mRNA_H-paniculata_contig6086.13776.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 2.740e-139 Identity = 223/435 (51.26%), Postives = 313/435 (71.95%), Query Frame = 1
Query: 904 DPGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAPFMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLFNTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNAFQRSR-SRRRQEGGLESLSP-----TSVYSPWLDEEDEERELDEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARMLTSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDFDGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDE-LQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVV 2187
DP + S+RSP ATLGLLMVFQMQF+S LRM+EANI+ PFM LD+LKW+NLHF+ + ++L+C +E++ ++WSN+DNG W NT VF LL+L++ H+L +S++EA WL+Q+NA R R + RQ E+ +P + Y+ +LD ++ +R+L EQ+ V+ ER+LKRH+S+W+YFPHVEL+FLL YQGASAAEARM+ SGC+PLV++G A+ +FPVL+ +YV+RIVW+R+RP P+ YE KGC++ K C G W +G S+FEWADKG W + +ED D D RKFRIGFEPLFVD+T++G +Y+ FLLF+W G++AG V NGT+QT + +YV+D +L L+PFSNS I + V+ADA+TL LM YA+ L+P D+ ++ VY +L+QTLAI+F IP+Y+D FI +
Sbjct: 506 DPSSVSTRSPGATLGLLMVFQMQFVSLLRMMEANITTPFMNFLDSLKWMNLHFEVDI-SFLSCDEEETRFNWSNDDNGTWALNTFLVFFLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAILRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQEQVSTERFLKRHHSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGICALIVFPVLMFIYVSRIVWSRVRPDNSPLRYEPN----PNAGKGCFLFKACGGFCKAWTSGSSMFEWADKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWLSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADAITLGLMFYATFLEPDDDDDADRLELVYAGALLVQTLAILFFVIPLYLDAFITI 935
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 4.920e-123 Identity = 215/457 (47.05%), Postives = 299/457 (65.43%), Query Frame = 1
Query: 940 TLGLLMVFQMQFLSTLRMLEANISAPFMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLFNTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNAFQRSR-SRRRQEGGLESLSP-----TSVYSPWLDEEDEERELDEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARMLTSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDFDGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDE-LQTIDYVYLCCMLIQ----------------------------------TLAIMFLTIPVYMDTFIVV 2187
TLGLLMVFQMQF+S LRMLEANI+ PFM LD+LKW+NLHF+ L +L+C E++ + WSN+DNG W NT VF+ LL+L++ H+L +S++EA WL+Q+NA R R + RQ E+ +P + Y+ +LD ++ +R+L EQ+ V+ ER+LKRH S+W+YFPHVEL+FLL YQGASAAEARM+ SGC+PLV++G A+ +FPVL+ +YV+RIVW+R+RP P+ YE KGC++ K C G W +G S+FEWA+KG W + +ED D D RKFRIGFEPLFVD+T++G +Y+ FLLF+W G++AG V NGT+QT + +YV+D +L L+PFSNS I + V+AD +TL LM YA+ L+P D+ ++ VY + +Q TLAI+F IP+Y+D FI +
Sbjct: 841 TLGLLMVFQMQFVSLLRMLEANITTPFMNFLDSLKWMNLHFEVDL-TFLSCDGEETRFDWSNDDNGTWALNTFLVFSLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAVLRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQERVSTERFLKRHQSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGVCALIVFPVLMFIYVSRIVWSRVRPDNSPLRYEPN----PNAGKGCFLFKACGGFCKAWTSGSSMFEWAEKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWMSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADTITLGLMFYATFLEPDDDDDADRLELVYAGALSVQAWFRVVCDFLDASPPARPPVLLVAGAVSLPTSAQTLAILFFVIPLYLDAFITI 1292
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 3.120e-116 Identity = 242/485 (49.90%), Postives = 304/485 (62.68%), Query Frame = 1
Query: 769 STIPDSAGVRSGTNPTXXXXXXXXXXXXXXXXXXXXQGMTEQAVVDPGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAPFMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLFNTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNAFQRSRSRRRQEGGLESLSPTSVYSPWLDEEDEERELDEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARMLTSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDFDGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTD-ELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKV 2220
+TI D+AGVR T XXXXXXXXXXXX + T+ DPGT SSRSPSATLGLLM+FQ+QFLS+LR+LEANI+APF ++LD LKWLNLHFD + C DEDS ++W+ +DNG+W FNT AVF + LL++ H+L LS++EA WL+Q+ G++ L P P L + S+ L H + L+ G + +L S LV FIFP+ L+ YV RIVW+R++P GPV + R K CW +CRG +GWR G S+FEWADKGAW E D + RKFRIGFEPLFVDFTK+GA+YI+FLLFKWF LGI+AGLV NGTVQT + V+Y+VD+ LL LRPFSNS + W+E VLV ADALTL +MV+AS LDP D + + +D +Y CMLIQTL I LTIP+Y DTFIV+ FQIR K+
Sbjct: 958 TTIVDNAGVRQATG-NANXXXXXXXXXXXXATSTAQETATDAVSTDPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANITAPFRRMLDQLKWLNLHFDVDFVGFAGCDDEDS-FTWTEDDNGMWAFNTFAVFGFMALLILCHILLLSYIEASWLSQAQL------------GVDILPPRGAGFPAL---------------------RLPGSVNLRGSHDQQ---RLLASGGAGGVCAVLPSVRHGLVRRMVRRKFIFPIFLMFYVGRIVWSRVKPQEGPVTFTKGLAPEEGR-KRCWCVSLCRGFRDGWRNGHSIFEWADKGAWVSLKDEKVDLESRKFRIGFEPLFVDFTKEGAVYIIFLLFKWFALGIIAGLVTNGTVQTASLAVIYLVDIALLCKLRPFSNSVVQWVETVLVTADALTLGMMVWASVLDPDMDADKRKLDGIYAGCMLIQTLGIFLLTIPIYADTFIVIFFQIRHKASKL 1403
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: A0A6H5JTC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC8_9PHAE) HSP 1 Score: 249 bits (636), Expect = 1.630e-70 Identity = 129/229 (56.33%), Postives = 162/229 (70.74%), Query Frame = 1
Query: 1558 LLYVTRIVWNRIRPHYGPVDYEHRWKDAS-------QRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDFDGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTD-ELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKV 2220
+ YV RIVW+R++P GPV ++ A K CW +C+G +GWR G SVFEWADKGAW E D D RKFRIGFEPLFVDFTK+GA+YI+FL+FKWF L ++AGLV NGTVQT + V+Y+VD+ LL MLRPFSNS + W+E +LV ADALTLALMV+AS LDP D + + +D +Y CML+QTL I+ LTIP+Y DTF+V+ QIRQ K+
Sbjct: 1 MFYVGRIVWSRVKPQEGPVTFDKGLAPAGGDGXXXXXGRKRCWCVLLCKGFRDGWRNGHSVFEWADKGAWVSLKDEKVDLDSRKFRIGFEPLFVDFTKEGAVYIIFLIFKWFALAVIAGLVTNGTVQTASLAVIYLVDVALLCMLRPFSNSVVQWVETLLVTADALTLALMVWASALDPDEDGDKRKLDNIYAGCMLVQTLGIILLTIPIYADTFVVLFSQIRQKASKL 229
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 161 bits (407), Expect = 4.110e-37 Identity = 100/285 (35.09%), Postives = 159/285 (55.79%), Query Frame = 1
Query: 1405 SMWLYFPHVELVFLLLVYQGASAAEARMLT-SGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPH----YGPVDYEHRWKDASQRPKG--CWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDF--DGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKVSANT 2232
S WL+FPHVELVFL Y+GA A++ L +GC P++I G A+ +P+L+ + V R + R+RP+ + P + + DA +G + GW S+F WA+KG W+ +++E +G+ FRIGFEPLFVDFTK GA ++ F L +W LG + L++ +Q ++ L+ + LL + RPF+NS I + LV DA+ +AL+ +++ T +D V ML+Q A+ L IP+Y+DT +++ IR ++K + T
Sbjct: 1032 SAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVV---MLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTT 1313
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 158 bits (399), Expect = 4.210e-37 Identity = 147/520 (28.27%), Postives = 251/520 (48.27%), Query Frame = 1
Query: 877 QGMTEQAVVDPGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAPFM--KLLDNLKWLNLHFDTGLGAWLACGDED----------SVYSWSNNDNGIWLF-NTLAVFACLLL-LVVFHVLFLSFMEAKWLAQSNAFQRSRSRRRQEGGLESLSPTSV----YSPWLDEEDEERELDEQQAVAAE-----------------------------------------RYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARMLTSGCWPLVIIGGFA-MFIFPVLLLLYVTRIVWNRIRPH----YGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDF--DGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKVS-ANTC 2235
QG+ A V P S R+PS T+ +L++ Q+QFL+TL ++++ + + +L NL+W+NL +G + G E + S +D G +F + +F LLL +VV H++ +S +EA WL++ A + +R+ + L +SP D E + DE A A+ RY R +S+WLYFPH+EL+FLL ++GA A++ + G P V A + ++PVL+++ R R+ P + PV E P+ ++ K+ G+ + S+F WA+ GAW+ + DE+ +G +FRIGFEPLFVDFTK+ + + V+ L + + A LV++ VQ + L+ + LL + RPF+NS I + L + DA ++A++ + T + +D +++Q +A++ L IP+Y+D V+ IR+ +R ++ +NTC
Sbjct: 31 QGVLGAASVQPHV-SVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSP-----DAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRY--RSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRS-FLSKVRTGL----KEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDT---AVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTC 534
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 159 bits (402), Expect = 1.960e-36 Identity = 133/488 (27.25%), Postives = 232/488 (47.54%), Query Frame = 1
Query: 904 DPGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAP--FMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLFNTLAVFACLLLLVVF-HVLFLSFMEAKWLAQSNAFQRSRSRRRQEGGLESL--------------------------------SPTSVYSPWLDEEDEER------ELDEQQAVAAERYLKRHN-SMWLYFPHVELVFLLLVYQGASAAEARML-TSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDF--DGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKVSANT 2232
+P S+R PSATL +++ Q+QFL+TL +++ + + L+W+NL + +G +A DE + + ++ + LA+ +LL + F HV +S +EA WL + A + + RR+ + L +P++++ D DEE + + ++ + H+ S WL+FPHVELVFL ++GA A+ A + S C + AM ++P+L+ + V R + R+RP+ + ++ +D + G + + W S+F WADKG W+ + D +G FRIGFEP+FVD+TK+G +IV L +W V ++ N VQ + L+ V F+L L+PF+NS I +E + DA+++ + ++ T+ ++ +++Q L++ L IPVY+D +V IR +RK T
Sbjct: 1183 NPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIA-SDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLI-FKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNT---SVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKT 1665
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 157 bits (398), Expect = 7.320e-36 Identity = 137/481 (28.48%), Postives = 219/481 (45.53%), Query Frame = 1
Query: 907 PGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAP--FMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLF--NTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNA--------------------FQRSRSRRRQEGGLESLSPTSVYSPWL--------DEEDEEREL----DEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARML-TSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDF--DGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKVSANT 2232
P S R PSATL +++ Q+QFL+ L +++ +S + L+W+NL + +G + + ++ ++ G +F N V LL + HV +S EA WL + A F+ R RR GL SP +P L DEE+ R L E Q + S WL+FPHVELVFL ++GA A+ A + S C + AM ++P+L+ V R ++ R+RP + + + C G + + W S+F WADKG W+ + + + +G FRIGFEP+FVD+TK+G +IV L +W + +V +++N VQ + L +L L+PF+NS I + +V DA++ L+ A+ T ++ ++Q +++ L IPVY+D +V IR +RK T
Sbjct: 1372 PSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIV--SDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSH-FKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNS---AVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKT 1846
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 155 bits (392), Expect = 4.030e-35 Identity = 139/483 (28.78%), Postives = 224/483 (46.38%), Query Frame = 1
Query: 907 PGTTSSRSPSATLGLLMVFQMQFLSTLRMLEANISAP--FMKLLDNLKWLNLHFDTGLGAWLACGDEDSVYSWSNNDNGIWLF--NTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNA--------------------FQRSRSRRRQEGGLESLSPTSVYSPWL--------DEEDEEREL----DEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARML-TSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPV--DYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDEDF--DGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLYVVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVSFQIRQNVRKVSANT 2232
P S R PSATL +++ Q+QFL+ L +++ +S + L+W+NL + +G +A + ++ ++ G +F N V LL + HV +S EA WL + A F+ R R+ GL SP + +P L DEE+ REL E + + S WL+FPHVELVFL ++GA A+ A + S C + AM ++P+L+ V R ++ R+RP + Y+ + + P G G + W S+F WADKG W+ + + + +G FRIGFEP+FVD+TK+G +IV L +W + +V +++N VQ + L +L L+PF+NS I + +V DA+ L+ A+ T ++ ++Q +++ L IPVY+D +V IR+ +RK T
Sbjct: 1413 PPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIA--SDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNT-PNG--RGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNS---AVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKT 1887
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Match: A0A836CFX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX2_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.270e-32 Identity = 116/433 (26.79%), Postives = 196/433 (45.27%), Query Frame = 1
Query: 916 TSSRSPSATLGLLMVFQMQFLSTLRMLEANISAPFMKLLDNLKWLNLHFDTGLGAWLACGDED---SVYSWSNNDN-GIWLFNTLAVFACLLLLVVFHVLFLSFMEAKWLAQSNAFQRSRSRRRQEGGLESLSPTSVYSPWLDEEDEERELDEQQAVAAERYLKRHNSMWLYFPHVELVFLLLVYQGASAAEARMLTSGCWPLVIIGGFAMFIFPVLLLLYVTRIVWNRIRPHYGPVDYEHRWKDASQRPKGCWIGKMCRGISNGWRTGDSVFEWADKGAWKCRTSEDED---FDGRKFRIGFEPLFVDFTKQGAIYIVFLLFKWFVLGIVAGLVNNGTVQTTVIFVLY-VVDMFLLFMLRPFSNSFILWLEFVLVVADALTLALMVYASTLDPSTDELQTIDYVYLCCMLIQTLAIMFLTIPVYMDTFIVVS 2190
T S +AT +MV Q+QFL+ L +A + F D+LKW NL + ++ G + +WS++D + + NT+ + LL L V +L+ ++++A+ L + G +S P+ E VA Y + W YFP +LV+LL YQGA A+A L SG +++ + ++P +L+Y T +V + H D ++ + G + + C+GI+ W G+S+ +W GAW T ++ D R+ RIGFEPLFVD+T+ G+ I + L + LG++AGL+ F+ + L+ LRP+ N + L+ +L D + + + M++ +A+ LT+P+YMDT +V S
Sbjct: 5 TPPHSGTATAAAMMVGQVQFLTLLGSTQAANGSSFASFADSLKWANLQIPMAFSSGVSGGGARRRLAQDAWSDDDAVRVLVGNTIMIAGGLLALCVAQLLYGAWLKARALGRL--------------GAQSCDPSGAVC-------------EDDLVA---YHSMSENAWFYFPRYQLVWLLFSYQGAVQAQAAALNSGRAGVIVFAAALLLLYPAAMLVYTTHLVSH----HLACADPSLMFEKSDSAQAGGLLKRACKGIATAWAKGESILDWGVNGAWHAATGDETHPSALDSRRLRIGFEPLFVDYTQMGSWLISWELLRMLFLGLIAGLLTAHAAPVAACFLAASAAHLLLVLALRPYGNVAMTALDALLAANDTASAXXXXXXXXXXXXXXXXXXLSGM----MILSLIALATLTVPIYMDTAVVTS 399 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6086.13776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6086.13776.1 >prot_H-paniculata_contig6086.13776.1 ID=prot_H-paniculata_contig6086.13776.1|Name=mRNA_H-paniculata_contig6086.13776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=749bp GAATGATGTGAATGATGTGAATGATGTGAATGATGTGAATGATGTGAATGback to top mRNA from alignment at H-paniculata_contig6086:70..6303+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6086.13776.1 ID=mRNA_H-paniculata_contig6086.13776.1|Name=mRNA_H-paniculata_contig6086.13776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6234bp|location=Sequence derived from alignment at H-paniculata_contig6086:70..6303+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6086:70..6303+ >mRNA_H-paniculata_contig6086.13776.1 ID=mRNA_H-paniculata_contig6086.13776.1|Name=mRNA_H-paniculata_contig6086.13776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4494bp|location=Sequence derived from alignment at H-paniculata_contig6086:70..6303+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |