prot_H-paniculata_contig609.13790.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig609.13790.1
Unique Name	prot_H-paniculata_contig609.13790.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	581

Homology

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BLAST of mRNA_H-paniculata_contig609.13790.1 vs. uniprot
Match: D7G6G6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G6_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 8.050e-168
Identity = 307/629 (48.81%), Postives = 375/629 (59.62%), Query Frame = 0

Query:   24 LLHILEYFHEPELVGSGLVIYVIHAVSQTTNIPHLFLNGLKVIIAPTEETVLKLRPDAKGPRPEPLREKEQEGKEPDAYDKMNALGLVRLEVSKGTLSSLAYFGYFNAMVLWSLVALANFLVSEGSRCAAPTK---------------------------------------------------------------------------------------RTIGWTTLTLSAALIRAVWCNVRLVGLLGLDNDHGKFALFCGFCGLFLAAACAAMSPADFFFFDVRGVATGLHLWA------SEVVEMMGLRGAGLNEDDFTAIFLPMVALLAAGVTAAAALPSIRFAQFYHRALERGSGASLCHRALLVADLLLPWLTTLVWVRPVVSLPVFGRLFAGHGLEGAARAAAMASWGVRVWVTAATAGLRLAVGRRQLQMFLDGVKEAVLQDLREKKVSVYAVRSKFEARFQYLVIAAAQYAAPALTILLSLALLIHAGGXXGHGIAIAGN--TASIGICDAARRVVGAPAWHEAVAAGRAAAAAAMRGGSEGEGAEMGAGTAGDRGSSSSGGIPRLPEAVWSGALGFLLWWACLSWAMSYSIGVVFWRLYPEDTGVKERAPRDRTTKGKR 557
            LL +L YFH PELVGS L++YV+H V  T NIPHLFLNGLK I+APT+E VL++R DAKGPRPEPL + ++EGK+ +AYDKM+ALGL R+EVS+GTL  L YF  +  MVLW+++AL NF +++GSRCA PT+                                                                                       R +GW +LTL  AL+R  WCNVRL+ LLGL+ND+ KFAL  GFCGLF AAA AAM P  F  FDVR  A  LH W       S+     G   A ++ +DF A+FLP VA++AA VTAAAALP+IRF+Q++ RAL RGSGA+L +RALLV D +LPWL +LVW+  V  L V G  + G     A RA A+     RV VT   A  RLAVG+ QLQ +L+GVKE+VL DLREKKV   +VRSKF+AR QYLVIAAAQYAAPALT+L SLALL+H G     G   +G    A +G+CDAARRVVG  +W  A AA   AA A             G G  G     S+  IP  PEA WSG  GFL WWACLSWA++Y++GV FW ++PED  V ER P DRTTKGK+
Sbjct:    9 LLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPTQEAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNFFIAQGSRCAIPTQTKCEHRGSAKKEKSPRSGAFCTANLVHSLPSAFFDALRCPPTSSFGVPIAHLDSCLLLLPQTPFTPSFSLALFDVLLLLWRDPSGGGRPLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPPSFLAFDVRAAAAALHAWGGAVRGGSDAAVPPGGVSAVVSREDFLAMFLPTVAVVAACVTAAAALPAIRFSQYFSRALGRGSGATLVYRALLVVDGVLPWLASLVWISEVPPL-VLGERWGGGD---AGRALAL-----RVGVTGLAAWARLAVGKLQLQAYLEGVKESVLVDLREKKVDSQSVRSKFDARLQYLVIAAAQYAAPALTVLFSLALLVHVGDAATGGDLASGTGGRAGLGVCDAARRVVGLESWGTAFAAAAGAAEAPNSXXXXXXXXXXGLGGGGLAAFIST--IPEFPEAFWSGVTGFLAWWACLSWAVTYAVGVAFWFVFPEDVSVTERVPTDRTTKGKK 626

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig609.13790.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig609.13790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6G6_ECTSI	8.050e-168	48.81	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019395	Transmembrane protein 161A/B	PFAM	PF10268	Tmemb_161AB	coord: 36..535 e-value: 8.7E-30 score: 103.8
IPR019395	Transmembrane protein 161A/B	PANTHER	PTHR13624	FAMILY NOT NAMED	coord: 40..536
None	No IPR available	PANTHER	PTHR13624:SF6	DBJ\|BAA83359.1	coord: 40..536
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 401..424
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 425..514
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 293..314
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 216..232
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 362..400
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..146
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 538..580
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 315..333
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 515..537
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 147..157
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 212..215
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 252..272
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 182..192
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..124
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 334..361
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 158..181
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..16
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 193..211
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 273..292
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 233..251
None	No IPR available	TMHMM	TMhelix		coord: 159..181
None	No IPR available	TMHMM	TMhelix		coord: 122..144
None	No IPR available	TMHMM	TMhelix		coord: 253..275
None	No IPR available	TMHMM	TMhelix		coord: 296..318
None	No IPR available	TMHMM	TMhelix		coord: 338..360
None	No IPR available	TMHMM	TMhelix		coord: 193..215
None	No IPR available	TMHMM	TMhelix		coord: 402..424
None	No IPR available	TMHMM	TMhelix		coord: 514..536

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig609	contig	H-paniculata_contig609:15337..32823 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig609.13790.1	mRNA_H-paniculata_contig609.13790.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig609 15337..32823 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig609.13790.1 ID=prot_H-paniculata_contig609.13790.1|Name=mRNA_H-paniculata_contig609.13790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=581bp
PRLITLSTAAAMAASAARYGGNLLLHILEYFHEPELVGSGLVIYVIHAVS
QTTNIPHLFLNGLKVIIAPTEETVLKLRPDAKGPRPEPLREKEQEGKEPD
AYDKMNALGLVRLEVSKGTLSSLAYFGYFNAMVLWSLVALANFLVSEGSR
CAAPTKRTIGWTTLTLSAALIRAVWCNVRLVGLLGLDNDHGKFALFCGFC
GLFLAAACAAMSPADFFFFDVRGVATGLHLWASEVVEMMGLRGAGLNEDD
FTAIFLPMVALLAAGVTAAAALPSIRFAQFYHRALERGSGASLCHRALLV
ADLLLPWLTTLVWVRPVVSLPVFGRLFAGHGLEGAARAAAMASWGVRVWV
TAATAGLRLAVGRRQLQMFLDGVKEAVLQDLREKKVSVYAVRSKFEARFQ
YLVIAAAQYAAPALTILLSLALLIHAGGGGGHGIAIAGNTASIGICDAAR
RVVGAPAWHEAVAAGRAAAAAAMRGGSEGEGAEMGAGTAGDRGSSSSGGI
PRLPEAVWSGALGFLLWWACLSWAMSYSIGVVFWRLYPEDTGVKERAPRD
RTTKGKRGEKDGRGKGKGKGKAAGVVKGGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019395	Transmembrane_161A/B