mRNA_H-paniculata_contig6104.13808.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6104.13808.1
Unique NamemRNA_H-paniculata_contig6104.13808.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: D8LHC1_ECTSI (Glutathione reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC1_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 5.270e-130
Identity = 182/220 (82.73%), Postives = 206/220 (93.64%), Query Frame = 1
Query:    1 GGPGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            GGPGGHYDYLV+GGGSGGVSSARRAASHGAKV LIEGTPNLGGTCVNVGCVPKKVMFNAAH++EM+HA+K+YG+TVGE + DW K+K MRDAYVRRLNGIYHRNVEKSGVTLVYG A FVG KK VVEGVEYTADH+++AVGG P+MPD+PGA+LCI+SDGFF ++EQP++VAVVGAGYIAVELAGIF+AL T THLF+RH+RAMRTLDPLLSDILD E+
Sbjct:   13 GGPGGHYDYLVIGGGSGGVSSARRAASHGAKVALIEGTPNLGGTCVNVGCVPKKVMFNAAHINEMLHASKHYGYTVGETSFDWGKLKEMRDAYVRRLNGIYHRNVEKSGVTLVYGMAKFVGPKKAVVEGVEYTADHVMIAVGGTPSMPDVPGAELCINSDGFFDVTEQPKKVAVVGAGYIAVELAGIFDALGTETHLFIRHERAMRTLDPLLSDILDLEM 232          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A836CAZ0_9STRA (Glutathione reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ0_9STRA)

HSP 1 Score: 299 bits (765), Expect = 6.910e-97
Identity = 135/215 (62.79%), Postives = 174/215 (80.93%), Query Frame = 1
Query:   16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            H+D +V+GGGSGG++ ARRAA +G K  +IE T  LGGTCVNVGCVPKK+MFN A  +EM+H  ++YG+ V +++ DW KIK MRDAY+R+LNGIY  NVE++G+  + G A+FVG K + V+ V+YTA+HI++AVGG+P MPDIPGA+LCIDS+GFFA+  QP R+AVVGAGYIAVELAGIFNAL TNTHLF+RHDR +RT DP ++  L  E+
Sbjct:    8 HFDLIVIGGGSGGMACARRAAQYGCKAAIIEATSKLGGTCVNVGCVPKKIMFNTAAFNEMLHGGRHYGYDVRDYSFDWGKIKTMRDAYIRKLNGIYMSNVERAGIAFISGFAAFVGPKTLQVDDVQYTAEHIVIAVGGQPTMPDIPGAELCIDSNGFFAMETQPERIAVVGAGYIAVELAGIFNALGTNTHLFVRHDRPLRTFDPTITSALLTEI 222          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A6H5JRG6_9PHAE (Glutathione reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG6_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 7.490e-89
Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 1
Query:   16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            H+D+LV+GGGSGGVSSARRAA++ AKV +IE +  LGGTCVNVGCVPKKVM+N+AHV +M++ AKN+G       +DW  +K  RD Y+ RLNGIY RN+  SGV ++ G+ SFVG K V VEGVEYTADHILVAVGGRP MP I GA+ CIDS+GFF L EQP++VAV+GAGYIAVELAG+F++L T+T L +R DR +RT D L+ D L +E+
Sbjct:   64 HFDFLVIGGGSGGVSSARRAATYDAKVAVIEASA-LGGTCVNVGCVPKKVMWNSAHVMDMVNEAKNFGVVTSAGKVDWPTLKEARDTYITRLNGIYERNLGSSGVKIIEGYGSFVGPKTVQVEGVEYTADHILVAVGGRPTMPSIEGAEHCIDSNGFFQLEEQPKKVAVIGAGYIAVELAGVFHSLGTDTTLLVRRDRPLRTFDSLMVDTLMSEM 277          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: Q0A5L3_ALKEH (NADPH-glutathione reductase n=2 Tax=Ectothiorhodospiraceae TaxID=72276 RepID=Q0A5L3_ALKEH)

HSP 1 Score: 275 bits (703), Expect = 8.570e-88
Identity = 133/211 (63.03%), Postives = 166/211 (78.67%), Query Frame = 1
Query:   16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDIL 648
            HYD LV+GGGSGG+++ARRAAS+GAKV L+E +  LGGTCVNVGCVPKKVM++AAH ++ +H A +YGF VG  TLDW ++K  RDAY+RRLNGIY RN++KSG+TL+ G A     + V V G  YTA HIL+A GGRP+ PDIPG +L IDSDGFF L++QPRRVAVVGAGYIAVELAG+ + L T T L +R + A+R+ DPL+ D L
Sbjct:    4 HYDLLVIGGGSGGMATARRAASYGAKVALVERS-RLGGTCVNVGCVPKKVMWSAAHTADALHRAADYGFRVGPATLDWAELKRRRDAYIRRLNGIYERNIDKSGITLLTGEARLADARTVEVNGERYTASHILLATGGRPSRPDIPGQELGIDSDGFFELAQQPRRVAVVGAGYIAVELAGVLHHLGTQTDLVVRREAALRSFDPLVRDSL 213          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S1K0G3_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K0G3_9ALVE)

HSP 1 Score: 261 bits (668), Expect = 9.680e-84
Identity = 131/214 (61.21%), Postives = 165/214 (77.10%), Query Frame = 1
Query:   19 YDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            +DYLV+G GSGG++SARRAA +GAKV ++E    LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GFTV   + DW  IK  RD Y++RLNGIY RN+E SGV L+ G A+F G   V V   +Y+A +IL+AVGGRP MPDIPGA+  I+SDGFF L E P++VAVVGAGYIAVE+AGIFNAL ++T LF+R + A+R  D +L   LDAE+
Sbjct:   76 FDYLVIGAGSGGIASARRAAGYGAKVAVVERAA-LGGTCVNVGCVPKKVMFNAASINEMLHEANHHGFTVSS-SFDWSTIKTYRDNYIKRLNGIYFRNIENSGVKLIEGLATFTGPNSVRVGDRKYSAKNILIAVGGRPTMPDIPGAEHAINSDGFFQLEEMPKKVAVVGAGYIAVEMAGIFNALGSDTTLFVRGETALRKFDEMLRTHLDAEM 287          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A024TP36_9STRA (Glutathione reductase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP36_9STRA)

HSP 1 Score: 265 bits (678), Expect = 3.100e-83
Identity = 134/223 (60.09%), Postives = 169/223 (75.78%), Query Frame = 1
Query:   19 YDYLVVGGGSGGVSSARRAASHGAKVCLIE-----GTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFT----VGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            YDY+V+GGGSGG++SARRAAS+GAKV ++E     G   LGGTCVNVGCVPKKVM+NAA ++E++H+AK Y F     V   + DW  +K+ RDAYV RL+GIY RN+ K G++LV G A+FV    + V+G ++TA HILVAVGG P +P IPG +L I SDGFFAL  QPR+VAVVGAGYIAVELAGIFNAL T+T LF RHD+ +R  DPL+ D ++ E+
Sbjct:   29 YDYIVLGGGSGGIASARRAASYGAKVLVVERGRTLGGAGLGGTCVNVGCVPKKVMYNAAFLAEIMHSAKTYTFKGVQGVEFGSFDWPAMKSKRDAYVTRLHGIYERNLAKDGISLVSGVAAFVDNHTIAVDGAKFTAPHILVAVGGTPQLPSIPGIELAISSDGFFALETQPRKVAVVGAGYIAVELAGIFNALQTDTTLFCRHDQVLRKFDPLVRDHVNKEM 251          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A0G4F1Z7_VITBC (Glutathione reductase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1Z7_VITBC)

HSP 1 Score: 261 bits (668), Expect = 1.780e-81
Identity = 131/214 (61.21%), Postives = 165/214 (77.10%), Query Frame = 1
Query:   19 YDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            +DYLV+G GSGG++SARRAA +GAKV ++E    LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GFTV   + DW  IK  RD Y++RLNGIY RN+E SGV L+ G A+F G   V V   +Y+A +IL+AVGGRP MPDIPGA+  I+SDGFF L E P++VAVVGAGYIAVE+AGIFNAL ++T LF+R + A+R  D +L   LDAE+
Sbjct:   76 FDYLVIGAGSGGIASARRAAGYGAKVAVVERAA-LGGTCVNVGCVPKKVMFNAASINEMLHEANHHGFTVSS-SFDWSTIKTYRDNYIKRLNGIYFRNIENSGVKLIEGLATFTGPNSVRVGDRKYSAKNILIAVGGRPTMPDIPGAEHAINSDGFFQLEEMPKKVAVVGAGYIAVEMAGIFNALGSDTTLFVRGETALRKFDEMLRTHLDAEM 287          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S4IHV2_9EUKA (Glutathione reductase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHV2_9EUKA)

HSP 1 Score: 259 bits (662), Expect = 2.240e-81
Identity = 125/215 (58.14%), Postives = 162/215 (75.35%), Query Frame = 1
Query:   16 HYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            H+DYLV+GGGSGG++SARRAA+HGAKV +IE    LGGTCVNVGCVPKKVMFN   + ++ H A  YGF +GE   DW +IK  RDAYV RLNGIY  N++ SGVT + G A FVG K+V V GV Y+ ++IL+AVGG+P  P +PG++L IDS+GFF L + P++V VVG+GYIAVELAGI   L +   L +R DR ++T+DPL+++ L AE+
Sbjct:    7 HFDYLVIGGGSGGMASARRAAAHGAKVAVIE-RERLGGTCVNVGCVPKKVMFNTGSLMQLFHQAGGYGFEIGEIKFDWAEIKKRRDAYVARLNGIYANNLKNSGVTFLEGDAKFVGPKEVDVGGVSYSGENILIAVGGKPLDPGVPGSELSIDSNGFFELEDVPKKVVVVGSGYIAVELAGILKLLGSEVDLLIRGDRPLKTMDPLVTEALVAEM 220          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A7S2V5Q9_9STRA (Glutathione reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q9_9STRA)

HSP 1 Score: 260 bits (664), Expect = 4.270e-81
Identity = 130/217 (59.91%), Postives = 163/217 (75.12%), Query Frame = 1
Query:   10 GGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAEV 660
            G  +DYLV+GGGSGG++SARRAA++GAKV +IE    LGGTCVNVGCVPKKVM+N A ++E IHAA N+GF     TLDW K+K  RDAY+ RLNGIY  N++ SGV L+ G   FVG K+V V    YTAD+IL+AVGG P MP +PGA+ CI SDGFFAL E P++VAV GAGYIAVELAGIF+AL  +T L++R +R +R  D +++  L  E+
Sbjct:   49 GNKFDYLVIGGGSGGIASARRAATYGAKVAVIE-KQALGGTCVNVGCVPKKVMYNTASIAEAIHAAGNFGFDGVSGTLDWAKLKKSRDAYIERLNGIYMNNLKNSGVELITGTGKFVGPKEVQVGETTYTADNILIAVGGVPIMPSVPGAEHCISSDGFFALEEMPKKVAVFGAGYIAVELAGIFHALGVDTTLYVRGNRPLRAFDDMVAYALKDEM 264          
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Match: A0A0G4GMT1_9ALVE (Glutathione reductase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMT1_9ALVE)

HSP 1 Score: 257 bits (657), Expect = 3.250e-80
Identity = 127/217 (58.53%), Postives = 166/217 (76.50%), Query Frame = 1
Query:    7 PGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGCVPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGIYHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDIPGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLRHDRAMRTLDPLLSDILDAE 657
            P  H+DYLV+G GSGG++SARRAA+ GAKV + E    LGGTCVNVGCVPKKVMFNAA ++EM+H A ++GF V     DW  +K+ RD Y++RLNGIY  N++ SG+TL+ G ASF G   V V G EYTA +IL+AVGG+P  PD+PGA+ CIDSDGFF L +QP++VAV+GAGYIAVE+AGIFNAL++ T LF R +  +R+ D +++  L++E
Sbjct:   46 PDNHFDYLVIGAGSGGIASARRAATCGAKVAVAE-RQALGGTCVNVGCVPKKVMFNAASLNEMMHEAFHFGFDVSPK-FDWKFLKDARDKYIKRLNGIYGNNLKNSGITLLEGLASFTGPNTVSVGGKEYTAKNILIAVGGKPTRPDVPGAEHCIDSDGFFELEQQPKKVAVIGAGYIAVEIAGIFNALESETVLFTRGETVLRSFDSMVNGHLESE 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6104.13808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHC1_ECTSI5.270e-13082.73Glutathione reductase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CAZ0_9STRA6.910e-9762.79Glutathione reductase n=1 Tax=Tribonema minus TaxI... [more]
A0A6H5JRG6_9PHAE7.490e-8963.26Glutathione reductase n=1 Tax=Ectocarpus sp. CCAP ... [more]
Q0A5L3_ALKEH8.570e-8863.03NADPH-glutathione reductase n=2 Tax=Ectothiorhodos... [more]
A0A7S1K0G3_9ALVE9.680e-8461.21Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A024TP36_9STRA3.100e-8360.09Glutathione reductase n=2 Tax=Aphanomyces invadans... [more]
A0A0G4F1Z7_VITBC1.780e-8161.21Glutathione reductase n=1 Tax=Vitrella brassicafor... [more]
A0A7S4IHV2_9EUKA2.240e-8158.14Glutathione reductase n=1 Tax=Prymnesium polylepis... [more]
A0A7S2V5Q9_9STRA4.270e-8159.91Glutathione reductase n=1 Tax=Fibrocapsa japonica ... [more]
A0A0G4GMT1_9ALVE3.250e-8058.53Glutathione reductase n=1 Tax=Chromera velia CCMP2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6104contigH-paniculata_contig6104:352..3879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score383.6
Seed ortholog evalue6e-104
Seed eggNOG ortholog2880.D8LHC1
KEGG rclassRC00011
KEGG koko:K00383
KEGG ReactionR00094,R00115
KEGG Pathwayko00480,ko04918,map00480,map04918
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glutathione-disulfide reductase activity
EggNOG OGsCOG1249@1,KOG0405@2759
Ec32 ortholog descriptionGlutathione reductase
Ec32 orthologEc-24_001330.1
EC1.8.1.7
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size660
Cds size660
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6104.13808.1prot_H-paniculata_contig6104.13808.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6104 352..3879 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930686.111409-CDS-H-paniculata_contig6104:351..5351622930686.111409-CDS-H-paniculata_contig6104:351..535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 352..535 -
1691481405.8613167-CDS-H-paniculata_contig6104:351..5351691481405.8613167-CDS-H-paniculata_contig6104:351..535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 352..535 -
1622930686.128466-CDS-H-paniculata_contig6104:1067..11981622930686.128466-CDS-H-paniculata_contig6104:1067..1198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 1068..1198 -
1691481405.8742673-CDS-H-paniculata_contig6104:1067..11981691481405.8742673-CDS-H-paniculata_contig6104:1067..1198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 1068..1198 -
1622930686.1474082-CDS-H-paniculata_contig6104:1707..18601622930686.1474082-CDS-H-paniculata_contig6104:1707..1860Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 1708..1860 -
1691481405.8835292-CDS-H-paniculata_contig6104:1707..18601691481405.8835292-CDS-H-paniculata_contig6104:1707..1860Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 1708..1860 -
1622930686.164754-CDS-H-paniculata_contig6104:2622..26911622930686.164754-CDS-H-paniculata_contig6104:2622..2691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 2623..2691 -
1691481405.8986478-CDS-H-paniculata_contig6104:2622..26911691481405.8986478-CDS-H-paniculata_contig6104:2622..2691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 2623..2691 -
1622930686.1995227-CDS-H-paniculata_contig6104:3756..38791622930686.1995227-CDS-H-paniculata_contig6104:3756..3879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 3757..3879 -
1691481405.9082499-CDS-H-paniculata_contig6104:3756..38791691481405.9082499-CDS-H-paniculata_contig6104:3756..3879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6104 3757..3879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6104.13808.1

>prot_H-paniculata_contig6104.13808.1 ID=prot_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
GGPGGHYDYLVVGGGSGGVSSARRAASHGAKVCLIEGTPNLGGTCVNVGC
VPKKVMFNAAHVSEMIHAAKNYGFTVGEHTLDWLKIKNMRDAYVRRLNGI
YHRNVEKSGVTLVYGHASFVGEKKVVVEGVEYTADHILVAVGGRPAMPDI
PGADLCIDSDGFFALSEQPRRVAVVGAGYIAVELAGIFNALDTNTHLFLR
HDRAMRTLDPLLSDILDAEV
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mRNA from alignment at H-paniculata_contig6104:352..3879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6104.13808.1 ID=mRNA_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig6104:352..3879- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGGACCCGGCGGTCACTATGACTATCTTGTTGTCGGCGGCGGCAGCGG GGGGGTATCTAGCGCACGCCGCGCAGCTTCTCATGGAGCGAAGGTTTGCC TCATCGAGGGCACTCCCAACTTGGTGAGTACACTTATGACCCGTACATTT CTTGATAGTATTGGACACGGTATTAGTGTAACGGTACATTGGCGTGGTTA TATGCCCGGCCCCTTCGGAAGTGGAAATGTTGAATGATGCGTAGGGTCGT GCTGATATCGATCGGCGTAATGAAATCGAAGAACTAGAAGAACTATACCA TGTTATGGAATTTTTTTCAAGAGGCATTTTGGGCGTGTTTGTGTTCGAGG GCATGAGGGGTGATTGTCTTGTTGGGGGTGTCCAATGTGCATAGTATTGT CCAGTTCTTGAGCGTTCCCATGTTCCTCCAGCACAAAGCACAGTCCTTTT CTGCACTTCAGAGTAAGATGAGAAATATATACGTCTCGGTCGCATTACTT TTATAATTTTTTTTCAAAGCTGTTACTGTATCAGAACTGCAGCGAGCTTT ACCAGGAAGTGAGTTCGACTGATTGGTACGGCTCTACGGCATATCCCTGA TGGAGGCAACGTTCGATAGTGTTGACGTTCGATTATGTTCGATGATGTGA ACATTCGATTGTGTTAACGTTTTCATGGTGCTGCGCATTCACCAGCACCA GCACCAGCGCCAGCATTAAGGTCACATTGGATTGATAGGCTTTGAAAACT TGATTTTTGTTTGTACAGTAAAACAAAGTGCTTGCTACAACCGTACACCG AAAACATGGTGAGATTAAGAACTGGTGCTCTTCGTCTCGAGAAAATCGTG TAAAACCACTCAAGTTTCTGATGCTGCTCGACCTTCGTTTTTCCTCGTCC AATTTTTGGCGAGAGAGAGCGTTTGCAGACACTAAACTAAGGCCTCGAGG AACGGAGAAGTGGGCTAGCCTCCTCTTGTTGACTTGATCAAGAAGTAATG TTGTGGTATCGAAAACAAAAACCTTGGTGGTCGTCCCGAAATCAATTTTC CGACACAATCTTTTCGATGTTTATCAGATGATGTGGTGCCCTAAAAACAG GAAATAGTTAGTATACAACGTGCATAATGATCTGTACTGAATCCGTGCAT CCACCCGTCGCTGCTTGTTCCGCTGACGCTCCTGACAGGGTGGTACTTGC GTGAACGTGGGGTGTGTGCCCAAGAAGGTCATGTTCAACGCTGCTCACGT CAGCGAGGTATGTGGGTACATGGCTCTAGTACATTTCTTGATACGTGAGG CGTAGCAACATGAACAAGGAGCCCATTGAATCTGCAGTTTACAGTACAAG ACAAAAGAGTAGAAGATAGATTTCGTTGCTACGTTGTGTTCTCTGTTGCT TTTCCGAATCGCCACATGTACACATTTACATCTCTTGTAGCTCTACACTA ATACCTATATCCAAGTTTCATTCCACTTACAAACAGCATCACTGTACGTA CTTGTTATGAGATGCTGCTCGAAGAGCTAATGAATGCTGAGTCGAGGGCG CGATGACCATCAAATGCGTAGAGATTGCCTTTTTTTTTCTGTGCTGCACA TCAGCAGTTATTGTTGTCATCAGCGCAGCAGATAAACACAAGGCTGGTAG GCCACTTCACCGTGTAGGATGCGCTTGTTAAACACTTATCCCAATCGACT CCAATTTATGCCGCACTCGAGTTGATGGTGTAGCTTAATAAATGCTTGCT GGCATGAGACCATTGCCCATCACAATATCATAGCTACGTCCCCTTGGTCA CCTAGCTTGATGAATGCATCTCCACGTGAGGCTTTCTTCTCAACCGGAAC AGCAACAACTAGCGACATGGGTAGTACCCAACCGAAAATCACATGCAGTA CTACAGAGAATGACTAATGTTCCGCTACGTCCAATTGCGACCGAAAAACG TTGATGGTAACGCCCGGCTCATGTTGTCATACTCCAATATCCTTGGATCC TCTTGCATGTTGGTTGCAGATGATTCACGCTGCGAAAAACTACGGCTTCA CTGTGGGTGAGCACACGCTCGACTGGCTTAAGATCAAGAACATGCGTGAC GCCTATGTTCGGCGGTTGAATGGAATCTACCACCGCAACGTAGAGAAGTC CGGGGTTACCCTCGTCTATGGGGTGAGCCAGATGTGCAATCTATATATAC TAATGACATGCATGTGCTGAAGGGATTAGAGAAATCACTACATGTGTTTC TGTTTGGATGGAAGAATGGATAATACCGTACATGCGAAAAAAATTATGTG TACAGGAGGTGGTCAAGTGGCCGAATTTGAGTTGTAGAGTTCTTACTTAC AATTGGTGATGGAAAGAGACACAGGACACGAGGCGTGAAGTTAACGCTAC TAGTAGTATAGTTCGACATTTTGTGTTATTCTTTACCCACTTTCGTATTT ATTCACCAAAGCTATGGAGCACTAGACACTTCAACGGGTCCTTGTGTTGG TGTTGGTAATCTCCGTATACAAATGCTGCATCTGTCCCACGATGAGAACA AGATGGGTACTAACAACATACTGTGCTTGTAGTTAGGAGTTTTGCCCAAT CTCGTGTCGAGGTATATACGACTTTCTTACCTGTAATAACTTTGTATTTG TTATTATTCATGCCCATCATCCGCCACACAGCATGCCTCTTTCGTTGGGG AGAAGAAAGTCGTGGTGGAAGGCGTGGAGTACACAGCGGATCATATCCTT GTGGCGGTTGGGGGGAGGCCGGCGATGCCTGACATTCCCGGGGCGGATCT CTGTATCGACAGGTACAGTCGTAACATTTGTAATAACTCTTGATCCTTAA CCGTTGGGCGAATCATCCTGTGGATCATGACCGAGATATGCTCTTGGGAT CTTTGATGCCGCTAAAACGGTATACATGAATGATTCAGAAACGTAACACT TGTTGTATATTCACGCCGACCCGCAGGACTCAGGCAGGCCTTAAACACCG ATAGAGCATGCCTGTATTGAAGCATTTTTGTTTGTAATCGTCGCTTTTGC AGTTGGTAACTGAATCTCGAAATGCGATCAGAGCCTTATCTGTCTTCACC CGTAGTCTCAGATCATTTTTGATTGGCGAACGGATTTGACTACGAAACGA GCACGGGCAATGCAAGCTGCTAGGCTTTCTTCATACACACCGTTAACGTA AGGCTTGGTTGTTTGTATCGGAGCAACTGTTCTGATGAAGCTAATTTCAT GAAATGAAGAACAAATGTCAACCTTGAACTGCTTTCGTTTAACGCCACAA CACTGATACTCGTTCTTTTTTATAATGCAATGCTGATGCCACAGTGATGG ATTCTTCGCTCTGTCGGAGCAGCCGCGGCGAGTGGCCGTGGTGGGAGCAG GGTACATCGCCGTAGAACTTGCTGGCATCTTCAATGCACTTGACACCAAC ACCCACCTCTTCCTTCGGCACGACCGCGCGATGCGCACGCTGGACCCTCT CCTCAGTGATATCCTAGATGCAGAGGTA
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Coding sequence (CDS) from alignment at H-paniculata_contig6104:352..3879-

>mRNA_H-paniculata_contig6104.13808.1 ID=mRNA_H-paniculata_contig6104.13808.1|Name=mRNA_H-paniculata_contig6104.13808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig6104:352..3879- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGGACCCGGCGGTCACTATGACTATCTTGTTGTCGGCGGCGGCAGCGG
GGGGGTATCTAGCGCACGCCGCGCAGCTTCTCATGGAGCGAAGGTTTGCC
TCATCGAGGGCACTCCCAACTTGGGTGGACCCGGCGGTCACTATGACTAT
CTTGTTGTCGGCGGCGGCAGCGGGGGGGTATCTAGCGCACGCCGCGCAGC
TTCTCATGGAGCGAAGGTTTGCCTCATCGAGGGCACTCCCAACTTGGGTG
GTACTTGCGTGAACGTGGGGTGTGTGCCCAAGAAGGTCATGTTCAACGCT
GCTCACGTCAGCGAGGGTGGTACTTGCGTGAACGTGGGGTGTGTGCCCAA
GAAGGTCATGTTCAACGCTGCTCACGTCAGCGAGATGATTCACGCTGCGA
AAAACTACGGCTTCACTGTGGGTGAGCACACGCTCGACTGGCTTAAGATC
AAGAACATGCGTGACGCCTATGTTCGGCGGTTGAATGGAATCTACCACCG
CAACGTAGAGAAGTCCGGGGTTACCCTCGTCTATGGGATGATTCACGCTG
CGAAAAACTACGGCTTCACTGTGGGTGAGCACACGCTCGACTGGCTTAAG
ATCAAGAACATGCGTGACGCCTATGTTCGGCGGTTGAATGGAATCTACCA
CCGCAACGTAGAGAAGTCCGGGGTTACCCTCGTCTATGGGCATGCCTCTT
TCGTTGGGGAGAAGAAAGTCGTGGTGGAAGGCGTGGAGTACACAGCGGAT
CATATCCTTGTGGCGGTTGGGGGGAGGCCGGCGATGCCTGACATTCCCGG
GGCGGATCTCTGTATCGACAGCATGCCTCTTTCGTTGGGGAGAAGAAAGT
CGTGGTGGAAGGCGTGGAGTACACAGCGGATCATATCCTTGTGGCGGTTG
GGGGGAGGCCGGCGATGCCTGACATTCCCGGGGCGGATCTCTGTATCGAC
AGTGATGGATTCTTCGCTCTGTCGGAGCAGCCGCGGCGAGTGGCCGTGGT
GGGAGCAGGGTACATCGCCGTAGAACTTGCTGGCATCTTCAATGCACTTG
ACACCAACACCCACCTCTTCCTTCGGCACGACCGCGCGATGCGCACGCTG
GACCCTCTCCTCAGTGATATCCTAGATGCAGAGGTATGATGGATTCTTCG
CTCTGTCGGAGCAGCCGCGGCGAGTGGCCGTGGTGGGAGCAGGGTACATC
GCCGTAGAACTTGCTGGCATCTTCAATGCACTTGACACCAACACCCACCT
CTTCCTTCGGCACGACCGCGCGATGCGCACGCTGGACCCTCTCCTCAGTG
ATATCCTAGATGCAGAGGTA
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