prot_H-paniculata_contig6089.13786.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6089.13786.1
Unique Nameprot_H-paniculata_contig6089.13786.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length141
Homology
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BLAST of mRNA_H-paniculata_contig6089.13786.1 vs. uniprot
Match: D7G8Z7_ECTSI (Similar to metalloprotease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z7_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 7.130e-23
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:   28 KVFTGELKWDRAAGMAETLKTITRAEVVELLDSYIMAEDKAKRMNVMVYGKNQQRPNIMSAESGDEKT-IELTPEGLQDFRESLPMQDTTWTPQQSVEAA 126
            +VF+G+LKWDRAA  AE LKTITR EV+ LL   ++  D AKR+NV+VYGKN  RP   S    DE T IEL PE LQ F  +L MQDTT TPQQ++  A
Sbjct:  101 EVFSGDLKWDRAAVKAELLKTITRQEVLALLGGEMLDGDGAKRLNVLVYGKNHPRPEHSSE---DETTAIELVPETLQAFTRTLAMQDTTVTPQQAIANA 197
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BLAST of mRNA_H-paniculata_contig6089.13786.1 vs. uniprot
Match: A0A6H5KRX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX7_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.740e-21
Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:   28 KVFTGELKWDRAAGMAETLKTITRAEVVELLDSYIMAEDKAKRMNVMVYGKNQQRPNIMSAESGDEKTIELTPEGLQDFRESLPMQDTTWTPQQSVEAA 126
            +VF+G+LKWDRAA  AE LKTITR EV++LL   ++  D AKR+NV+VYGKN  RP  +S +  +  TIEL PE LQ F  +L +QDTT TPQ+++  A
Sbjct: 1055 EVFSGDLKWDRAAVKAELLKTITRQEVLDLLGGEMLDGDGAKRLNVLVYGKNHPRPERISED--ETTTIELVPETLQTFTRTLAVQDTTVTPQEAIANA 1151
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6089.13786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Z7_ECTSI7.130e-2358.00Similar to metalloprotease n=1 Tax=Ectocarpus sili... [more]
A0A6H5KRX7_9PHAE1.740e-2154.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.830.10coord: 27..131
e-value: 2.2E-7
score: 32.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..140
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6089contigH-paniculata_contig6089:2170..5648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6089.13786.1mRNA_H-paniculata_contig6089.13786.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6089 1157..5928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6089.13786.1 ID=prot_H-paniculata_contig6089.13786.1|Name=mRNA_H-paniculata_contig6089.13786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MMFVVFYRCFVVVVVVVVLLFVYLIGIKVFTGELKWDRAAGMAETLKTIT
RAEVVELLDSYIMAEDKAKRMNVMVYGKNQQRPNIMSAESGDEKTIELTP
EGLQDFRESLPMQDTTWTPQQSVEAAKQRSSSSSSSSSSI*
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