prot_H-paniculata_contig61000.13804.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A151T234_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T234_CAJCA) HSP 1 Score: 55.5 bits (132), Expect = 3.110e-7 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSP-APVARTKMVSLLAAIQDWELRYVDFEQAYL 70
+YK K DG +E+Y+ RLV+ G Q++D+ F + SP A + +M+ LA+I +W L+ +D A+L
Sbjct: 631 VYKVKHNADGTIERYKARLVSKGYNQLEDLDFLDTFSPVAKITTFRMLLALASINNWYLKQLDVNNAFL 699
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: UPI000B8AF143 (uncharacterized protein LOC110794847 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AF143) HSP 1 Score: 51.6 bits (122), Expect = 8.360e-7 Identity = 22/69 (31.88%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSP-APVARTKMVSLLAAIQDWELRYVDFEQAYL 70
+YK + +DG +E+ + RLVA G+RQ+K+ +++ SP A + +M+ LA +++W++ +D A++
Sbjct: 31 VYKVNLNKDGFLERLKARLVARGDRQMKEKYYKHTFSPVANFSTVRMLVALATLRNWKVHQLDINNAFM 99
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A5B5T2_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B5T2_VITVI) HSP 1 Score: 53.9 bits (128), Expect = 1.100e-6 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPAPVART-KMVSLLAAIQDWELRYVDFEQAYL 70
I++ K DG +++Y+ RLVA G +Q + F + SP A T ++V LA +WE+R +DF A+L
Sbjct: 538 IFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFL 606
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A2S6BTL3_9PEZI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cercospora berteroae TaxID=357750 RepID=A0A2S6BTL3_9PEZI) HSP 1 Score: 53.5 bits (127), Expect = 1.440e-6 Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
Query: 2 MIYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEA-SSPAPVARTKMVSLLAAIQDWELRYVDFEQAYL 70
++Y+RKIG+DGKV KY+ RLVA G +Q + F E S A + + L A W+ +DF A+L
Sbjct: 115 LVYRRKIGKDGKVSKYKVRLVARGFQQREGFDFTETYSGVVKTAAYRTIFALMAALGWKCHQMDFVTAFL 184
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A2K3N6U7_TRIPR (Retrotransposon-related protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N6U7_TRIPR) HSP 1 Score: 53.5 bits (127), Expect = 1.450e-6 Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPAPVART---KMVSLLAAIQDWELRYVDFEQAYL 70
IYK K+ E GKVEKY+ RL+A G Q I+F+E APVAR + V +AA + W L +D + A+L
Sbjct: 62 IYKTKLNEKGKVEKYKARLIAKGYSQQYGIYFKEVF--APVARRDTIRTVLSIAASKSWILYQLDVKSAFL 130
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A5BFQ2_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BFQ2_VITVI) HSP 1 Score: 53.1 bits (126), Expect = 2.000e-6 Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPAPVART-KMVSLLAAIQDWELRYVDFEQAYL 70
I++ K DG +++Y+ RLVA G +Q + F + +P A T ++V LA +WE+R +DF A+L
Sbjct: 189 IFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFNPVIKASTIRVVFTLAVTYNWEIRQIDFNNAFL 257
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A438FXI0_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FXI0_VITVI) HSP 1 Score: 53.1 bits (126), Expect = 2.050e-6 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPAPVART-KMVSLLAAIQDWELRYVDFEQAYL 70
I++ K DG +++Y+ RLVA G +Q + F + SP A T ++V LA +WE+R +DF A+L
Sbjct: 608 IFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFIDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFL 676
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A2I0HGX5_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0HGX5_PUNGR) HSP 1 Score: 49.7 bits (117), Expect = 2.320e-6 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
Query: 2 MIYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSP 40
+++KRKIG DGKVE Y+ RLVA G RQ +++ ++E SP
Sbjct: 30 LVFKRKIGADGKVETYKARLVAKGYRQRQEVDYEETFSP 68
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: A0A2K3MWU3_TRIPR (Copia-type polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MWU3_TRIPR) HSP 1 Score: 52.8 bits (125), Expect = 2.820e-6 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPAPVAR---TKMVSLLAAIQDWELRYVDFEQAYL 70
IYK K+ E GKVEKY+ RLVA G Q I F+E APVAR + V +AA + W + +D + A+L
Sbjct: 863 IYKTKLNEKGKVEKYKARLVAKGYSQQYGIDFKEVF--APVARWDTIRTVLSIAASESWTVYQLDVKSAFL 931
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Match: UPI000CED7874 (uncharacterized protein LOC112098012 n=1 Tax=Citrus clementina TaxID=85681 RepID=UPI000CED7874) HSP 1 Score: 51.2 bits (121), Expect = 2.960e-6 Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
Query: 3 IYKRKIGEDGKVEKYQCRLVAHGNRQIKDIHFQEASSPA-PVARTKMVSLLAAIQDWELRYVDFEQAYL 70
+Y+ K DG V KY+ RLVA G +QI ++ E SP A +++ LA + W++R VD A+L
Sbjct: 70 VYRAKYNTDGSVAKYKARLVAKGFQQIMGVNCFETFSPVIKPATVRVILSLAVMNQWKIRQVDVNNAFL 138 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61000.13804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig61000.13804.1 ID=prot_H-paniculata_contig61000.13804.1|Name=mRNA_H-paniculata_contig61000.13804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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