGIFNAL ++T LF+R + A+R D +L LDAE+
Sbjct: 76 FDYLVIGAGSGGIASARRAAGYGAKVAVVERAA-LGGTCVNVGCVPKKVMFNAASINEMLHEANHHGFTVSS-SFDWSTIKTYRDNYIKRLNGIYFRNIENSGVKLIEGLATFTGPNSVRVGDRKYSAKNILIAVGGRPTMPDIPGAEHAINSDGFFQLEEMPKKVAVVGAGYIAVEMAGIFNALGSDTTLFVRGETALRKFDEMLRTHLDAEM 287
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A024TP36_9STRA (Glutathione reductase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP36_9STRA) HSP 1 Score: 265 bits (678), Expect = 3.100e-83 Identity = 134/223 (60.09%), Postives = 169/223 (75.78%), Query Frame = 1
Query: 19 YDYLVVGGGSGGVSSARRAASHGAKVCLIE-----GTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFT----VGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
YDY+V+GGGSGG++SARRAAS+GAKV ++E G LGGTCVNVGCVPKKVM+NAA ++E++H+AK Y F V + DW +K+ RDAYV RL+GIY RN+ K G++LV G A+FV + V+G ++TA HILVAVGG P +P IPG +L I SDGFFAL QPR+VAVVGAGYIAVELAGIFNAL T+T LF RHD+ +R DPL+ D ++ E+
Sbjct: 29 YDYIVLGGGSGGIASARRAASYGAKVLVVERGRTLGGAGLGGTCVNVGCVPKKVMYNAAFLAEIMHSAKTYTFKGVQGVEFGSFDWPAMKSKRDAYVTRLHGIYERNLAKDGISLVSGVAAFVDNHTIAVDGAKFTAPHILVAVGGTPQLPSIPGIELAISSDGFFALETQPRKVAVVGAGYIAVELAGIFNALQTDTTLFCRHDQVLRKFDPLVRDHVNKEM 251
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A0G4F1Z7_VITBC (Glutathione reductase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1Z7_VITBC) HSP 1 Score: 261 bits (668), Expect = 1.780e-81 Identity = 131/214 (61.21%), Postives = 165/214 (77.10%), Query Frame = 1
Query: 19 YDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
+DYLV+G GSGG++SARRAA +GAKV ++E LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GFTV + DW IK RD Y++RLNGIY RN+E SGV L+ G A+F G V V +Y+A +IL+AVGGRP MPDIPGA+ I+SDGFF L E P++VAVVGAGYIAVE+AGIFNAL ++T LF+R + A+R D +L LDAE+
Sbjct: 76 FDYLVIGAGSGGIASARRAAGYGAKVAVVERAA-LGGTCVNVGCVPKKVMFNAASINEMLHEANHHGFTVSS-SFDWSTIKTYRDNYIKRLNGIYFRNIENSGVKLIEGLATFTGPNSVRVGDRKYSAKNILIAVGGRPTMPDIPGAEHAINSDGFFQLEEMPKKVAVVGAGYIAVEMAGIFNALGSDTTLFVRGETALRKFDEMLRTHLDAEM 287
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S4IHV2_9EUKA (Glutathione reductase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHV2_9EUKA) HSP 1 Score: 259 bits (662), Expect = 2.240e-81 Identity = 125/215 (58.14%), Postives = 162/215 (75.35%), Query Frame = 1
Query: 16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
H+DYLV+GGGSGG++SARRAA+HGAKV +IE LGGTCVNVGCVPKKVMFN + ++ H A YGF +GE DW +IK RDAYV RLNGIY N++ SGVT + G A FVG K+V V GV Y+ ++IL+AVGG+P P +PG++L IDS+GFF L + P++V VVG+GYIAVELAGI L + L +R DR ++T+DPL+++ L AE+
Sbjct: 7 HFDYLVIGGGSGGMASARRAAAHGAKVAVIE-RERLGGTCVNVGCVPKKVMFNTGSLMQLFHQAGGYGFEIGEIKFDWAEIKKRRDAYVARLNGIYANNLKNSGVTFLEGDAKFVGPKEVDVGGVSYSGENILIAVGGKPLDPGVPGSELSIDSNGFFELEDVPKKVVVVGSGYIAVELAGILKLLGSEVDLLIRGDRPLKTMDPLVTEALVAEM 220
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S2V5Q9_9STRA (Glutathione reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q9_9STRA) HSP 1 Score: 260 bits (664), Expect = 4.270e-81 Identity = 130/217 (59.91%), Postives = 163/217 (75.12%), Query Frame = 1
Query: 10 GGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
G +DYLV+GGGSGG++SARRAA++GAKV +IE LGGTCVNVGCVPKKVM+N A ++E IHAA N+GF TLDW K+K RDAY+ RLNGIY N++ SGV L+ G FVG K+V V YTAD+IL+AVGG P MP +PGA+ CI SDGFFAL E P++VAV GAGYIAVELAGIF+AL +T L++R +R +R D +++ L E+
Sbjct: 49 GNKFDYLVIGGGSGGIASARRAATYGAKVAVIE-KQALGGTCVNVGCVPKKVMYNTASIAEAIHAAGNFGFDGVSGTLDWAKLKKSRDAYIERLNGIYMNNLKNSGVELITGTGKFVGPKEVQVGETTYTADNILIAVGGVPIMPSVPGAEHCISSDGFFALEEMPKKVAVFGAGYIAVELAGIFHALGVDTTLYVRGNRPLRAFDDMVAYALKDEM 264
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A0G4GMT1_9ALVE (Glutathione reductase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMT1_9ALVE) HSP 1 Score: 257 bits (657), Expect = 3.250e-80 Identity = 127/217 (58.53%), Postives = 166/217 (76.50%), Query Frame = 1
Query: 7 PGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAE 657
P H+DYLV+G GSGG++SARRAA+ GAKV + E LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GF V DW +K+ RD Y++RLNGIY N++ SG+TL+ G ASF G V V G EYTA +IL+AVGG+P PD+PGA+ CIDSDGFF L +QP++VAV+GAGYIAVE+AGIFNAL++ T LF R + +R+ D +++ L++E
Sbjct: 46 PDNHFDYLVIGAGSGGIASARRAATCGAKVAVAE-RQALGGTCVNVGCVPKKVMFNAASLNEMMHEAFHFGFDVSPK-FDWKFLKDARDKYIKRLNGIYGNNLKNSGITLLEGLASFTGPNTVSVGGKEYTAKNILIAVGGKPTRPDVPGAEHCIDSDGFFELEQQPKKVAVIGAGYIAVEIAGIFNALESETVLFTRGETVLRSFDSMVNGHLESE 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6104.13808.1 >prot_H-paniculata_contig6104.13808.1 ID=prot_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp GGPGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCback to top mRNA from alignment at H-paniculata_contig6104:352..3879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6104.13808.1 ID=mRNA_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig6104:352..3879- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6104:352..3879- >mRNA_H-paniculata_contig6104.13808.1 ID=mRNA_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig6104:352..3879- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |