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Homology
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: D7G6G8_ECTSI (Dynein 18 kDa light chain, flagellar outer arm n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G8_ECTSI) HSP 1 Score: 274 bits (701), Expect = 1.150e-86 Identity = 137/151 (90.73%), Postives = 145/151 (96.03%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLTAS 670
MSLSQEEIDAC EAFREVDVGRRG+I+VWELRIVLQELGQNPTDKEFFEVVSTVDREMKG+IDF SFLKIVASQK V+S WSGD+GDL+DAFVACGG+PDETG ADV+KIVKIVKTDFGLDVDIE IIDTLDVDGAGQLGFAQFKEMLTAS
Sbjct: 1 MSLSQEEIDACQEAFREVDVGRRGNINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGLIDFTSFLKIVASQKSVRSIWSGDSGDLVDAFVACGGNPDETGSADVDKIVKIVKTDFGLDVDIEAIIDTLDVDGAGQLGFAQFKEMLTAS 151
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A812ZLM1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZLM1_SYMMI) HSP 1 Score: 160 bits (404), Expect = 6.930e-43 Identity = 74/149 (49.66%), Postives = 107/149 (71.81%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
M LSQEEID C EAF D R G ID+WELR VL+ +GQ+PT++E F+++S VD M G IDF+ FLK++ +QK S+ D D+IDA+VACGG PD++G + +++I+K DFGL ++IE +I+ +D DG+G++ F +FK +LT
Sbjct: 5 MVLSQEEIDGCREAFLAFDKDRSGTIDIWELRQVLEAMGQSPTEEELFQMISEVDENMSGAIDFSEFLKVIENQKERAESFD-DESDMIDAYVACGGQPDKSGHVARDTLIRIIKQDFGLPINIEELINKVDTDGSGEIEFDEFKTLLT 152
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: F0WBF6_9STRA (Dynein light chain putative n=15 Tax=Oomycota TaxID=4762 RepID=F0WBF6_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.740e-42 Identity = 77/150 (51.33%), Postives = 109/150 (72.67%), Query Frame = 2
Query: 215 RMSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
+M L+Q+EIDAC EAF D R G IDVWELR VLQ +GQ PT++E F+++S VD +M G IDF FL+++ +QK +++ D+ D+IDAFVACGG D++GF ++KI+K DFGL ++IE +I+ LDVDG G++ F +FK +LT
Sbjct: 27 KMVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLQAMGQQPTEEELFQMISEVDNDMSGAIDFAEFLQVIDNQKD-RAALYDDDSDMIDAFVACGGSSDKSGFVRKEGLIKIIKQDFGLTINIEEMINKLDVDGNGKIKFKEFKAILT 175
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A6U3V7I8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3V7I8_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.590e-42 Identity = 78/150 (52.00%), Postives = 105/150 (70.00%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLTA 667
M LSQEEID+C AF D R G IDVWELR VL+ +GQ PT+ E F+++S VD M G IDF FLK+V SQKR ++ +N D+IDAFVACGG PD +G ++KI+K DFGL +DIE +I+ +D DG+G++ F +FK +L++
Sbjct: 1 MVLSQEEIDSCRGAFLAFDKDRSGTIDVWELRQVLEAMGQAPTEDELFQMISEVDDNMSGSIDFGEFLKVVESQKRRAENFDDEN-DMIDAFVACGGMPDRSGHVKRETLIKIIKHDFGLMIDIEELINKIDTDGSGEIEFEEFKILLSS 149
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A485KGT0_9STRA (Aste57867_5639 protein n=8 Tax=Oomycota TaxID=4762 RepID=A0A485KGT0_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.670e-41 Identity = 75/149 (50.34%), Postives = 108/149 (72.48%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
M L+Q+EIDAC EAF D R G IDVWELR VL+ +GQ PT++E F+++S VD +M G IDF FL+++ +QK +++ D D+IDAFVACGG PD+TG + +VKI+K DFGL ++IE +I+ LD++ +G++ F +FK +LT
Sbjct: 1 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLEAMGQQPTEEELFQMISEVDEDMSGAIDFAEFLQVIDNQKD-RAALYNDESDMIDAFVACGGKPDKTGVVKRDTLVKIIKLDFGLTINIEEMINKLDINQSGEIEFDEFKAILT 148
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A835Z187_9STRA (EF hand-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z187_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.670e-41 Identity = 75/149 (50.34%), Postives = 107/149 (71.81%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
M L+QEEID C +AF D R G+IDVWELR VL+ +GQ PT++E F+++S VD M G IDF+ FLK++ +QK S+ D D+IDAFVACGG +++G + +VKI+K DFGL +DIE +I+ +DVDG+G++ F +FK +L+
Sbjct: 1 MVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFSEFLKVIENQKMRAESFD-DETDMIDAFVACGGLANKSGHVKRDTLVKIIKQDFGLTIDIEDLINRIDVDGSGEIEFEEFKTLLS 148
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A812KW91_SYMMI (Calmodulin n=6 Tax=cellular organisms TaxID=131567 RepID=A0A812KW91_SYMMI) HSP 1 Score: 155 bits (391), Expect = 4.480e-41 Identity = 75/149 (50.34%), Postives = 103/149 (69.13%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
M LSQEEID C EAF D R G IDVWELR VL+ +GQ PT++E F+++S VD M G IDF FLK++ +QK ++ D D+IDAFVACGG D++G +V+I+K DFGL +DIE +I+ +D DG+G++ F +FK +L+
Sbjct: 1 MVLSQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSIDFAEFLKVIENQKERAENFD-DESDMIDAFVACGGLQDKSGHVKRETLVRIIKHDFGLTIDIEELINKIDTDGSGEIEFEEFKTLLS 148
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: D8LKX2_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX2_ECTSI) HSP 1 Score: 155 bits (393), Expect = 5.490e-41 Identity = 75/151 (49.67%), Postives = 105/151 (69.54%), Query Frame = 2
Query: 212 ERMSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
E M L+QEEID C +AF D R G+IDVWELR VL+ +GQ PT++E F+++S VD M G IDF FLK++ +QK ++ D D+IDAFVACGG D+TG +VKI+K DFGL ++IE +I+ +D DG+G++ F +FK +L+
Sbjct: 27 EGMVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFD-DETDMIDAFVACGGRMDKTGHVKRGALVKIIKVDFGLTINIEDLINKIDADGSGEIEFPEFKALLS 176
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A7S1XYK3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYK3_9STRA) HSP 1 Score: 156 bits (394), Expect = 7.020e-41 Identity = 78/160 (48.75%), Postives = 107/160 (66.88%), Query Frame = 2
Query: 191 SRVQPTRER--MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
S QP + M L+QEEID C EAF D R G IDVWELR VL+ +GQ PT++E F+++S VD M G IDF FLK++ +QK ++ D D+IDAFVACGG PD+ G +VKI+K DFGL +DIE +I+ +D DG+G++ F +F+ +L+
Sbjct: 37 SSAQPGNPKVTMVLTQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSIDFAEFLKVIENQKDRAENFD-DETDMIDAFVACGGRPDKEGNVKRETLVKIIKQDFGLTIDIEELINKIDTDGSGEIEFEEFRTLLS 195
BLAST of mRNA_H-paniculata_contig609.13788.1 vs. uniprot
Match: A0A7S2GY36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GY36_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.200e-40 Identity = 75/149 (50.34%), Postives = 104/149 (69.80%), Query Frame = 2
Query: 218 MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPDETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLT 664
M LSQ+EID C EAF D + G IDVWELR VL+ +GQ PT++E F+++S VD M G IDF FL ++ +QK S+ +N D+IDAFVACGG D+TG + +VKI+KTDFGL +DIE +I+ +D DG+G++ F +F +L+
Sbjct: 1 MVLSQDEIDGCREAFLAFDKDQSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFAEFLLVIENQKSRAESFDDEN-DMIDAFVACGGKADKTGHVKRDTLVKIIKTDFGLTIDIEDLINKIDTDGSGKIEFDEFMTLLS 148
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 277.3 |
| Seed ortholog evalue | 4.2e-72 |
| Seed eggNOG ortholog | 2880.D7G6G8 |
| KEGG ko | ko:K02183 |
| KEGG Pathway | ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005623,GO:0005929,GO:0031514,GO:0042995,GO:0043226,GO:0044464,GO:0120025 |
| EggNOG free text desc. | Ca2 -binding protein (EF-Hand superfamily |
| EggNOG OGs | COG5126@1,KOG0027@2759 |
| Ec32 ortholog description | Dynein 18 kDa light chain, flagellar outer arm |
| Ec32 ortholog | Ec-05_006150.1 |
| COG Functional cat. | DTZ |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko03036,ko04131,ko04147 |
| Exons | 5 |
| Model size | 1727 |
| Cds size | 456 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig609.13788.1 >prot_H-paniculata_contig609.13788.1 ID=prot_H-paniculata_contig609.13788.1|Name=mRNA_H-paniculata_contig609.13788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MSLSQEEIDACHEAFREVDVGRRGHIDVWELRIVLQELGQNPTDKEFFEV
VSTVDREMKGVIDFNSFLKIVASQKRVKSSWSGDNGDLIDAFVACGGHPD
ETGFADVNKIVKIVKTDFGLDVDIEGIIDTLDVDGAGQLGFAQFKEMLTA
S* back to topmRNA from alignment at H-paniculata_contig609:700..14089+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig609.13788.1 ID=mRNA_H-paniculata_contig609.13788.1|Name=mRNA_H-paniculata_contig609.13788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13390bp|location=Sequence derived from alignment at H-paniculata_contig609:700..14089+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGACTTCGAAGAATAGAAGGAGGATGGTGACTCATTCCAAGGCCTAGGC
TGAACGAGCGAGAGAGAAAAGGCCTGGAGTAATTGTTGTGAGGTATTTAA
GATGAATGTACTAGAAGAACAGATAAACTTCAGTAGAAGCCACCACAAAA
TATGTCACAAATGTTCCTCACAGTCGGTGGTACTCTCACAGACAGCGGTA
TGGGAAAGCAGCAGGAGGCCTGTCGCCTCGACCGATGTATGTTGTGCGAA
CATGTTCTCCAGTCAAGAGACACCGCATTTTAAAACCTACGGTTACGAGC
TCTTGATAAGCTGTGTGCCTCGTACAATGCAGCGGGTTCTCCTCTGTTTG
ACCAACGTTTTTCATCCATCCCACTCGCAAAATGGCCTGTATTACTGTGC
GTTCCTACTAATCAACATTGCCCCTGACAGGAATTATTGGCGGCGGCGCA
GCCATCGACAGCGCAGCCATCAACGGCACAGCCCTCGACGGGGTGTGTGG
TGGTGGGTCCGGTGGGTCTGATTAGAGGTCCCGCGTTCAGCCAACGCGAG
AACGTATGTCGCTATCCCAGGAGGAAATAGATGCGTGTCACGAGGCCTTT
CGGGAGGTGGACGTCGGAAGGCGGGGGCATATCGATGTATGGGAGCTGCG
CATCGTACTACAAGGTGCAGTACAGTAGCATTTGAGTCTCTCATAGTGCT
CCCTCAGTAGGTGGGCTGAGAAATGTGCGCTGAACCATACAGGCGAAAGA
AGATGCACACGCAAAATGCTCAAGATCAAAGCGGGTCGTTCCTTGAGTAC
CTAACTGGAACGCAAGGGGGAATTATTGACCCCCTCGGCCAGTGTTGCCC
TGGCCTAGGTGTCGAAGTCGCTATTACTACAACAATACAATTTTTTCACT
GCCTTGCTTCAAGTTGCTGAACCGCAGTCGGAGGAATTACAGTGTTTGCG
TGTAACATATTTTACTAACTTTTCTTTTTTTACAGAATATCGCCATTTGA
AGCGCTAAGCCGTGGAAATAATTTTTAAAAAACCTTGTGCGCATAAGTCT
AAGCAGATTGTCTTAGACGCACCCTATGAAACTACTCAGGGGTACCCCTG
TGTTTATTTTCAATGTTTTCACCCTTCACAACACAGAAACCGCCCTACGT
CGCAACGTGGATCTCGAAGTGCAGACAAGAAGGGGTTGCCATCGAAGACA
GTAGGGATAGGCGGCAACACTGTCCGATCCTTCCTCATCTAGCACACCAA
TGCCAGAAGGAAGGCTGCGTGCGCGCTGATGTCCTCCTTCTCCTCGTCCG
CCTGGGCTTCTTCAGCGTGTACAAATAGCACGGCTGCGGTGCGAACGTAC
AGCTTGATCCACACCAGCTCCCCAGCGCTAAGTGCGCCATGCCGGCGATT
AATCTGCACCTCTATTATGGGGTGCCGTCTAGTCATGTTCGAAGGGATAC
GGGGTGTACTCTGATCTCTCGGTTGCCTGCCACTCCGCACCCCCAACACG
AGACGAGATCATAGTGGTATTGTACTGTGTAATCCTGAAACCAAACCATC
ATGCACATGTAACGGTATTCGGGGAGTGTTGACCAACCACAGTGCTCCGC
CAAACTCTAGGAAAATATCTGTGAAAAAGTTCACTTTTTATCACTAGGAT
TTAACTTTTCACAACTTTTCGTAGCAAATTGTCGTGACTTTCGCGTTTCC
GTCGGTAACGAGGGAATTGTAAAAAAGAAAAGGTAAAATATATTATACGC
AAACACTGTACTGCGTATATGTGTGTTTAACCACTGTAAATACACAGAAC
GTGAATTTCTGGAGAAATTTCCAAGAAAACCAAATGTAAGGACGCAACTT
CCTTGCCGTCAGGACAATAGGGAGTTTCGAGAAAAAGAAGAAAAGTATTT
TTTTTCTCTGGATTCCGGCTCGGAGTCGGGATTTGGTTGATGCATGACTT
TCCCCCCAATTATTTTCCTGAGCCAGACCCTGAAGCAAAAAAAAAATGTT
CAGGATTATTTTTAGAAAAAATGGTCCTGACCCTGAGAGTGTTTGGTTTT
ATCGATTGCTGCTCACGCTCTCAGAATTAGATTTGGGTCATGGGCGTCCT
GCGGACCGCAACATACATGTCATGTGGCCCACGAAAATATACACCCTCCG
ACAGCCCTCACATTCCGACACACACACACACACACACACACACACACAAA
CAGTAGTCTCAGACACAGACAGACACAACGCAAGGCTCCCCATGGAAGAA
CATCAAACCGGCCGAAGACACAAGCACAACACACAGTCGTTGACTACGGC
AGTTGCGGATGCTGATAACGCTGAGCAGTCGTTCAAACAGCTCGGGATTG
GTGTTGAAATAGAGAGCTTACAGTACGTGTATTCATGTCATCATAGTTCA
CAGACCAAAATTACTCTCCTTGTGTACTTATCTTTTAGGGATAGTGTCCT
ATAGCACCGCTGCATGTACGTCTGGGAGTAGGATACCCTATCTACTCACC
GGCGGTACTTGCCTGATAGGTCAAGGACGAAATGCAAGCAACACGCTCAT
TACTGGGTATGCATGATCAGAGTACCAGTACAGTCAGTAGTACTACATGT
ACTGGCTGTGCTACTTCTATACTGTTTTACGTCCTCTGTCCCATATATAA
TGTAATTCTCGATTACAGAGAGCCACTTAACCATCTCCGCTTTTATATTT
TCTTTTTTATATTAGAATCCTACATGTTTGGGATGTATCCCAATTTTTGG
GGTCAAACACTTGAGTGTTAACACCAAAACGGGACGATCCCCAAGCAGCC
AATGAGGTACATATACCCAACTTGGGCAAAGAACCACATGTCCGAGTGCA
GACCACAGAGTAACTGCAGCTGAAGCCAAACCATCGCAAGTGCCCTGCGT
CTGATCCGTTCCTGGATCCGTACTATAGACATGTTCTACGGCTGCTGTGT
TGGGTGTTACTGGCGTCTCCAGTCTTCACAGAGTATATCTTCACTTTCGA
ATTGATACATGATCGATACAAATTTCCGGGTCAACGAGGCAAGGTTTGTA
CCTGTTCACGCAGTTTGACAAGCCACGTCATAGTCGATTCCGCCTAACCC
AAATCCTGAGATGTTGGAAAATGTTGGACTTTTTTGTCTTGGGATTTTGC
TATCCTCAGTTAAAGTCCTGAGAAAAATCCTGAGACAGGAACCATTTTTT
GTCCGAAAGTCTCTATTAGCTCTAGGGCCCTTCTAAACGTGGATTAAACA
TGTTTTTGTTCCCCTTTTTTCTCCGTTCTGCCGATAACACGCGAAATCAT
CTCGGAAGAATCGAAAAAGCTTGAAAATTGGTTCAGGAACACTGGAAGCA
GAAATGTCACTTGTTTGTTTATGCACTTTCGAAAAATTCGAAGAGGTGAT
AACAAGGGGAAGGGAACCGAAAAAAAAACAGAAAAAGGGGGGTGAAAGCA
ACGTTTAGAACGGCCCTAATAAGAGAGTGTCCTGTAGCTATTCGGGAAGA
GCTTGTGCACGTTTTTTGCTTCTTACAGGATTCAGCTATTCTTCGCGCAG
CCGATGATAGCGAGCAACTTGAACCAATGCAACCATCATGCCTTTTCGTT
CGATAAACTTTCACCCCCCGGATAAATACAAATACTTGCAAATGATTTTC
ACATACAACTGAAAGTATTCCCCTGAGTTTCACAATCAGCGGACACATAG
AATAAAGAACCCACCCCTGTCCATTGCATTTAAGAGTATTATTAGCAGTC
GTGGATGTTCCAGGGCATTTAGAATACTTTCCTATTGTAACAACATCAAC
TCGACTACCAGTCCACTGCTACTGAATTCCGAAAATGAACTCGATTACCA
GTCGACCGCTCTGCAAGGGCCGTAACGTCGCTACTCTGCGATTGCGTTTC
GCTGGAACTTGTCGAGTCGTTTTTAACGATGCCAGCGTTGGGTGTTCATT
TTCGCAGAGCTGTGTCGCCATTGAAATACGTTTTTTTTGTCCTCGAGTTT
GTTGGTCGGTTGCTGAACGGGTCGCTTTGTTTGATTTTCCTTCCGGTCGA
CCAATTTGGATAGGGTTGCAGATGTTTGATTGGCCTTGTCGCGAATCTTT
GTGCTTTGCCTTTTTGCGTTAAATCATTTCATTTTCGGAATCTAGGATTT
ACACATTTTCGTCTGTGCGATGTCGAACGAACCAAGTTTCAATTTTCAAC
ATATATATATGAAGATAATGGAAAGTGGGGAAGGGTTCTTCACAGAATAG
GTGTTGAGGTGTTGAGAGGACTTGGCCGCTGCCGTGCGGGTGGGAGCCTC
ATTCTTCGAGGGAAGTTTGTAGGAAGGGTGGAGGCATATAAAGGACTATT
ATTTCTTCGTGACAAGAGGTTTTTTGGTTCGTTGACTTACCGAGGACTCT
TGGGATGATATCAGGTTTATCGCAGCTTCTCTACACTATTTTCGAGTCTT
CACAGTCGGAAGATAGCTAGTAGTATATACTCCCTCCGTCCCATAAGTTT
GTGATGTTAAGGGTGTAACTTGTTGCAGTGACTTCCAAATCAAAAACGTT
TTTTGGGTCGGATACCTAGGTGTTTTTCACGTTCGTTTTGTTCTTCGCAG
CTTTCCTCGTTCCCATCAATCCACCATTCTACTGCCGCGTCGAAAGCCTC
TTGGTCGATTTTGACCGATTTTGGCAGTCTTCCCGCACGCTACCTTTTCT
TGGTTTCGGTATGCTGTACCTCGAAATCGTTACCCCCTAGCGCTTTCAAG
ACCTGATTGTACCGCTTGAAGAGGCTCTGCCACCGCCTCTAAGGTTGCCG
CGTCGCATGCATCGTACATGGTCTTTACCCTCTCCACAAGGCAGTCTATC
GAACCGTAACGCTCCCTCCAAACCCTACTTTTCAGAGATGCGAAGAACCC
CAAATCGTTGATGTTGAAATCTGGTGACTGCGCAGGCTGAGTTACGAGAT
TAACTTTCCACCCCCCGTCCCTCCCGATTTCGTTAAGCTTCCGCGGCGTG
TCGTTGCCCGTGTGCGGGGTCGCTCCGTCCTGCTGCACGACCACTTCCTC
ACCCTCCAACCATGGCATATTTCCCTTCAATGCTGGTAGAAAAGAGTCCT
TGTACCACTCCTGGTACCACATGGCGTCAATGGTTACGTCGAACTCGTAT
TGCTACCCCCTTCACACTGGGCCGAATCCCTCTGTGCCTGCTTGATTATG
CAAACGCGCCAGATTCCAATCTTGACATCGAAATGACGGGAAGGATCTGC
ACGCGAAACGGCTCAGATAAACATCACCTTAAGAATGTGACTCTTGTACT
GTACTTTGGTGGACCCCACCCTTTCCTCCCCGGGGAACATGCGGACGCCA
TCCCTATCGCGAATTAGGTAAACAATGCTCCGTGAATGTCAATTGTTTCG
AAGCCGCTCCTGAAAGTAATGCAGTTCCTTACTGCTTGATCTAGGATGAA
GTCTATCCGTTTCTTTCGATGCGTCAGCGACAGAGATGGTGGTAATGTGC
CGTTTCACCCTCGTGGTGCCCATCTCTTTGAGCCATCCCTGAAGCTTTGA
GCTGCCGACTACGAGACCAACTTCGGCTAGCTTGGCAGACAGTTGATCGA
GGGTCAGGGTTCGATTCGCGGCGTCGACCCTACGAATCGTGCGGTGCTTT
ATCAGTGTGAAGTCCGACGGCCGCCCGCTTCGTGACCCTGACCTCAGCAA
AATGGTATTGCCATGGTCCATTTGTTCTCGTACACGCGCCCAAAGTTGTC
TGGGATATTGGTCGCCAACTTCAAACTGCTTCGCCAACTCTGGCCCAACG
CCTTTCGGAAGCCATTTCTTACAGGGAGGTAGCGCTAAAGTGTACCGTAC
GGCCAATGCATTTCGCCTTTCCTCGCTCAGCTCGCAATTTTTACCCCGGG
CTGATGGGCCCTTGGCAAAAGATGCCGGACTCGCCGGAGTGGTAATGTTG
GTTGCGAAACTCGCGCCGCAGACGGTCTGGAGGCTGCACGAGAGTCGTAC
TGCTATTGGTGAGGTGCTGAGGTTTTGTGTGACGATAGGGGGGCCCTTTT
GTCCTCACCCTGACGCAGGGCAGCCACTCAAAATGGAGCCGATAAGGGCC
GTTTTTTAGTTCCCCTTTTCGCGAAAGTTTCGGAACTATTTCGGAACAAC
ATGCGAGAATGAAATAATTATTCTTGAAGTTTACGTCCATAAGTTCAATT
CAAGCCATACATGCCCGAAAAACTCTTCCTCTTCGTAGAGAAACGACCTA
CACATGAAATGAGAAATTATAACTTCGCAGACTTATGAGACGGAGGGAGT
AATATGAGTACAATCGTAAAATGTCACATGCAGCGTGATGCGCTAACCTT
TGAAATATGCAGCATTCGAAACGGTTACATCGCGAACCGATCGCCTTCAC
TCACACTCGGGGAATCTTTGGAAGATGACTCGTTTGTCGCAGTAGTCGAT
TATCAGTCGTGGGCGATTTTCGGAAATCAGTCGCACCAGTCGACTGGTAG
TCAAATCCATTTTCGGAAGTCGGTCGAACCAGTCGACTGGTAGTCGACTT
CATTTTTGGAGTTCAGTCAACAGGTAATCGACTGGTAGTCGAGTCCATTT
TTGGAATTCAATCACACCAGTCGACGAACAACGACTAAAGAGTCGCCCGA
AATGTAAAACTTCCCGTTCTCGGCTAAAACAGCGCAACGCCATTCTGAGA
ATCGCTCGCCTAGAGCAAGACCAGAAAATTAGGTTTTAGATTACAATAGA
TAAGAGATCGCGTTGCTGGCGATGATGGAGAACATCGAAGCATATGCTAT
AACAAACCTCCAACGGATCAGTTTACACCATATATCCGTATTTCAACACA
TGCGCTTTGTAATGCCTCTCAACATGCCATGTAGTCTCACTGGCCGCCCT
TTGGCGAGAAAAAGAGTGAAGAAGATTTTGTGAGTATGATAACGTCGCAC
GAACCGTGAAGCTCAGTTTATGTGCTGACTTCTGGGCTGTCCCCAGTTTT
AGGTGCGCCCTTGGAAAAACGAAATTCTAAGCTGACATTGCCCCCTTGAT
CCGCTCGAGAAAACTGTACATGATATCAGGCCCAACGGCGTCAACTTCTC
AGCAATGTCTTGACCCTAGAAGCGCGCAGGTAGTTTCGGAACTAAAACGT
TACCTGACGACATATACGAAGCGCTGTGATCCTTGTGGGCAGAACCCTGC
CCACTACTCGCCTCTGCTGTATTTCATATCTTTGCTGGACTGTCTGTCTG
AGCAGCGCCGACTCCCTATCCCGGGAGACATTTTATCCGTTTCATTTCCC
CGTTGTTTTTACGGTATGGACTAGATGGGGATTTGATGGAAACCTGCGCT
CGAAGGGGTAAGTAGAGGCCATACAAGCAGCGCTGTTTGGTTTCGTTTTG
TTCATCGTGCGCGTTTCTTTTGGCCTTCCCAACGATTCTCCTCTTTCACC
AGAACTCGGGCAGAACCCAACGGACAAGGAGTTCTTCGAGGTTGTGAGCA
CAGTTGATCGAGAAATGAAGGGCGTCATAGGTGAGTGACACACGCAGATA
GATACACACGCACATATACAGCGAGAAAGACAGACGCAGAACACGTTCGT
TGGTCAACCCTCAGCGTACGGTCCCGAACTTATCAACATCCACAACCACA
GTGAAAATCTGACTGGAGAACATAGTCGCCAACAAAGAAACCACGCCATC
CTCAAGTTTCCGAGGTCAGCCCATGAAGATTTCCAAAGGATATAGCAGAT
GACTCTAACAACACTGGTGAGCTACAACTCTTGTCTCCGGGCTGACCCGT
GATGTCGAGCGAAGATAGTTGCGTTGCGAAATGACCATATGTCGAGAAAA
ATGTAGCCCACCCGAACAGGTACTTTTTCCGGTAGAAGCACTCGGAGTAC
ATTTGACATATGCGGTAAGGCACCACACCGCTTACGTTGATTGTGAACGG
GACGTTGACTAACTAACGAATGGTCCGGAAGGTGAAGGCAACCATGTAAG
GCGTGGACTTGCTTTTTCACGCCAATATTTTGCTATATTCCCGGCATTTC
GAAACACGCAGAAAGAAGACGATGGGCTCCTTGTCTAATCATGCAACCCA
CACCACATATTAGTCGGCTACAGTAAAGTAAGACGGCGACGTCTAGACCG
ACAAAACACTTGGATAAAGTATCAAGACGCCTCCAGAAAGCACCGCCCTC
ACTCACCAAGAAAACACACGAAGATTGTGTCAAAAGGCTGTGGCGAAAAA
ATCTCTCTCGCCTTATCTCCACTTGTGGACACGAGTTTCCACCCATTCGT
ACGCGCTGTGAGTGGTGGGCACCACTACACGTGCAATTTTTGGCGTTTTG
GAATAGTTCATGGCTCGACAGCCTCGGCGATTGGCCGACTTTGTTCGATG
AGGTCTAACCAGGTATATCACACAAACACAGCAACGAAGTAGTCAGGTTG
TTTGTCAGTGCGTTGTCCGAGAAGCAGAACTCAACTTTGTGTGAACACGG
CGATAATACCCATACCTATCTATCAACTTCTCGCGGATGACCCGGCAACC
AACCAGACGACACACAACTGGCCAGCTGGCCTTGAAAACACCTAAATTAG
CTCTACTGTCTTACTAATGATCCTGCTTTTGTAAAATACGCGGCCTTGGG
GTATTGTTGTGAAGGGCAGGTGTATGTTACTTGAATAAAAATTAATGATT
TCTTCGAAATATATCGACCTGATCCTCAGTTGTTGCGCTTTGGTCCCGCA
GCGCTACAGATTGATTACGACCGGGATGTGACGCAGCTCCTAGCAAATTG
GTGGGTGTAACAGACTGCGAAAGAAATGCTGCGTACATGTTCTCTGTTCT
TTTGTGGCAGTTTGAGGTCTGTCTGTATGCCAAAAGCGTGGAGGGTTCGG
GAAGTACACCACTCGACACCCCAGGATCCCACCGCACTCGCCATGTTCTG
CTGGATAGCATGTAGGAAGAATTTAGCGATGATTCCAAGTGAGGTCGAGC
AAAATCTTCCGATTTTGAAAGCTCAGGCTCAATGTTCTACTGGCAAGGCC
TTTGACCATTATTACAAGCGACGTCAATGTGGATTTCAATTTCAGAAAAA
ATCTCAAATTTCAGTCTCGATTTCACGACTATCATGTTACCTGTTCTAGC
CGCGTTCCATCATCACAGTTGAAACCAACAGTTGATAGTTGACCGTTGCT
ACTGGGCCATGCCAAATTATTAGATTCTGCCCGGCATCCGAAAGAACTTC
AGTGCGTTGGGCACTACAGTTTCTCGACAAGCATTAGACTTTGTCCAAAA
CGTCAGCGGGATCCGCGAAAATCGCCCAACCCCAGCTCACCCTAACCCAA
GCTAATCAACGCATGCTTCGCAAATAGGCCAGCTCAACCCAACATTGCTT
AGCACAAGCTGACTTGTAGTAATTCAAGCAGATTGGTGTCAAATGTCAAG
TTAAATCGGGAGATGCCAACTCACTCACTGTTATTGCCACTCAATGGTGA
CTAACATTGCAACTTTTATCATATCCTCTCCGCTACGCCCTCCCCCCTGT
CTGTCTCTGACTCTAAGTTCCCTTCTCTATTTGCTCATCTCCTTCTCTCG
CTCTGGATACATATCTCTTCCCTTGTCGATGATCCTCATCTATCCTGGCT
CCCCTTCGTGTAGATTTCAACTCGTTCCTCAAGATCGTGGCTAGCCAGAA
ACGTGTCAAGAGCAGCTGGAGTGGGGACAACGGAGATCTGAGTGAGTGTC
ACGACCTTTGCGAAGAGGTTCTTACACAGAATGTCGGCGAGATAACCGAT
GTATACAAACCAACACTTTTTTAACGAAAAAATACTTGAAAATGGATCTC
TAGGTTTCTAGATGCCATAGTAACTATTTGTTATATCTGCACAAAATAGT
ATTGTGAATTTGCATAACAGTTCTATTTTTGATATTTTCATTATCATGAA
ATTATTGTATTTTTTAGAAGTAAGTACTTATGATATTTTAAATGTGGAGA
GCGCGTTCCTGGCGTTCCTGGGATTCCCGAACCCCGACCCCCTATTCAAC
GACCGATACCGTTTTATCCCCATGTCGCAACAGCTTTCTAGCTGTGTCCG
ACCCAGGATAGCCAGTTCATCTACGACAGAACAAAACCCAAGGGCTTGCT
CCGCACTACATCCCAAGACGTAGAACCAACCCGCATAGAGCCAGCGGCGT
CCCCTCGAGAGCAAGTCTCTTCCGGGAGCATCGTGTTCTGATGAACATAA
TGAGAATATCTATATTGTAGGTATCTACCTGCCTAATATCGGAAAAATCA
CCAAGCACGATTGCGGTTCACTGCATGCCGGACCCGAATTGGAAATTCGT
AAACGCCAGCTCCAAGTCCCACAGCAGACACACAACATGCCAAGTGACAG
CATAGTACAGGGAGTATGTTTCAGATTCTTCTGGTAAAAATCTATGCATT
TTACATGAGTCGTATGTAAAGCATTCCTTGTTTCTGCAACACATATACGT
GAATTCACCATAGCAGCTTTTTTTATTGCATGATGAAGGTTCTTGGAACA
GGTTCTGTTATGTGCGCACGCTGCGATATTTTTTCCTTACACGTTCCAAC
TCGCTAATCTTCAAGCACGACTGCATTGCAGAGTATTAAACTAGCAATAC
TACGACACTACCATAATCCGCCACGTCAGGGTTTAGGGTATATTTTCCCT
CACACATCGCTTACTGCAAGTAGTCTAGAGCCAGAAGACGCCGATCCCTG
GCCTGCATCCACGACTTGGCGCTGAATCAGCAGCTATACAGCCCTCTATT
ATCGGCGACCCCAACAAATGATTGGCGGCAACCCGCCGATTTCCAGCTTC
AATTTCGGCGCTTCGTGATTTTGTGATCATAGTGTTTGTTTTTTTCAAGG
GTTTATTTTCGTTTTTTTCCATGTGTTGTGACGGCGTAGCCCGTAGCCTA
CGTGTCCTAGCGGTGCTACCATAGTCATTTAATGTGTTTGTCACGCGCAC
GTGTGGCTACCGCTATGTGTGTTCTGTTCTATACATACAGTTGAGACCGT
TTCGGGGGCCAACACGTATTCAAAGTTGAGGATGCAAACTTTTTCTAAAC
AATACCTTGAACCATGAATTGATGTTTCGGAATAAAAATGAATCTCACAA
AAAAACGAATGTCCAGGAAGAAAGAAAGAGCGTTGCTGATGTCGTTATGC
GCCGAATCGGGCCAACTCCCTGTATTTTCTATGCGTGAGCTATCCTAGGG
TAGGGGGAGGGTCAATTGTTTAGCACAGGCCGCTTCGCAAAGCGGCGCAA
AAATAACGCGAATCAGAACCATATCAATTGCATCTGTTTGTGCATTTCTA
AGGGTGCAAAGCACGAGTTGAAAAGGGATTTCTGTTTAAAGGGGGGGCAA
CCAATGCAAAAAACAAATGCCGATTCCCATCGCAAAGCGGCTCCTTCGTT
AAACAACGCGGCTCAAATACCCCGTCCCCCCTACCGTAGGATGACTCGCG
TATACTGTCTCTACTGGACTGGATGTCCTGACAGCGGTGGCTCTTACCCT
CGAAGTCACTTCATAAAATAGACGTCTGTTCTCCTCTGTTTCTGAGGTTG
GAATTAGAGCTCTAGATGAATAGGGATTAGACGGAATCCGGCGCTGAAAG
GGTTCACCTCCCGGACAAATACAAATACTTGCAGATAGTTTTCACAAAAG
ACCGAAAGTATTCGCCTGAGTTTCAGAATAAGCGGACACATAGAATAAAG
TACCCATCCCTGTCCAATCGATTTACGAGTATTATCAGCAGTTGTGGATA
GTCCGGGGCACATAGAATACACGAGCTCGTTCTGAAATCCAGGCGAATAC
ATTCATTTTTTTGAGAATTTCATTTGCAAGTATTCGTATTTGTCCGAGGT
GTGGAAAGTTTACCAAAAATACAACAAATGTTGTGTTAGTACCCCGCTGT
CGTCGTGTATTCAGCACAGCTCGCATCTGGCACAAGAGCAGGTCGAATAC
AACAAACGGTGCAACGAATTTTCCCTGATGTGTGGTGGATATATTCCAGT
AATACACCGAAGATATGTATGCGTTACTACCCCCCGCCCTCCCTCCACCC
CTCCCCACCCGCTTGCTTCCGATTTCCCGCCGCTTCAATCATCAGTCGAT
GCCTTCGTTGCGTGTGGCGGGCACCCGGACGAGACAGGATTTGCGGACGT
AAACAAGATCGTTAAGATCGTGAAGACGGACTTCGGCTTGGATGTGGATA
TCGAGGGCATCATTGACACGCTCGATGTGGATGGTGCCGGACAGCTGGGT
TTTGCACAATTCAAGGAGATGCTCACAGCTTCTTGATTTTTTAGCAACTG
ATACAATTGCTCTTGTGTATGTATTTTTTTTTGCAACGGCGGCTGTGAAA
TTGGATCATGTCCCTGTTGTGACGATTTTGAAGAAAGTGTTATGTTTATA
AGGGCGGGGGGGGGCGGGGGTGCGCGTGGACTACTAATTACTACATGTAC
CAGGGAGTATAGCTGTATCACTCGCTAGCGGCTGTGTGTGTTGTCGACAT
GGCAAACACAGGCACAGGATCGTGACCCCAGACTCCCGTAAGAATATTGA
TGCATGTGGTGTAAGCCCCCGCCCCATCACCTTTTTCATGTGCAACCGTA
ATTAATTACATAAAGCTAGGAAGGGTATTCAGTCTACAATCATGTTATAC
ACTCACAGCCAATTTTTATAGCAAACGAGGGGAGTGGAGGAGGGGTATAT
CAGTCGACGAAACCAATTCGGGAAGGATACTAGGAGTTTTGAGTCGTTTC
AACTGAAGGAGGGTGCATATATCCATTTTCGACCACAAGTTGTCTTGATT
TTAGTTTGGGATCATTTCTTTTTAGCCCTTGATCTTACGCTTAGCGGGTT
CAATTTTCACATCTTGGTCACATGCAAGTTGCTTACTCGATGACTTGGGC
ACAGAACAAGATTGGTGCCAAAAAGCAGGTCCGCACTCGAACTATTTCGA
CATTTAGCTCGAAACTTGACGCTTCTTCTCATTGTGTTGCCCCCCGTCCC
GTTCAGTTGAAACGGTTCTTTATGGCTGTTATAATTGTTTCGGCTTGTTT
GGTATGTAGTAAGCCTTTGTTGGCGCAGTTGGTGCGGAAATATCATGCTC
ACTTGCATCCACGGCGTGTTGGAATGTGCGTGTGCTACAGTGCCAATCGA
CTGGCCTACTCAATGGTAAAAAGAGGTGGCCGTGGTGGGCATGTGAAGAC
TGTATACTGCACTGCTGAATTGGATAGCTGTCAATCAACCAGGCTATGGA
TCATGCATTCGAGGGTATGTTTGTGTGTAGGATGTTGGAAAGGGTGCTCT
CTGTGGTCCAAGAAAAATTGAATGAAAAAAAATGTAGGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig609:700..14089+ >mRNA_H-paniculata_contig609.13788.1 ID=mRNA_H-paniculata_contig609.13788.1|Name=mRNA_H-paniculata_contig609.13788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at H-paniculata_contig609:700..14089+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGCTATCCCAGGAGGAAATAGATGCGTGTCACGAGGCCTTTCGGGA
GGTGGACGTCGGAAGGCGGGGGCATATCGATGTATGGGAGCTGCGCATCG
TACTACAAGATGTCGCTATCCCAGGAGGAAATAGATGCGTGTCACGAGGC
CTTTCGGGAGGTGGACGTCGGAAGGCGGGGGCATATCGATGTATGGGAGC
TGCGCATCGTACTACAAGAACTCGGGCAGAACCCAACGGACAAGGAGTTC
TTCGAGGTTGTGAGCACAGTTGATCGAGAAATGAAGGGCGTCATAGAACT
CGGGCAGAACCCAACGGACAAGGAGTTCTTCGAGGTTGTGAGCACAGTTG
ATCGAGAAATGAAGGGCGTCATAGATTTCAACTCGTTCCTCAAGATCGTG
GCTAGCCAGAAACGTGTCAAGAGCAGCTGGAGTGGGGACAACGGAGATCT
GAATTTCAACTCGTTCCTCAAGATCGTGGCTAGCCAGAAACGTGTCAAGA
GCAGCTGGAGTGGGGACAACGGAGATCTGATCGATGCCTTCGTTGCGTGT
GGCGGGCACCCGGACGAGACAGGATTTGCGGACGTAAACAAGATCGTTAA
GATCGTGAAGACGGACTTCGGCTTGGATGTGGATATCGAGGGCATCATTG
ACACGCTCGATGTGGATGGTGCCGGACAGCTGGGTTTTGCACAATTCAAG
GAGATGCTCACAGCTTCTTGATCGATGCCTTCGTTGCGTGTGGCGGGCAC
CCGGACGAGACAGGATTTGCGGACGTAAACAAGATCGTTAAGATCGTGAA
GACGGACTTCGGCTTGGATGTGGATATCGAGGGCATCATTGACACGCTCG
ATGTGGATGGTGCCGGACAGCTGGGTTTTGCACAATTCAAGGAGATGCTC
ACAGCTTCTTGA back to top
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