prot_H-paniculata_contig60878.13783.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60878.13783.1
Unique Nameprot_H-paniculata_contig60878.13783.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A8D8KT35_CULPI (Copia protein n=6 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8KT35_CULPI)

HSP 1 Score: 77.8 bits (190), Expect = 1.560e-13
Identity = 55/169 (32.54%), Postives = 74/169 (43.79%), Query Frame = 0
Query:    1 KNVAETRVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYEICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQ--KFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVL 167
            K   +  VC+ C EPGH K+NCP+      K  G G +  + +    SD        G      WV DSGA+AHMT                +T+ANG    I G G   V   D GE Q  K S+S V  VP L T+L S+  +  +  +V   K+G +I      V+
Sbjct:  206 KRRKKPAVCYNCGEPGHFKVNCPELAEDQRKSAGGGNAKAKAA---QSDARCVAFTTGVERNARWVIDSGASAHMTNDRSFFTSLSEFDGGGITLANGTKTAICGVGSGEVVGID-GEAQPVKISISEVKFVPGLTTSLISVGKLAEKDFSVVFDKKGCSIVSAGSKVV 370          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: H3H5K9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5K9_PHYRM)

HSP 1 Score: 74.7 bits (182), Expect = 1.680e-12
Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    1 KNVAETR-VCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAR-EFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVLLCRKLG 173
            +N  E R  CF+CN+PGH+K +CP R                     ++ G  D V    T R   W+ DSGATAHMTP    + +YE + + + VT+A+G+ L + G G + +   D+  I+      V H+P LD  L S+  +  + L V  ++    I      + L +K+G
Sbjct:  214 RNTGEFRGKCFKCNQPGHMKRDCPVR---------------------NTGGDDDAVFAVGTERFNGWLIDSGATAHMTPHRSDLVEYEALDAGMEVTIADGKKLAVAGRGTVRLLGLDQKTIKMVD---VLHIPGLDRRLLSVGKLAERGLNVEFQRSSCVIWGNTSAIALGKKVG 365          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A6A3I090_9STRA (CCHC-type domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I090_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.120e-12
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 0
Query:    1 KNVAETR-VCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAR-EFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVLLCRKLG 173
            KN  + R  CF+CN+PGH+K +CP+R                     ++ G  D V    T R   W+ DSGATAHMTP    + +YE + + + VT+A+G+   + G G  L+   D+  I+      V H+  LD  L S+  +  + L V  ++    I      + L +K+G
Sbjct:  214 KNAGDFRGKCFKCNQPGHMKRDCPER---------------------NAGGDDDAVFAVGTERLNGWLIDSGATAHMTPHRSDLLEYEALDTTMEVTIADGKKFTVAGRGTALLLGLDQNRIKMVD---VLHISGLDRRLLSVGKLAERGLNVEFQRSSCVIWGNASAIALGKKVG 365          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A6G0QKW0_9STRA (CCHC-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QKW0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.120e-12
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 0
Query:    1 KNVAETR-VCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAR-EFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVLLCRKLG 173
            KN  + R  CF+CN+PGH+K +CP+R                     ++ G  D V    T R   W+ DSGATAHMTP    + +YE + + + VT+A+G+   + G G  L+   D+  I+      V H+  LD  L S+  +  + L V  ++    I      + L +K+G
Sbjct:  214 KNAGDFRGKCFKCNQPGHMKRDCPER---------------------NAGGDDDAVFAVGTERLNGWLIDSGATAHMTPHRSDLLEYEALDTTMEVTIADGKKFTVAGRGTALLLGLDQNRIKMVD---VLHISGLDRRLLSVGKLAERGLNVEFQRSSCVIWGNASAIALGKKVG 365          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.920e-12
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 0
Query:    2 NVAETRV-----CFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAI 159
            N++  R+     CF C++ GH+K     R CP  KG G  E      A+F++         G +    W+ DSGATAHMTP  E +FDY+ + +++ VT+A+G+ + + G G + +   D   I+      V H+P LD  L S+  +  + L V  ++    I
Sbjct:  110 NISRKRIGFEGKCFNCDKFGHMK-----RECPDFKGPGKNEED----AVFAA---------GESRSSGWLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSVGKLAERGLNVEFERTSCII 252          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A1W7R602_AEDAL (Putative copia-2 aa-i (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R602_AEDAL)

HSP 1 Score: 72.4 bits (176), Expect = 9.340e-12
Identity = 55/173 (31.79%), Postives = 76/173 (43.93%), Query Frame = 0
Query:    5 ETRVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHR--------LSAMFSSDG-FRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYEICSNLFVTVANGETLPIDGYGKMLVWMKD-RGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVL 167
            ++RVCF C +PGHLK NC Q +   C  + +   S +          A   SDG    +V +G  A   W  DSGAT HMT +       E      V +A+GE   + G G+    + D  GE  +  L  V  VP L + L S+  +  +   V     G  I  PNG V+
Sbjct:  219 DSRVCFYCKQPGHLKRNCRQFL-KECNKVENSTQSKKEDKSKAKASQAQSVSDGPLAWMVGYGEPAD--WYVDSGATRHMTGNRRFFSKLEEAKFASVILADGEKSEVRGVGEGRFHVIDGNGEAVEVMLHDVLFVPGLTSGLISVSALSKKGFGVVFNGSGCEIRRPNGEVV 388          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A6A3GEB1_9STRA (CCHC-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GEB1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.420e-11
Identity = 46/137 (33.58%), Postives = 69/137 (50.36%), Query Frame = 0
Query:    1 KNVAETR-VCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAR-EFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLD 134
            KN  + R  CF+CN+PGH+K +CP+R                     ++ G  D V    T R   W+ DSGATAHMTP    + +YE + + + VT+A+G+ L + G G + +   D+  I+      V H+P LD
Sbjct:  107 KNAGDFRGKCFKCNQPGHMKRDCPER---------------------NAGGDDDAVFAVGTERLNGWLIDSGATAHMTPHRSDLLEYEALDTTMEVTIADGKKLTVVGRGTVRLLGLDQNRIKMVD---VLHIPGLD 219          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A4Y2NNV2_ARAVE (CCHC-type domain-containing protein n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NNV2_ARAVE)

HSP 1 Score: 70.9 bits (172), Expect = 2.890e-11
Identity = 48/135 (35.56%), Postives = 65/135 (48.15%), Query Frame = 0
Query:    7 RVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAREFWVADSGATAHMTPSNELMFDY-EICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSL 140
            R C+ C +PGH+  +C ++                     S D F  IVE G T +E W+ADSGA+AHMT   +   D+ E  S   V V N   +   G G + V MK  G+     LS V +VPD+  NLFS+
Sbjct:  183 RKCYVCRKPGHIAKDCWKKD---------------RKQKTSGDAFVCIVE-GVTEKEQWIADSGASAHMTSYRKYFLDFKEFLSPKPVYVGNNNAIMTYGQGTVNVDMKVNGKWVSNHLSEVWYVPDVSRNLFSV 301          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.910e-11
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 0
Query:    1 KNVAETRVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYE-ICSNLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVLLCRKLG 173
            KN A    C+ C++ GH+K +CP               S+   A+F+       V  G +A   W+ DSGATAHMTP    +F+YE +  N+ VT+A+G+ + + G G + +   D   I+   +  V H+P LD  L S+  +  + ++V  ++    I   +  +   +K+G
Sbjct:  219 KNNAFKGKCYNCDQIGHMKRDCPS-----------SNVSNDEEAVFA-------VGKGRSAG--WLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRIK---MVEVLHIPGLDRRLLSVGKLAERGMSVEFQQNSCVIWYKSTAIASAKKVG 369          
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Match: A0A225UGS0_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGS0_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.390e-11
Identity = 45/172 (26.16%), Postives = 83/172 (48.26%), Query Frame = 0
Query:    3 VAETRVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYEICS-NLFVTVANGETLPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTVCLKKEGAAIALPNGNVLLCRKLG 173
            V     CF C + GH+K +CP ++     G  + +S   +    S++               W+ DSGATAHMTP  + +F+Y   S +++VT+A+G+ + + G G + +   D   I+   +  V ++P LD  L S+  +  + ++V  ++    I   +  V   +K+G
Sbjct:  202 VGSKGKCFNCGQAGHMKRDCPVKV----NGDSNDDSVFAIGEDRSAE---------------WLIDSGATAHMTPHRDDLFEYSAMSKDMYVTIADGKKIRVAGTGSVRLTGIDAKSIR---MVEVLYIPGLDRRLLSVGKLAERGMSVEFQRNSCVIWDKSKAVASGKKIG 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60878.13783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D8KT35_CULPI1.560e-1332.54Copia protein n=6 Tax=Culex pipiens TaxID=7175 Rep... [more]
H3H5K9_PHYRM1.680e-1230.68Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3I090_9STRA3.120e-1230.11CCHC-type domain-containing protein n=8 Tax=Phytop... [more]
A0A6G0QKW0_9STRA3.120e-1230.11CCHC-type domain-containing protein n=2 Tax=Phytop... [more]
A0A3M6VPY8_9STRA7.920e-1231.10CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A1W7R602_AEDAL9.340e-1231.79Putative copia-2 aa-i (Fragment) n=1 Tax=Aedes alb... [more]
A0A6A3GEB1_9STRA2.420e-1133.58CCHC-type domain-containing protein n=2 Tax=Phytop... [more]
A0A4Y2NNV2_ARAVE2.890e-1135.56CCHC-type domain-containing protein n=2 Tax=Araneu... [more]
A0A329SN38_9STRA4.910e-1128.74Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A225UGS0_9STRA5.390e-1126.16Integrase, catalytic core protein (Fragment) n=1 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 8..24
e-value: 0.002
score: 27.4
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 7..24
e-value: 2.1E-4
score: 21.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 9..24
score: 9.851
NoneNo IPR availableGENE3D4.10.60.10coord: 1..40
e-value: 9.7E-7
score: 30.5
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60878contigH-paniculata_contig60878:127..723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60878.13783.1mRNA_H-paniculata_contig60878.13783.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60878 127..723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60878.13783.1 ID=prot_H-paniculata_contig60878.13783.1|Name=mRNA_H-paniculata_contig60878.13783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
KNVAETRVCFQCNEPGHLKMNCPQRICPICKGIGHGESSHRLSAMFSSDG
FRDIVEHGFTAREFWVADSGATAHMTPSNELMFDYEICSNLFVTVANGET
LPIDGYGKMLVWMKDRGEIQKFSLSRVAHVPDLDTNLFSLQIVVNQRLTV
CLKKEGAAIALPNGNVLLCRKLG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf