mRNA_H-paniculata_contig610.13800.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig610.13800.1
Unique NamemRNA_H-paniculata_contig610.13800.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A6H5KDB9_9PHAE (AMP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB9_9PHAE)

HSP 1 Score: 548 bits (1413), Expect = 4.640e-184
Identity = 264/348 (75.86%), Postives = 297/348 (85.34%), Query Frame = 2 
Query:  272 EDNGSGVKRSRQ-PRSPIQGAPSSTPTVAPPDVHSTVGEFPVDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            E  G+  KRS++ PR      PS  P +   ++H TVGE+PVDYTMH  NRAK+I+R+R  DGV  R VLL RGG++A+RDETD EP+FRQESTFHYLFGVREPDCLATIDLET KATL+IPRLPA YATWMG ILPP HFQ VYKVD+VLFV E AS+I +  P+KVYL+KGYNTDGKAWS PAS  GLDGL+ D+S+ LYDA+VECRVIK+ +EI++MQHI NLSSEAHFEVMRRT+PGMREYQLESMFRHWVYYNGGCRH AYTSIC CGPNSAVLHYGHAGAPND TIGENDMLLLDMGGEYHCY SDITCSFPANGKF+ DQ+M+FEAV DMAF VMD+MKPG
Sbjct:   30 ETIGAAAKRSKKNPR-----VPSEMPAL---ELHPTVGEYPVDYTMHAENRAKVINRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAVYATWMGEILPPKHFQDVYKVDQVLFVDELASTIKKGQPQKVYLNKGYNTDGKAWSAPASVDGLDGLETDSSTTLYDAIVECRVIKTKKEIDIMQHITNLSSEAHFEVMRRTRPGMREYQLESMFRHWVYYNGGCRHTAYTSICGCGPNSAVLHYGHAGAPNDRTIGENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPG 369
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A7S1CA66_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA66_9STRA)

HSP 1 Score: 348 bits (894), Expect = 6.080e-107
Identity = 160/309 (51.78%), Postives = 220/309 (71.20%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDG--VPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            +D+++H  NRA ++  ++   G  VP ++V+L +GG++ +RD+TD EPLFRQES FHYLFGVREPDC   ID+ T  ATL+IPRLP  YATWMG ILPP HFQ  Y VD VLFV E  +++  + P  +Y  +G N+D   ++  A+  G++    D + +LY+AVVE RVIKS +E+ +++++  ++ +AH  VM   +PG+ EYQLES+FRHW YY+GG R+ +YT IC  G N A LHYGHAGAPND  + + DM L DMG EYHCY SD+TCSFPANG F+ DQR+++EAV+     V+D++KPG
Sbjct:   25 IDFSLHARNRAAVVDNLKRFGGATVPEKAVILVQGGVAETRDDTDHEPLFRQESNFHYLFGVREPDCFGAIDVATGAATLFIPRLPDVYATWMGDILPPAHFQAAYGVDTVLFVDELDAALTAMAPTVLYTLRGLNSDSGNYAKEAAFDGIEKHRVD-NGLLYEAVVEARVIKSADELALLRYVNAVTCDAHMAVMAHCRPGLLEYQLESLFRHWCYYHGGARNMSYTCICGTGKNGATLHYGHAGAPNDKRVEDGDMCLFDMGCEYHCYASDVTCSFPANGVFTKDQRLIYEAVLAAQRAVLDALKPG 332
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A4D9D6F9_9STRA (AMP_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6F9_9STRA)

HSP 1 Score: 342 bits (878), Expect = 2.050e-104
Identity = 172/334 (51.50%), Postives = 226/334 (67.66%), Query Frame = 2 
Query:  359 PDVHSTVGEFPVDYTMHKTNRAKLISRM-RGLDGVPVRSVL-LFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEID-PEKVYLHKGYNTDGKAWSTPASTKGLD-------------GLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            P + +T+    V  +M+  NR KL +R+   L     + +L L  GG    R ++D E +FRQES F YLFGV+EP    +ID+ T   TLY+PRLP EYA WMG I PP+HFQ +Y+VDRVLFV E A++++  + P+ + L++G NTD  + + PAS +G+               L CD  S LYD +VECRV KSP E+ ++Q++ ++SS+AH  VM++ KPGM EYQLES+F H  YY GGCRH AYTSIC CGPN+A LHYGHAGAPND  I + DMLLLDMG E+ CY SDITCSFPA+G FS DQ+M+F+ V  M F VMD+++PG
Sbjct:   39 PTLTATMPPIEVPMSMYAENRQKLCARLLEKLSNAREKKLLVLMEGGKEEYRYDSDAEKIFRQESWFAYLFGVKEPGFYGSIDVNTGYTTLYMPRLPVEYAVWMGRIQPPSHFQAMYEVDRVLFVDELAATLLGPERPDTLLLNRGLNTDSGSTAKPASVEGVTTPPKEGNGAQAGKALPCDYDS-LYDELVECRVHKSPAELRVLQYVNDISSDAHLAVMQQVKPGMTEYQLESLFLHHGYYYGGCRHVAYTSICGCGPNAATLHYGHAGAPNDRLIRDGDMLLLDMGAEFRCYASDITCSFPASGTFSPDQKMIFQVVQAMQFAVMDALRPG 371
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A2R5GPE9_9STRA (Xaa-Pro dipeptidase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPE9_9STRA)

HSP 1 Score: 337 bits (864), Expect = 1.490e-98
Identity = 162/311 (52.09%), Postives = 216/311 (69.45%), Query Frame = 2 
Query:  386 FPVDYTMHKTNRAKLISRMRGLDGVPVR--SVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            + VD  M+K NR KL+S+++  D V  +  S+ LF+GG + +R ++D EP+FRQES F YLFGV+EPD    I+LE+ + TL+ P+LP  YA  MG I     F+  Y VD V F  E  S I ++DP+ +Y  +G N D   ++  A  +G++    D +  LYD +VECRVIKS  EI +M+HI  +SS+AH  +M + +PGMRE+QLES+F HW Y+ GGCRH +YTSIC CG N ++LHYGHAGAPND  I  +DM LLDMG EY CYTSDITC+FP +GKFSDDQR ++EAV+D  +TVM +MKPG
Sbjct:   30 YEVDLDMYKENREKLVSKLKARDDVICKDNSIALFQGGPAPTRYDSDHEPIFRQESNFSYLFGVKEPDVYGVIELESGRTTLFFPKLPESYAIVMGEIRSAESFKKEYAVDDVRFEPELRSFIEDLDPKVIYTTRGLNKDSGIYAKEAHYEGVENHRVD-NGTLYDVIVECRVIKSAREIALMRHINKISSQAHCWIMTQAQPGMREFQLESLFEHWGYFRGGCRHRSYTSICGCGGNGSILHYGHAGAPNDGIIEPDDMCLLDMGAEYKCYTSDITCTFPVSGKFSDDQRAIYEAVLDAQWTVMRAMKPG 339
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A7S0YSS7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YSS7_9CRYP)

HSP 1 Score: 323 bits (828), Expect = 2.240e-97
Identity = 156/309 (50.49%), Postives = 211/309 (68.28%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPGEE 1318
            V  +MH  NR +L+S M   D    + V L  GG   +RD++D E +FRQES FHYLFGV EPDCL  ID+    ATL+IPRLPA+YA WMG I  P  F+  Y+V+ V +V E  + + E  PE ++L++G NTD +A  TPA+ +G++    D   +L++AV E RVIKS  E+E+M+    +SS+AH  VMR+ + GM EYQ+ES+F H  Y  GG RH AYT+IC CGPNS+VLHYGHAGAPN+  +G + M+L DMG EY+CY+SDITCSFP +G F+  QR ++EAV++    VM +++PG E
Sbjct:   37 VPRSMHAQNRQRLVSLM---DRKSCKGVALLLGGTGKTRDDSDHEEIFRQESNFHYLFGVAEPDCLGAIDVRDGSATLFIPRLPADYAMWMGPIASPEDFKKKYEVEAVRYVDEIPAFVAEFAPETLFLYEGVNTDSRAKGTPATFEGIEAYAADRE-VLHEAVYEARVIKSELELEVMRFANKVSSDAHIAVMRQVRAGMMEYQMESIFLHHCYSVGGMRHQAYTAICGCGPNSSVLHYGHAGAPNNRKLGRDQMVLNDMGNEYYCYSSDITCSFPVSGVFTPQQRSIYEAVLETTVEVMSALRPGVE 341
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A7J7SCY2_MYOMY (Peptidase D n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J7SCY2_MYOMY)

HSP 1 Score: 315 bits (807), Expect = 3.900e-96
Identity = 154/307 (50.16%), Postives = 204/307 (66.45%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            V   +   NR +L  R+R    V   SV+L +GG    R  TD   LFRQES FH+ FGV EP C   ID++T K+TL++PRLPA +ATWMG I P  HFQ  Y VD V +  E AS +    P  +   +G NTD  +    AS +G+   + + ++IL+  +VECRV K+  E+E++++   +SSEAH EVM+  K GM+EY+LES+F H+ Y  GG RH++YT IC  G NSA+LHYGHAGAPND TI + DM L DMGGEY+C++SDITCSFPANGKF++DQ+ ++EAV+     VM SMKPG
Sbjct:   18 VPLALFALNRQRLCERLRKNPAVQAGSVVLLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDIDTGKSTLFVPRLPASHATWMGKIHPKEHFQEKYAVDNVQYTDEIASVLTSQSPSVLLTLRGVNTDSGSVCREASFEGISKFNVN-NTILHPEIVECRVFKTDMELEVLRYTNRISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAILHYGHAGAPNDRTIRDGDMCLFDMGGEYYCFSSDITCSFPANGKFTEDQKAIYEAVLRSCRAVMSSMKPG 323
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A1S3K4R5_LINUN (xaa-Pro dipeptidase-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K4R5_LINUN)

HSP 1 Score: 313 bits (802), Expect = 2.630e-95
Identity = 150/307 (48.86%), Postives = 207/307 (67.43%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            V   +HK NR +L  R+R    VP  SV++ +GG SA++  +D E LFRQES F ++FGV EPD    ID++T    L+IP+LP  YATWMG I PP HF+  Y VD+V FV + A+ +  ++P K+ + +G NTD       A+  G+     D + +L+  ++ECRVIK+  E+E+++++  +SSEAH EVM+  +PGM EYQ+ES F+H+ Y NGG R  +YT IC  G NS++LHYGHAGAPN   I + DM L DMG EYHCYTSDITCSFPANGKF++DQ+ ++ AV   +  VM ++KPG
Sbjct:   20 VPMELHKENRKRLCERLRANKNVPKNSVVVMQGGESATQYCSDTELLFRQESYFQWMFGVAEPDSYGAIDVDTGVGILFIPKLPESYATWMGKIHPPEHFKDKYGVDKVKFVEDIATVLKNMNPSKLLILRGLNTDSGKHCREAAFDGIGDFTVD-NKLLHPEIMECRVIKTDMELEVLRYVNRISSEAHKEVMKSIRPGMYEYQMESAFQHYCYVNGGMRIMSYTCICGSGFNSSILHYGHAGAPNSKKIQDGDMCLFDMGAEYHCYTSDITCSFPANGKFTEDQKKIYNAVFKASRAVMQAVKPG 325
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A7S1H4D2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H4D2_HEMAN)

HSP 1 Score: 313 bits (803), Expect = 5.750e-94
Identity = 153/309 (49.51%), Postives = 206/309 (66.67%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPGEE 1318
            V  +MH  NR +L+S M        + V L  GG S +RD++D E +FRQES FHYLFGV EPDCL  +D+    ATL+IPRLPA+YA WMG I     F   Y+V+ V +V E  + + E  P+ ++L++G NTD +A  TPA+ +G+D    D  + L++AV E RVIKS +E+E+M+     SS AH  VMR+ + GM EY++ES F H  Y  GG RH AYT+IC CGPN++VLHYGHAGAPN+  +G + M+L DMG EY+CY SDITCSFP +G F+  QR ++EAV+D    VM +++PG E
Sbjct:   16 VPRSMHAQNRQRLVSLMNKQS---CKGVALLLGGTSKTRDDSDHEEIFRQESNFHYLFGVAEPDCLGAVDVRNGAATLFIPRLPADYAMWMGPIASLEDFAKKYEVEAVRYVDEIPAFMSEFAPDTLFLYEGVNTDSRAKGTPATFEGMDKYAADRET-LHEAVYEARVIKSEQELEVMRFANKTSSAAHVAVMRQVRAGMMEYEMESTFLHHCYSKGGMRHQAYTAICGCGPNASVLHYGHAGAPNNRKLGGSQMVLNDMGNEYYCYASDITCSFPVSGTFTPQQRGIYEAVLDATVQVMSALRPGVE 320
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A2B4SBM9_STYPI (Xaa-Pro dipeptidase n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SBM9_STYPI)

HSP 1 Score: 311 bits (797), Expect = 3.950e-93
Identity = 146/307 (47.56%), Postives = 205/307 (66.78%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            +  ++H TNR +L   ++ L GVP  +++L +GG  + R  TD + +FRQES FH+ FGV E DC   ++++T +A L+ PRLP EYA WMG I    HF+  Y+VD V +  E A  + +  P  +   +G N+D   +   A+  G+     D + IL+  + ECRV K+P+E+E+M+++  +SSEAH EVM+  +PGM E+++ES+F+H+ Y  GGCRH +YT I A G N A LHYGHAGAPND  I + DM L DMGGEY+CYTSDITCSFPANGKF+DDQR ++EAV   +  VM ++KPG
Sbjct:   19 IPVSLHATNRKRLCEHLKKLKGVPAGTMVLLQGGEQSQRYCTDTDVVFRQESYFHWTFGVLEADCFGVVEVDTARAILFFPRLPPEYAIWMGKIHSQEHFKEKYEVDEVYYTDEIAEVLQKKSPSVLLTLRGLNSDSGHYCREAAFDGISKFKVD-NKILHPEITECRVFKTPQELEVMRYVNRVSSEAHKEVMKHVRPGMTEFEMESLFQHFCYSLGGCRHMSYTCIGASGHNCATLHYGHAGAPNDKKIHDGDMCLFDMGGEYYCYTSDITCSFPANGKFTDDQRNIYEAVYKASRAVMAAVKPG 324
[Close]
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Match: A0A0G2KZA4_DANRE (Peptidase D n=41 Tax=Cyprinoidei TaxID=30727 RepID=A0A0G2KZA4_DANRE)

HSP 1 Score: 311 bits (796), Expect = 4.910e-93
Identity = 145/307 (47.23%), Postives = 208/307 (67.75%), Query Frame = 2 
Query:  392 VDYTMHKTNRAKLISRMRGLDGVPVRSVLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKATLYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKVYLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIEMMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTSICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFPANGKFSDDQRMVFEAVMDMAFTVMDSMKPG 1312
            V   +   NR +L   ++ L  +   SV++ +GG    R  TD +  FRQES FH+ FGV E DC   ID++++K+ L++P+LP  YATWMG I PP HF+  Y VD V F  + A  + ++ P  +   +G NTD  +    AS +G+   + + +S+L+  +VECR++K+  E+E++++   +SSEAH EVMRR KPG++EY++ES+F+H+ Y  GG RH +YT IC  G NS++LHYGHAGAPND TI + DM L DMGGEY+CY+SDITCSFPANGKF+ DQR ++EAV+  +  VM ++KPG
Sbjct:   19 VSAALFALNRERLCVGLKALPDLQAGSVVVLQGGEQKQRYCTDTDETFRQESFFHWSFGVTEADCYGAIDVDSKKSLLFVPKLPESYATWMGEIFPPGHFKEKYAVDEVHFTTDIADVLAKMKPSVLLTLRGLNTDSGSTCREASFEGISRFEVN-NSLLHPVIVECRLLKTDMELEVLRYTNRISSEAHKEVMRRVKPGLKEYEMESLFQHYCYSRGGMRHTSYTCICGSGNNSSILHYGHAGAPNDKTIQDGDMCLFDMGGEYYCYSSDITCSFPANGKFTADQRAIYEAVLKSSRAVMAAIKPG 324
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig610.13800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDB9_9PHAE4.640e-18475.86AMP_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S1CA66_9STRA6.080e-10751.78Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A4D9D6F9_9STRA2.050e-10451.50AMP_N domain-containing protein n=2 Tax=Monodopsid... [more]
A0A2R5GPE9_9STRA1.490e-9852.09Xaa-Pro dipeptidase n=1 Tax=Hondaea fermentalgiana... [more]
A0A7S0YSS7_9CRYP2.240e-9750.49Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7J7SCY2_MYOMY3.900e-9650.16Peptidase D n=1 Tax=Myotis myotis TaxID=51298 RepI... [more]
A0A1S3K4R5_LINUN2.630e-9548.86xaa-Pro dipeptidase-like n=1 Tax=Lingula unguis Ta... [more]
A0A7S1H4D2_HEMAN5.750e-9449.51Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A2B4SBM9_STYPI3.950e-9347.56Xaa-Pro dipeptidase n=2 Tax=Pocilloporidae TaxID=4... [more]
A0A0G2KZA4_DANRE4.910e-9347.23Peptidase D n=41 Tax=Cyprinoidei TaxID=30727 RepID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig610contigH-paniculata_contig610:586..8740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score316.6
Seed ortholog evalue1.7e-83
Seed eggNOG ortholog225400.XP_006762322.1
Preferred namePEPD
KEGG koko:K14213
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0019752,GO:0031974,GO:0031981,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.Aminopeptidase P, N-terminal domain
EggNOG OGs38EA1@33154,3BD70@33208,3CYK7@33213,3J5Q0@40674,4812V@7711,48WU4@7742,4M4A9@9397,COG0006@1,KOG2737@2759
EC3.4.13.9
COG Functional cat.E
Best tax levelChiroptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons6
Model size2568
Cds size1212
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig610.13800.1prot_H-paniculata_contig610.13800.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig610 1770..8568 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930684.9259388-UTR-H-paniculata_contig610:585..17691622930684.9259388-UTR-H-paniculata_contig610:585..1769Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig610 586..1769 -
1691481405.5468462-UTR-H-paniculata_contig610:585..17691691481405.5468462-UTR-H-paniculata_contig610:585..1769Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig610 586..1769 -
1622930685.0495322-UTR-H-paniculata_contig610:8568..87401622930685.0495322-UTR-H-paniculata_contig610:8568..8740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig610 8569..8740 -
1691481405.6207309-UTR-H-paniculata_contig610:8568..87401691481405.6207309-UTR-H-paniculata_contig610:8568..8740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig610 8569..8740 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930684.9452004-CDS-H-paniculata_contig610:1769..20071622930684.9452004-CDS-H-paniculata_contig610:1769..2007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 1770..2007 -
1691481405.557525-CDS-H-paniculata_contig610:1769..20071691481405.557525-CDS-H-paniculata_contig610:1769..2007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 1770..2007 -
1622930684.9662714-CDS-H-paniculata_contig610:2523..27021622930684.9662714-CDS-H-paniculata_contig610:2523..2702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 2524..2702 -
1691481405.5653877-CDS-H-paniculata_contig610:2523..27021691481405.5653877-CDS-H-paniculata_contig610:2523..2702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 2524..2702 -
1622930684.9880898-CDS-H-paniculata_contig610:2899..30971622930684.9880898-CDS-H-paniculata_contig610:2899..3097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 2900..3097 -
1691481405.573244-CDS-H-paniculata_contig610:2899..30971691481405.573244-CDS-H-paniculata_contig610:2899..3097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 2900..3097 -
1622930685.0047514-CDS-H-paniculata_contig610:5825..59001622930685.0047514-CDS-H-paniculata_contig610:5825..5900Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 5826..5900 -
1691481405.5832691-CDS-H-paniculata_contig610:5825..59001691481405.5832691-CDS-H-paniculata_contig610:5825..5900Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 5826..5900 -
1622930685.0189269-CDS-H-paniculata_contig610:6778..70521622930685.0189269-CDS-H-paniculata_contig610:6778..7052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 6779..7052 -
1691481405.5923157-CDS-H-paniculata_contig610:6778..70521691481405.5923157-CDS-H-paniculata_contig610:6778..7052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 6779..7052 -
1622930685.0334377-CDS-H-paniculata_contig610:8320..85681622930685.0334377-CDS-H-paniculata_contig610:8320..8568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 8321..8568 -
1691481405.6094935-CDS-H-paniculata_contig610:8320..85681691481405.6094935-CDS-H-paniculata_contig610:8320..8568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig610 8321..8568 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig610.13800.1

>prot_H-paniculata_contig610.13800.1 ID=prot_H-paniculata_contig610.13800.1|Name=mRNA_H-paniculata_contig610.13800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=404bp
MVSSGDIPSTAELAATSSLPVSPISLLPAVREGEDNGSGVKRSRQPRSPI
QGAPSSTPTVAPPDVHSTVGEFPVDYTMHKTNRAKLISRMRGLDGVPVRS
VLLFRGGISASRDETDCEPLFRQESTFHYLFGVREPDCLATIDLETEKAT
LYIPRLPAEYATWMGHILPPTHFQGVYKVDRVLFVGEFASSIMEIDPEKV
YLHKGYNTDGKAWSTPASTKGLDGLDCDASSILYDAVVECRVIKSPEEIE
MMQHIANLSSEAHFEVMRRTKPGMREYQLESMFRHWVYYNGGCRHAAYTS
ICACGPNSAVLHYGHAGAPNDLTIGENDMLLLDMGGEYHCYTSDITCSFP
ANGKFSDDQRMVFEAVMDMAFTVMDSMKPGEEENKNIVVFVRTPPSEVDV
SLI*
back to top

mRNA from alignment at H-paniculata_contig610:586..8740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig610.13800.1 ID=mRNA_H-paniculata_contig610.13800.1|Name=mRNA_H-paniculata_contig610.13800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8155bp|location=Sequence derived from alignment at H-paniculata_contig610:586..8740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTTTTTCTCTGCCACTCTAGACTACTTTTCTGCACTGCTTGGGCGCTTG
TTTCCGCCGTATAAACAACCACTGCCAGTCCCTACGGATGCTTCCGAAGA
CGCCATATTGTTCAAACGACAGCACGAACAGCAACAACAGCTACAAGGTG
ACAACAGATAGCAGTTGGAGCGATGGTATCATCCGGCGATATACCGTCTA
CTGCGGAATTAGCCGCTACCTCGAGTCTTCCTGTGAGCCCCATCTCTTTG
CTCCCAGCTGTTCGTGAGGGTGAAGACAATGGCAGTGGGGTTAAGCGCTC
GAGGCAGCCGCGTTCCCCGATCCAGGGTGCTCCGTCTAGTACGCCAACGG
TGGCACCGCCCGACGTGCACTCAACCGTCGGAGAGTTTCCTGTGGACTAT
ACCATGCACAAAACGAACAGGTGGTAATTCCAATTTATGGTCAAAGACAT
TTGTGTTCCAGTGGGTTGAATATGTATTGGCATTTGACCACGCGTGTAGT
GGATGAGGCATTGCTTGCTGGGTTGTGCCGTCTGTACCCTCTTGAACTTC
TCCTTCTCCTGTTGCAGTATTATCTACTGGATGACTTGTATTTTGACGGC
GCCGTGGTCAAAATGACGATGAATTTCGAATTCCATCATGTTGTGCCCAA
GTGACATTCCTAGCAGCGGCTTTTTTTGGGTGCAAATTACAATTTCAGAC
CTCAGAGAGCGCCGTACGCAGGCAGACAACGATTTCGCAGTGCAGATTGA
TTGTTTTTAGTGCTCCTATGTTGGCCGCAAGGTAGCCTACGGCTTACTCA
CTGGTGGGTGAGGTGTGCTTGGCGCGTTGCGTCCGAAAAACGGTGTCTAC
AATGGTAAATTTGGCTGGAATTTGCAGAATTTATGGTTGAATCAAGTACA
GTTAATCAGTAGATTAGCTCCAGAAGGCGATGTCTTGGCCTTACACAGTG
AGCAGAAAAACTTAGATGCTCCACCTCCTTCGCTTTTGATGAGTTGGATA
CAGTGAGCATAAGAGTGTTTCATAGCGGCCACGTGCCCAAGCTGGTGTAT
GCGGAATGCCTTGATTACGTACTGCCCAACCATCCTCTCACGATCATTTT
TCTAGCTGGGCGACTACGTGTTTTTTTTTGTCACCCGTAGGTCAACAAAA
TGTAATTTCAGCAAAAGTGAAATCTGATGGCTAGGTGCCAATCAGAATGG
CGTACATTTTATATATGAAATTCACACTTCGCATATGGATTCTCAATTCT
CTCCCCTGGTTGGGGGCCCAGTACAACAACATGTTGCTCTTGCCTTCCGT
CGGACAAAGCCTCTCATGTGCAAGTATTCAAGGGCTAGCACCGGAGCTAA
CTCGCGTGTGCTCTGTCTCGCTGTGCATGCTGTTCCGAGACTTTTTTTTT
TTTTTTGCTTTTGCGACTGTTGACTCTTTCGTGCTGGCTCTTTCCTGCTG
ACTCCTTCGCGCTGACTATTTCGTATGGACTATTTCGTGCCGACTCAACT
GTATCGTAACGTACGGTTGGATCCATGAATGCAGTTGTCCTTTTTGACTA
TGGTTCAAATGTTTCACACGCGGCGCGTTTTCCTTTGTCTTTCAAGATTT
CTCGTTGTATTGCTTGTACATTTTGGACACTGGATCACAGTTTATGCTTA
CGTATAGTTGTACATTTATATATATATAATTTATACAGGGCCAAGCTCAT
CAGCAGAATGCGCGGCCTTGACGGAGTTCCTGTCCGCAGTGTGCTGCTAT
TTCGTGGAGGAATTTCGGCCAGCCGCGACGAGACGGATTGTGAACCGTTA
TTCCGTCAGGAGTCTACGTTCCATTACCTTTTCGGGGTTCGGGAGCCGGA
TTGCCTCGCCACCATCGATTTGGAAACGGAAAAAGCCACTTTGTACATCC
CGAGGTTACCCGCCGAGTACGCGACGTGGATGGGGCACATTTTGCCGCCC
ACGCATTTCCAGGTACAGTTCAATCAGCTCAAACGATCTCCGTAGCGTAA
CGGCCGGACAACGTATCACCGTTTATATGGAACAGGTCGACGTTTTGATG
ACTAAATGTAAGGTACCACCGAGTAAGGCATGCCACGGCAATGAAGGTAA
ATATGAAACAATTCGGTAGCCTTGCGCAGGTACCCCATCGAATAAAGTGA
AGCTGATTCGGGTATGTCCTGCAGGTTCGCTTGCAAGTTTTAATTTATGG
AACAAGCAAGTTCTGAAGTACAGATTTGACCCTGCAACATTGTGTAAAGT
TTGTTAAGGAGTTTTTTCTAGGTCTGAGTGAAGGCGACATAGCCTCCGCG
TGACATGTGTTCTGATATTTCAAATCGATGGATGTCTAACCCTTTCGGGG
TTCGAGATATGGGCAAATCATCATCTACCGTTGTTCTTTCAGCCGAGGTA
AAACGCTGACGAATCAACCAATTCACTTCTCAGACAGGACGACATATGAT
TCCCTTGTCTGTACAATCGCCCCCTGTTAGTTTTTTTTCCAACGTAAAAT
GCCTTTAGCATGAAAAAAAAAAAGTTCGAAAAGCCGATCCCAGAAAAGAT
ATTTTTGAGGTGTAAGCCCCCCTAAGGTTAGGGAAGGAAACGTTCAGCCT
CAGTGGGTCCCATTCTTTCGAAGGGATATTGCGGCATACTCATCCCCCCC
ATTAGATACCGGTGCTATCGTATGGACAGAATAATGCGCCCTCAGTGAAT
ATCTGGCATATCCATCTCGGAGAAAAGTAGATCTATGCCCTTGTGTTGTG
TGAAGATTGGCGATGAGCATAACCCCACCCCGCCCTCCCCCATCCCTCGT
TTACCCCTCCTAAAAAACCACGGCTTTGGAACAAGAGCAGGGTGTGTACA
AGGTGGACCGGGTTCTCTTTGTCGGCGAATTCGCGTCGAGCATCATGGAA
ATAGACCCTGAGAAGGTGTGAGCACCTTACCAATCACGAGAAAAATAATC
GAATTAGTCAGATCTGAACTTCCCTTGTCCGTCCACCAAATTTGCGAATT
TCTCTGTCAATTCGAACCGAACTCCCGTGATATGAGGTGCATAAGAATCC
TTCCTCTACACTTATCTTGTGAAGTACCCCTAGAAAAGATGCAATTGAAC
GTATCTACTTGACGGCCCGGACAAGACAACCGCAGCACCGTGGCGCAATT
CGAACCCCTACGTTGCTGTCGAGTGAAGGACCCAGAATGATGTCATTTTG
ACCTAATCCAGTCGTTTCCTTTTGATTTAACAAGAATTCCACCCTCCGGA
CAAGTACGAGTGGAGTATTCGTAACCATCTCGAACTATCATCATATGTCT
TGGTAAACGTGTATTTTTTCGATTACAAGCCTATGAATGGTCACTCTACA
GATCGTCGCCAGGTGGTCGTATACCCGGTGAACAGTCATATGTGCAACTC
ATCTGCCCAAGCTTTTGGATGCTCTATGGTATATCGAGTACACTGCATAT
AATTCGCGTCACGTGGACATCTTCCCAAATTCAATCAGATATGGTATTTA
TGCCAGATTTCTCGTATTAGTCCTGTCTTGTTTTCGTATTTGTCGGGCCG
GTGAAGTATTGTCATTTCAATTTTTTGAAACGTGGACCCTGACGCACACA
CGGGCGTGCATCTACACTGCAGAGCAGTGGTTACACAACCGTACACCGCA
GTTAGCTGCGCATACCAGATGAAGCTGTAGGTGCACTGTACCAATCAGCG
ATATATTTTCCACGTTGGGGTGTCAGGGGTTGCATCCTTGGTCTTGTCTT
GTTGCATCAGTTGGTACGCAGATATTCGTACACAGTCCTTATACGATGAG
TTTCGCGACATGGGAAACGAGAGCATCTTAAAGGGTTCCTGGATGGTTTC
TAATAGCATGGTGCTTCCACGGACCTACGCCCGAACGGGTAGGGTAGCTC
GTGTACTGAGCATGACTGGAAGTCTAGTCAGAGGTCTTTTAGTAGGTGAA
ACTCCTACACTGCCTACTTGGTTCGGCCGAACCGGGGTGGCGCCTACCCC
GCAGAGGAATAAACAACTCTGTTGTAGACATGTTTGGGCGAATGCCTGAA
TGTGGAAGCAGCAGAAAAGGTTTTTGCCTCAGCCTTCCGGGGGTTAAAAA
AAAAATAGCATGGTGCTTTTCTCAATTTCATATCTTCCCCCCAGATTCCG
AGAAAATACAAAAAAAGTTATTCGGTAAATGATGTTATTTACCCCCAAAT
TGTTCCGATATGTGTTTTTTTTTTTTGGCTTTTATCTCGTGCTCTGTTCG
AGTCAAGAAAAACGGAGAAAACGCGTTTGTAGGTATGGACAATACAAAAA
ACTGCAGGCTCGTTCATTTTTATTTCATGCCTTTTGAGTAAGGTATGTTG
CCAATTCCTGAACTTGGACTTGTTTTCAGTTTGGGAAAGTTCAAATATAT
GTCTGAAATTAGAGACGCAAAAAAGAGGAGCGAGCCCAAGGTCAGTTATT
TAGTTTATAGTTACAATCGCGTATTTCCCGTTTTTCAAAACGCTAAAACA
CCACGGGATTACAACCAGGTGAAGGATTCCTGTTTTTTACCTGAGACAGG
TGCACACTTAATTGAGGGGGATTTTATTTTGTCCCGGAAATTGCCGGATC
GCTTGGCACCAGAGGCGAAGACAAATTAAAGATCAACGAAGAGTTCATTT
TATCATTCATGTGTACACGTGATTCAATTTTCAGATGAAACCTCGTCCCT
GAACGTGTGTTCACGATATCTTGGAGTATGACACAAGGTCCCCAATTTTA
GGCAGAAAATTGATATATTTGGATTTTTTTGCGAAAGCTCGTACAATTCA
CGAGATTTGGTCTGAAATTTGGCTCACATGTGCTCATAAAGGTTGTGAGC
AAAGTGACGGGAACTCATTTTGTAATTTTAGCTAAGGGAGCCGTGAATGC
GGCCTTGATTGGGAACCTCAGAAGTGAAATAAATAATGTACACCACTGTA
TCATTTAATTTATACGTGGGTTTAAAATTTCATATCTTGATTCGTAAAAT
CCACAGAAATATCCAGGTAGTCGATTCCTCCCCCTCTTTGTGGTATCAGG
TTGTAGCTGTCTCAAGTCAGCTTGCCGTGATTTACGCGATATAACACACC
CCCAGGAATTACTTTGGAACGGTATCGCGAGGGGCGGTATTCGTGGAGGA
GGGTGGTATACCACGTACCATCAATATCAATCACAGTGCATGCGAGATGT
GCGCTATAGGTACGTGGTTTTGTCCTGTAAACCGCGGTCCTTCTACATAC
TCGAAGATTTCGTGAGGATAGGTCACGGGGAATATCATACCCGGTGGTGA
CATGGTCAAAACTCGATTTATGGTAAAAAAAATTAACTGTTTCGTTGGAA
TCATCTCGTTGAGATTTATGTCGATTCACGCTCTGTTTCGATCATGTAGG
GAGAATCTGCGTAGATCTGTACAGTTTATTTGGTGTGCCCAAGAACCAAA
CTCAAAACAGTATTACGGGATTGAGAGATCTAATACTGGAACCAATCAAT
CTAGAACCAAATTCAGCACCAAGTGGAAAATCAGTTCATCTGGAATCGAT
AGAAAAGACAAGTCTTGTCCCCGAGATATTGGAGTACTTCGGGTGTGATT
CCGCCGCTGCTTGACTTTAAACGATATACGTATTTGGCCGCAGGTGTATC
TTCACAAAGGGTACAACACGGATGGCAAGGCGTGGTCGACTCCTGCGAGT
ACGAAGGGGCTGGATGGTCTAGATTGCGATGCATCTTCGATTCTCTACGA
TGCCGTGGTAGAGTGCCGGGTTATCAAGTCGCCGGAGGAGATTGAGATGA
TGCAGCATATCGCGAACCTCAGCAGCGAAGCCCACTTCGAGGTAATATGC
TACAATGCCACCATTGACACTTCCCCAATTTTCTCATGCTTCGGTAATTA
CAAATCTGGTGGCAAAGAGTATTTACGACTGAATTAACGCCACCATACTA
CATCCTCGTAACTAGGTCGTTTCCCCCAACGTGTCATACTCTATTCCGGA
ATATTGCTCACCTGGTTACGTCCATCCTTGACTGTCAGGTGATGAGGCGC
ACAAAGCCGGGGATGCGAGAGTATCAGCTCGAGAGCATGTTCCGGCATTG
GGTGTATTACAACGGCGGGTGCCGCCACGCTGCCTACACCAGCATCTGCG
CCTGTGGCCCCAACAGCGCCGTTCTTCACTATGGCCACGCCGGGGCGCCA
AACGACCTCACCATCGGGTGAAAATTTTGTTGTTTTTTCGGTTTTGTAGG
TTTTTTTAGCTTCCATGTGCCAGGATGCTGGTATCCGGTATCCTGTTGTT
GGAGGCCTGGTCGTACGTGACCCAGGGCCATGCTCACACCATAGGTTCGA
GGGGGGTACAACATCATACCGAAGTATATCCCTTTCCTCAATTACCACCA
CCACCACCCCGCTCCCCATCACGATGTCCCAAATGTTATTCCGGGGGGTG
TTACCTTACCCGAACGAGTTGTGAATGAAGTTGGAATTTGGATGTTTCAA
AAACCCTACCCTGTTGATGAACGCTTAGATGATCTGAATTTGGTACATGC
TGCTGTGCCACCTGGTGGTGCTGGTAATTGCTGCTCTTGCTGCAATTTTT
TTTGTATGTTCCTTTTGAATAAACTTGAGCACACGTTGGGGTTTTTACGC
ACTAAATATTTACGCTTGTCTTGGATGAACGCTCAGTTCTGTGTTGTTGA
CACTGTTGCCCTCTGATACTCCTGCCTCTGCAGAGAAAATGACATGCTCC
TCTTGGACATGGGGGGCGAGTACCACTGCTATACCAGCGACATCACGTGC
TCCTTTCCTGCCAACGGCAAGTTCTCGGACGACCAGAGGATGGTGTTTGA
GGCGGTGATGGACATGGCCTTCACGGTGATGGACAGTATGAAGCCTGGTG
AGGAAGAAAACAAGAACATCGTTGTTTTTGTTCGTACCCCCCCATCTGAG
GTTGATGTCTCTCTGATATGACGTTGATTACTTAATCTCCTTGCTACCCC
GATTTACACGCCATAGCTGAGAGCGAAAGCGCTTTCCCTCGACCGTTCTA
GCATGGTTTCCTTTGCACATTATAGGGTTCAAAGTGCCTCTCGCTCGTAA
CCTTGTTGGCATCTTCGCGCGTACCGTTGCGTGTCATGAACTTTCATGCA
CAGACAAAATCGTGCGAGAAAGGTCTATCGAAAGCGCTTTGGACCCTAAT
TATTTCATATTTTGTGCAAATCGACGGGAAAATTGCGGTCACTTGGCACT
GGAGAGAAGCCAACCCATGGAGATTAGTTCAGATTACTCAAATATAGACC
TTCGCTTGGCGTTTCAAGCAATAGGGGTAATCTTTGTATATCTGCAGATG
CTTACTGTGGGATCGAGACCCAGCGTGTACACCAATTCTACCACCTTGAC
TGCTGGAGTGGAAGGACTCGAACCTAGGATCCCCGTACCAAAAACGGGTG
CCTTACCAACTTGGTCAGGCTCTATAGCTCAAAACAAGTAAAAATCGGTT
CGATAGAAACTGAATTTAGGTTCGGATCATGCTTGCATTTTTTTTTTGAT
CCGAAGTGTTTTCGAGGATGAGCGAGGTTGAATTTCCCATTATCACGGAC
CTACGCCCGAAAGGGTGGGGTAGCTCGTGAAGTAAGCATGATTGGAAGTC
TAGTCAGAGGTCTTTTAGTGGGCGCAACCCCCACATTGCCTACTTGGTTC
GGCCGAACCGGGGTGGCGCCTACCCCGCAGAGGAATAAATAACTGTTCTG
TTAAAGGAAATATAGAAATAGGTAGGTAGAATACTTTAGTATGGAAGCAT
TGGTACAGGTTTTTGCCTTAGCCTTCCGGAGGTTTAAAAAGAAAAAAAAA
ATCTTCCAATTTATGTCCTCTTTATTCGTGCCTGTATTTTGTATATGTTT
CACCCTCCGGGCACATACGAATAATTGGCGTATTCGTTACGAAAATTAAA
ATTATTCGCCTGAGTTTCAAAATGAGTTCGTACATTGTATGTGCCCCGCA
CCCTCCATGACTGCTTGTGTTACTCAAAATCAAATGGAACGGGGTAGATA
CTTTATTCGATGTGTCCGCTTATTCTGAAACTCAGGTGGATACATTTTAA
TTGTCGTGGAGAATATGCCGATTATTCGTATTTGTCCGGGGTAATAGGTT
TGTCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig610:586..8740-

>mRNA_H-paniculata_contig610.13800.1 ID=mRNA_H-paniculata_contig610.13800.1|Name=mRNA_H-paniculata_contig610.13800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2424bp|location=Sequence derived from alignment at H-paniculata_contig610:586..8740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTATCATCCGGCGATATACCGTCTACTGCGGAATTAGCCGCTACCTC
GAGTCTTCCTGTGAGCCCCATCTCTTTGCTCCCAGCTGTTCGTGAGGGTG
AAGACAATGGCAGTGGGGTTAAGCGCTCGAGGCAGCCGCGTTCCCCGATC
CAGGGTGCTCCGTCTAGTACGCCAACGGTGGCACCGCCCGACGTGCACTC
AACCGTCGGAGAGTTTCCTGTGGACTATACCATGCACAAAACGAACAGAT
GGTATCATCCGGCGATATACCGTCTACTGCGGAATTAGCCGCTACCTCGA
GTCTTCCTGTGAGCCCCATCTCTTTGCTCCCAGCTGTTCGTGAGGGTGAA
GACAATGGCAGTGGGGTTAAGCGCTCGAGGCAGCCGCGTTCCCCGATCCA
GGGTGCTCCGTCTAGTACGCCAACGGTGGCACCGCCCGACGTGCACTCAA
CCGTCGGAGAGTTTCCTGTGGACTATACCATGCACAAAACGAACAGGGCC
AAGCTCATCAGCAGAATGCGCGGCCTTGACGGAGTTCCTGTCCGCAGTGT
GCTGCTATTTCGTGGAGGAATTTCGGCCAGCCGCGACGAGACGGATTGTG
AACCGTTATTCCGTCAGGAGTCTACGTTCCATTACCTTTTCGGGGTTCGG
GAGCCGGATTGCCTCGCCACCATCGATTTGGAAACGGAAAAAGCCACTTT
GTACATCCCGAGGTTACCCGCCGAGTACGCGACGTGGATGGGGCACATTT
TGCCGCCCACGCATTTCCAGGGCCAAGCTCATCAGCAGAATGCGCGGCCT
TGACGGAGTTCCTGTCCGCAGTGTGCTGCTATTTCGTGGAGGAATTTCGG
CCAGCCGCGACGAGACGGATTGTGAACCGTTATTCCGTCAGGAGTCTACG
TTCCATTACCTTTTCGGGGTTCGGGAGCCGGATTGCCTCGCCACCATCGA
TTTGGAAACGGAAAAAGCCACTTTGTACATCCCGAGGTTACCCGCCGAGT
ACGCGACGTGGATGGGGCACATTTTGCCGCCCACGCATTTCCAGGGTGTG
TACAAGGTGGACCGGGTTCTCTTTGTCGGCGAATTCGCGTCGAGCATCAT
GGAAATAGACCCTGAGAAGGGTGTGTACAAGGTGGACCGGGTTCTCTTTG
TCGGCGAATTCGCGTCGAGCATCATGGAAATAGACCCTGAGAAGGTGTAT
CTTCACAAAGGGTACAACACGGATGGCAAGGCGTGGTCGACTCCTGCGAG
TACGAAGGGGCTGGATGGTCTAGATTGCGATGCATCTTCGATTCTCTACG
ATGCCGTGGTAGAGTGCCGGGTTATCAAGTCGCCGGAGGAGATTGAGATG
ATGCAGCATATCGCGAACCTCAGCAGCGAAGCCCACTTCGAGGTGTATCT
TCACAAAGGGTACAACACGGATGGCAAGGCGTGGTCGACTCCTGCGAGTA
CGAAGGGGCTGGATGGTCTAGATTGCGATGCATCTTCGATTCTCTACGAT
GCCGTGGTAGAGTGCCGGGTTATCAAGTCGCCGGAGGAGATTGAGATGAT
GCAGCATATCGCGAACCTCAGCAGCGAAGCCCACTTCGAGGTGATGAGGC
GCACAAAGCCGGGGATGCGAGAGTATCAGCTCGAGAGCATGTTCCGGCAT
TGGGTGTATTACAACGGCGGGTGCCGCCACGCTGCCTACACCAGCATCTG
CGCCTGTGGCCCCAACAGCGCCGTTCTTCACTATGGCCACGCCGGGGCGC
CAAACGACCTCACCATCGGGTGATGAGGCGCACAAAGCCGGGGATGCGAG
AGTATCAGCTCGAGAGCATGTTCCGGCATTGGGTGTATTACAACGGCGGG
TGCCGCCACGCTGCCTACACCAGCATCTGCGCCTGTGGCCCCAACAGCGC
CGTTCTTCACTATGGCCACGCCGGGGCGCCAAACGACCTCACCATCGGAG
AAAATGACATGCTCCTCTTGGACATGGGGGGCGAGTACCACTGCTATACC
AGCGACATCACGTGCTCCTTTCCTGCCAACGGCAAGTTCTCGGACGACCA
GAGGATGGTGTTTGAGGCGGTGATGGACATGGCCTTCACGGTGATGGACA
GTATGAAGCCTGGTGAGGAAGAAAACAAGAACATCGTTGTTTTTGTTCGT
ACCCCCCCATCTGAGGTTGATGTCTCTCTGATATGAAGAAAATGACATGC
TCCTCTTGGACATGGGGGGCGAGTACCACTGCTATACCAGCGACATCACG
TGCTCCTTTCCTGCCAACGGCAAGTTCTCGGACGACCAGAGGATGGTGTT
TGAGGCGGTGATGGACATGGCCTTCACGGTGATGGACAGTATGAAGCCTG
GTGAGGAAGAAAACAAGAACATCGTTGTTTTTGTTCGTACCCCCCCATCT
GAGGTTGATGTCTCTCTGATATGA
back to top