mRNA_H-paniculata_contig6093.13792.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI) HSP 1 Score: 237 bits (605), Expect = 9.500e-75 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QIARVGKMLADEYGTATNIKSRVNKLSVLSAI STQQRLKLY+RVPPNGLVIYCGTIVTDEGKEK+MNLDFEPFK INTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG
Sbjct: 48 QIARVGKMLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 167
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.780e-70 Identity = 107/120 (89.17%), Postives = 116/120 (96.67%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RVGKMLADEYGTA+NIKSRVN+LSVL AI STQQRLKLY +VPPNGLVIYCGTI+TDEGKEK++N+DFEPFKPINTSLYLCDNKFHTEALDELLQDD+RFGFIVMDGNG LYGTLQG
Sbjct: 50 QISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQG 169
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.070e-68 Identity = 105/120 (87.50%), Postives = 114/120 (95.00%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
Q++RVGKML+DEYGTA+NIKSRVN+LSVLSAI STQQRLKLY RVPPNGLVIYCGT+VTDEGKEK + DFEPFKPINTSLYLCDNKFHTEAL+ELL+DDERFGFIVMDGNG LYGTLQG
Sbjct: 40 QVSRVGKMLSDEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRVPPNGLVIYCGTVVTDEGKEKSVIYDFEPFKPINTSLYLCDNKFHTEALNELLEDDERFGFIVMDGNGCLYGTLQG 159
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A068S576_9FUNG (Eukaryotic peptide chain release factor subunit1 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S576_9FUNG) HSP 1 Score: 220 bits (561), Expect = 3.740e-68 Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RVGKMLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLY +VPPNGLV+YCGTIVTDEGKEKK+N+DFEP KPINTSLYLCDNKFHTEAL ELL+DD +FGFIVMDGNGTL+GTL G
Sbjct: 45 QISRVGKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPHKPINTSLYLCDNKFHTEALSELLEDDAKFGFIVMDGNGTLFGTLSG 164
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A8H7VLQ0_9FUNG (eRF1_1 domain-containing protein n=3 Tax=Mucorales TaxID=4827 RepID=A0A8H7VLQ0_9FUNG) HSP 1 Score: 219 bits (559), Expect = 7.450e-68 Identity = 103/120 (85.83%), Postives = 114/120 (95.00%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RVGKMLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLY RVPPNGLV+YCGTIVTDEGKEKK+N+DFEP KPINTSLYLCDNKFHTEAL ELL+DD +FGFI+MDGNG+L+GTL G
Sbjct: 45 QISRVGKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRVPPNGLVVYCGTIVTDEGKEKKVNIDFEPHKPINTSLYLCDNKFHTEALSELLEDDAKFGFIIMDGNGSLFGTLSG 164
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A0N0BI83_9HYME (Eukaryotic peptide chain release factor subunit 1 n=3 Tax=Neoptera TaxID=33340 RepID=A0A0N0BI83_9HYME) HSP 1 Score: 211 bits (537), Expect = 8.190e-68 Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RV KMLADE+GTA+NIKSRVN+LSVL AI S Q RLKLYT+VPPNGLVIYCGTIVT+EGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL LL DD +FGFIVMDGNG L+GTLQG
Sbjct: 44 QISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQG 163
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: F0YK48_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK48_AURAN) HSP 1 Score: 218 bits (556), Expect = 1.950e-67 Identity = 101/120 (84.17%), Postives = 116/120 (96.67%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RV KMLADEYGTA+NIKSRVN+LSVL AI STQQRLKLY+RVP NGLV+YCGTI+TDEGKE+++N+DFEPFKPINTSLYLCDNKFHTEALDELL+DD++FGFI+MDGNG+LYGTLQG
Sbjct: 49 QISRVAKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQG 168
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S2F8Y1_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8Y1_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.360e-67 Identity = 100/120 (83.33%), Postives = 116/120 (96.67%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+R+ KML+DEYGTA+NIKSRVN+LSVL AI STQQRLKLY +VPPNGLVIYCGTI+TDEGKE+++N+DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD++FGFIVMDGNG+LYGTLQG
Sbjct: 19 QISRISKMLSDEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIVMDGNGSLYGTLQG 138
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A139AXZ7_GONPJ (Peptide chain release factor eRF/aRF subunit 1 n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AXZ7_GONPJ) HSP 1 Score: 218 bits (555), Expect = 2.480e-67 Identity = 101/120 (84.17%), Postives = 115/120 (95.83%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+RVGKMLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLY++VPPNGLV+YCGTIVTDEGKEKK+N+DFEPFKPINTSLYLCDNKFHT+AL ELL+ D +FGFI+MDGNG+L+GTL G
Sbjct: 42 QISRVGKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYSKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTQALSELLESDSKFGFIIMDGNGSLFGTLTG 161
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Match: A0A7S3NJC5_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJC5_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.830e-67 Identity = 101/120 (84.17%), Postives = 116/120 (96.67%), Query Frame = 1
Query: 1 QIARVGKMLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIVTDEGKEKKMNLDFEPFKPINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQG 360
QI+R+ KMLADEYGTA+NIKSRVN+LSVLSAI STQQRLKLY++VP NGLV+YCGTI+TDEGKEKK+N+DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD++FGFI+MDGNG LYGTLQG
Sbjct: 46 QISRITKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYSKVPTNGLVVYCGTILTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIIMDGNGALYGTLQG 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6093.13792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6093.13792.1 >prot_H-paniculata_contig6093.13792.1 ID=prot_H-paniculata_contig6093.13792.1|Name=mRNA_H-paniculata_contig6093.13792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MLADEYGTATNIKSRVNKLSVLSAIISTQQRLKLYTRVPPNGLVIYCGTIback to top mRNA from alignment at H-paniculata_contig6093:11712..12776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6093.13792.1 ID=mRNA_H-paniculata_contig6093.13792.1|Name=mRNA_H-paniculata_contig6093.13792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1065bp|location=Sequence derived from alignment at H-paniculata_contig6093:11712..12776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6093:11712..12776+ >mRNA_H-paniculata_contig6093.13792.1 ID=mRNA_H-paniculata_contig6093.13792.1|Name=mRNA_H-paniculata_contig6093.13792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig6093:11712..12776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |