prot_H-paniculata_contig6093.13792.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6093.13792.1
Unique Name	prot_H-paniculata_contig6093.13792.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	121

Homology

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 9.110e-70
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADEYGTATNIKSRVNKLSVLSAI STQQRLKLY+RVPPNGLVIYCGTIVTDEGKEK+MNLDFEPFK INTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG
Sbjct:   55 MLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 167

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 5.910e-66
Identity = 101/113 (89.38%), Postives = 109/113 (96.46%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADEYGTA+NIKSRVN+LSVL AI STQQRLKLY +VPPNGLVIYCGTI+TDEGKEK++N+DFEPFKPINTSLYLCDNKFHTEALDELLQDD+RFGFIVMDGNG LYGTLQG
Sbjct:   57 MLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQG 169

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: UPI001F9CA746 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F9CA746)

HSP 1 Score: 202 bits (514), Expect = 2.360e-65
Identity = 95/117 (81.20%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQGRCVR 117
            MLADE+GTA+NIKSRVN+LSVL AI S Q RLKLYT+VPPNGLVIYCGTIVT+EGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL  LL DD +FGFIVMDGNG L+GTLQG  ++
Sbjct:    1 MLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGENIK 117

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A161MN65_TRIIF (Eukaryotic peptide chain release factor subunit 1 (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MN65_TRIIF)

HSP 1 Score: 201 bits (512), Expect = 2.190e-64
Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADE+GTA+NIKSRVN+LSVL AI S Q RLKLYT+VPPNGLVIYCGTIVT+EGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL  LL DD +FGFIVMDGNG L+GTLQG
Sbjct:    2 MLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQG 114

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A0N0BI83_9HYME (Eukaryotic peptide chain release factor subunit 1 n=3 Tax=Neoptera TaxID=33340 RepID=A0A0N0BI83_9HYME)

HSP 1 Score: 201 bits (512), Expect = 3.940e-64
Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADE+GTA+NIKSRVN+LSVL AI S Q RLKLYT+VPPNGLVIYCGTIVT+EGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL  LL DD +FGFIVMDGNG L+GTLQG
Sbjct:   51 MLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQG 163

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S3NJC5_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJC5_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.170e-64
Identity = 97/113 (85.84%), Postives = 110/113 (97.35%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLY++VP NGLV+YCGTI+TDEGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD++FGFI+MDGNG LYGTLQG
Sbjct:   53 MLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYSKVPTNGLVVYCGTILTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIIMDGNGALYGTLQG 165

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.850e-64
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            ML+DEYGTA+NIKSRVN+LSVLSAI STQQRLKLY RVPPNGLVIYCGT+VTDEGKEK +  DFEPFKPINTSLYLCDNKFHTEAL+ELL+DDERFGFIVMDGNG LYGTLQG
Sbjct:   47 MLSDEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRVPPNGLVIYCGTVVTDEGKEKSVIYDFEPFKPINTSLYLCDNKFHTEALNELLEDDERFGFIVMDGNGCLYGTLQG 159

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S2F8Y1_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8Y1_9STRA)

HSP 1 Score: 209 bits (531), Expect = 7.020e-64
Identity = 96/113 (84.96%), Postives = 110/113 (97.35%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            ML+DEYGTA+NIKSRVN+LSVL AI STQQRLKLY +VPPNGLVIYCGTI+TDEGKE+++N+DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD++FGFIVMDGNG+LYGTLQG
Sbjct:   26 MLSDEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIVMDGNGSLYGTLQG 138

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: F0YK48_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK48_AURAN)

HSP 1 Score: 209 bits (531), Expect = 8.140e-64
Identity = 96/113 (84.96%), Postives = 110/113 (97.35%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADEYGTA+NIKSRVN+LSVL AI STQQRLKLY+RVP NGLV+YCGTI+TDEGKE+++N+DFEPFKPINTSLYLCDNKFHTEALDELL+DD++FGFI+MDGNG+LYGTLQG
Sbjct:   56 MLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQG 168

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BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A4P9Z556_9FUNG (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z556_9FUNG)

HSP 1 Score: 208 bits (530), Expect = 9.920e-64
Identity = 97/113 (85.84%), Postives = 107/113 (94.69%), Query Frame = 0

Query:    1 MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 113
            MLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLYT+VPPNGLV+YCGTI+TDEGKEKK+N+ FEPF+PINTSLYLCDNKFHTEAL ELL+ D RFGFIVMDGNGTL+GTL G
Sbjct:   53 MLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYTKVPPNGLVVYCGTIITDEGKEKKVNISFEPFRPINTSLYLCDNKFHTEALQELLESDSRFGFIVMDGNGTLFGTLSG 165

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIB3_ECTSI	9.110e-70	96.46	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A836CQL8_9STRA	5.910e-66	89.38	Eukaryotic peptide chain release factor subunit 1 ...	[more]
UPI001F9CA746	2.360e-65	81.20	Uncharacterized protein n=1 Tax=Spodoptera exigua ...	[more]
A0A161MN65_TRIIF	2.190e-64	84.07	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A0N0BI83_9HYME	3.940e-64	84.07	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A7S3NJC5_9STRA	4.170e-64	85.84	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A7S2UVJ2_9STRA	4.850e-64	88.50	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A7S2F8Y1_9STRA	7.020e-64	84.96	Eukaryotic peptide chain release factor subunit 1 ...	[more]
F0YK48_AURAN	8.140e-64	84.96	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A4P9Z556_9FUNG	9.920e-64	85.84	Eukaryotic peptide chain release factor subunit 1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005140	eRF1 domain 1/Pelota-like	SMART	SM01194	eRF1_1_2	coord: 1..91 e-value: 2.3E-13 score: 60.4
IPR005140	eRF1 domain 1/Pelota-like	PFAM	PF03463	eRF1_1	coord: 2..89 e-value: 3.2E-12 score: 46.6
IPR024049	Peptide Chain Release Factor eRF1/aRF1, N-terminal	GENE3D	3.30.960.10		coord: 1..86 e-value: 4.8E-44 score: 151.4
IPR024049	Peptide Chain Release Factor eRF1/aRF1, N-terminal	SUPERFAMILY	55481	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	coord: 1..92
IPR042226	eRF1, domain 2 superfamily	GENE3D	3.30.420.60		coord: 87..119 e-value: 1.1E-8 score: 37.0
IPR004403	Peptide chain release factor eRF1/aRF1	PANTHER	PTHR10113	PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1	coord: 1..114
None	No IPR available	PANTHER	PTHR10113:SF10	EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1	coord: 1..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6093	contig	H-paniculata_contig6093:11733..12776 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6093.13792.1	mRNA_H-paniculata_contig6093.13792.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6093 11712..12776 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6093.13792.1 ID=prot_H-paniculata_contig6093.13792.1|Name=mRNA_H-paniculata_contig6093.13792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTI
VTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIV
MDGNGTLYGTLQGRCVRRTM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005140	eRF1_1_Pelota
IPR024049	Release_factor_eRF1/aRF1_N
IPR042226	eFR1_2_sf
IPR004403	Peptide_chain-rel_eRF1/aRF1