mRNA_H-paniculata_contig6083.13773.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6083.13773.1
Unique NamemRNA_H-paniculata_contig6083.13773.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A6H5KWV7_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWV7_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 6.300e-110
Identity = 179/350 (51.14%), Postives = 235/350 (67.14%), Query Frame = 2
Query:   80 ELKLESTTSESEFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAW---GIGLEIDAEVHEGFDDGLNTVWLS-----KGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFG-YAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAIDVARKVLPGVKQKGQTHKGTLGAAKAAAVNASQE 1102
            E++L+     + F+ +N  +F+ MSK+ Y P+   E A+ G D   G+G+  FHWFE D   + A+ +D+I DTE +VAAND+VI V FRG+ E  DW TN NL+ R VP+ W   G+G     +VH+GFDD + TVW        GM  +I  L  EEGK+RKLYL GHSLGGALAT+AAA L F++++ +SGI +IGSPRVF   MA  FN K+N G  MKDKYFRCRNNND+VTR P   Y HVGTEIYFDRFG LST++ LDR LGR +AL+  +++ G +DH + EY+RL KQ VI  RVPLLDK K +A+D  +KV P  ++  +T K  +  AK A + AS+E
Sbjct:   56 EVELKPDVKATSFSAQNGFFFSKMSKLVYSPRIEVESAMQGKD---GLGYEHFHWFEADPAVSGASIWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWLLDGLG----CDVHQGFDDAVETVWNPGSAHPSGMRNIIKTLCKEEGKHRKLYLAGHSLGGALATVAAARLAFMDDVKISGIYTIGSPRVFGENMADRFNAKMNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGANDHGAGEYIRLFKQTVIDERVPLLDKAKSLAVDAVQKVAPVDEKAAKTQKDEIETAKKAVLKASKE 398          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: D8LDK8_ECTSI (Putative lipase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK8_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 1.150e-101
Identity = 157/301 (52.16%), Postives = 217/301 (72.09%), Query Frame = 2
Query:  110 SEFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKG-MLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPF--GYAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAID 1003
            ++F+ +NA YFA++ KIAY P+  A+  + GN T+ G+GF +FHWF+ D E AK + FD I DTE +VAAND+++ V FRGTKE  DWATN+++  R     W     + A VHEGF++G+++VW  +G M  VI  LY+E+GK+RKLY+ GHSLGGALAT+AAA L +++N+ ++G+ +IGSPR+FD   A  F+ ++N G  +K+KYFRCRNNNDIVTR+P    Y HVGTEIY DRFG +ST+SF DR LGR++AL  G ++ G+ DHS++EY+R  KQ VI+ +VP  DK K    D
Sbjct:    8 TKFSTQNAFYFASLCKIAYKPEQEAKGLVKGNSTNDGLGFDRFHWFDAD-EAAKRSSFDAIQDTEAFVAANDDMVAVVFRGTKELTDWATNLDISPRDCAEQWEAPDAVGA-VHEGFNEGVDSVWEVRGNMRKVIKNLYNEKGKDRKLYIAGHSLGGALATVAAARLSYIDNLDIAGVYTIGSPRLFDPSAAAGFDSRMNDGTPLKEKYFRCRNNNDIVTRIPLPPSYEHVGTEIYLDRFGAISTSSFADRILGRLSALCRGELIDGVDDHSTSEYIRHFKQDVINAKVPAFDKAKSTCCD 306          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A6H5L4H8_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4H8_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 5.730e-101
Identity = 175/369 (47.43%), Postives = 245/369 (66.40%), Query Frame = 2
Query:   23 DDVHTLPPSTATDSKLAKIELKLESTTSESEFTVENALYFATMSKIAYLPKAAAEDALV-----GNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLS-----KGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFG-YAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAIDVARKVLPGVKQKGQTHKGTLGAAKAAAVNAS 1096
            +DV  +P  +A D++  ++E KL++    + F+ +NA + A MS + Y  K     AL      G   + G     F WFE + E    + FD IHDTE +VAAND  I VAFRG+    DW TN +++ R +P  W +    D ++H GFDDG+NTVW       +GML VI + YHEEG++RKLY+TGHSLGGALATIAAA LVFV++++V+ + +IGSPRVFDS +A IF+ K N+G  MKDKYFRCRNNNDIV+ +P   Y HVGTE+YFDRFG +ST + LDR LGR +AL+  + + G++DHS +EY+RL +QAV+ +R+ LL KT+ + +D  +KV+P  +++ +     + AAK AA+ AS
Sbjct:    9 EDVPIVPVYSAGDAE-EEVEFKLDN--DATAFSEQNAYFLARMSDLCYQSKDEVRSALETLSFWGKGAAAG---DNFQWFEANDEVVDRSSFDPIHDTEAFVAANDGAIVVAFRGSSGGRDWLTNFSILPRDIPKDWKLETT-DGDLHRGFDDGVNTVWNPGPGHPEGMLAVIKRFYHEEGRSRKLYITGHSLGGALATIAAARLVFVDDLNVAALYTIGSPRVFDSEVAAIFDSKTNHGTRMKDKYFRCRNNNDIVSCIPPSPYKHVGTEVYFDRFGAMSTHNLLDRLLGRWSALLRFSFIDGVNDHSRSEYIRLFEQAVVSSRLSLLVKTRSVVVDAVQKVIPVNQKEVKVMHEKVEAAKQAALEAS 370          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A6H5JMK4_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMK4_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 1.690e-82
Identity = 149/334 (44.61%), Postives = 208/334 (62.28%), Query Frame = 2
Query:   23 DDVHTLPPSTATDSKLAKIELKLESTTSESEFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSK------GMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFG-YAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAID 1003
            D  + +PP T   S+  ++ +K +   S   F+  NA +FA +SKIAY  +  A   LVGN T  G+GF +FHWFE   E A+   F  +HDT+ +VAA+D++I V FRGT    DW TN  +  ++ P  W +       VH GFDD + TVWLS       GM   I  LY+E+GKNRKL+  GHSLGGALAT AAA + F++++ ++GI +IGSPR+F+    + F+ + N G  +K+KYFRCRNN D V  VP   Y HVGTEIY D+ GT+S  S  DR L ++   +    ++GI DHS++EY+RL KQ V+++RVPL+DK   + +D
Sbjct:   73 DPTNAMPPHTWKISRSPEVNMKPD--LSAKGFSALNAFFFAGLSKIAYASEDEARGLLVGNATERGLGFDRFHWFE-GGEEARKNPFGNLHDTDAFVAASDDIIAVVFRGTMGIADWYTNAKVQPKKCPQEWRVPPP-GGTVHTGFDDAVGTVWLSTPSGQPTGMYQAIMDLYNEKGKNRKLFFAGHSLGGALATNAAARVAFIDDLDIAGIYTIGSPRLFNRVAGRHFDGRPNGGKTLKEKYFRCRNNKDPVPTVPKRPYVHVGTEIYIDKCGTISMASMADRILDQLLWWLRFEYIRGIDDHSTSEYIRLFKQIVLNSRVPLMDKAISVVMD 402          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: D8LDL1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL1_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 5.790e-56
Identity = 117/287 (40.77%), Postives = 158/287 (55.05%), Query Frame = 2
Query:  248 EVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWL---SKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFGYAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAIDVARKVLPGVKQKGQTHKGTLGAAKAAAVNASQ 1099
            E D   +  +  D IHDTE +V AND++I V FRGT+E  DW TN+N+  R     W I LE   ++H GFDDG++TVWL     GM   I  LY+E GK+RKLY+ GHSLGGALATIAAA L FV++M+++GI +IGSPR                                                     G +ST++  DR LGR++AL  G ++ GI+DH ++EY RL KQAVI +R+ LLDKTK +  D  +KV+P   ++ +     +  AK AA  AS+
Sbjct:   59 EADPAVSGRSILDAIHDTEAFVTANDDMIVVVFRGTQELTDWTTNLNMGLRSARNEWKIDLE-GCDLHRGFDDGVDTVWLPSSKNGMYQTIKNLYNEHGKSRKLYIAGHSLGGALATIAAARLSFVDDMNIAGIYTIGSPR-----------------------------------------------------GAISTSNVWDRLLGRMSALFRGELIDGINDHGTSEYARLFKQAVIASRLSLLDKTKSVVKDAVQKVIPVNMERKKAQLQEIRQAKEAAFKASK 291          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: K9PYD0_9CYAN (Lipase class 3 n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9PYD0_9CYAN)

HSP 1 Score: 140 bits (353), Expect = 1.270e-33
Identity = 104/286 (36.36%), Postives = 147/286 (51.40%), Query Frame = 2
Query:  128 NALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAI-DWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHL-VFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVP---FGYAHVGTEIYFDRFGTLST-------TSFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQA 949
            N LY A  +K+ Y  KA  E  L    T  G   T  ++F    E           DT+ +VA +   I VAFRG++  I DWATN   I R     W    + D +VH GF   L+++W       +  ++ +    ++ L++TGHSLGGALAT+AAA L +    + V+G+ + G PR+ ++  AK+FN K+      K+  FRC NNND+VTRVP   F Y+H+G  +YFD  G L         + F DR  GR + +   +   GI DHS  EY RL  +A
Sbjct:   16 NMLYLANCAKLVYQSKAKIESEL----TKLGFDLTDKNFFLSSTET----------DTQCFVAGDRRKIIVAFRGSERKIADWATNAKAIQRH----WTDDQD-DGKVHRGFYRALDSLWDE-----LEKEIRNLRTDSQTLWITGHSLGGALATLAAARLHIDSPKIAVNGLYTFGQPRIGNNRFAKVFNSKL------KNISFRCVNNNDVVTRVPPQIFNYSHIGKLMYFDAKGKLRNDRNLSWWSRFWDRVEGRYDDIFDLDT-DGIGDHSMAEYERLAIKA 270          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A1X7AEQ2_9GAMM (Lipase (Class 3) n=1 Tax=Parendozoicomonas haliclonae TaxID=1960125 RepID=A0A1X7AEQ2_9GAMM)

HSP 1 Score: 136 bits (343), Expect = 2.430e-32
Identity = 95/288 (32.99%), Postives = 142/288 (49.31%), Query Frame = 2
Query:  110 SEFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAI-DWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVE-NMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVP---FGYAHVGTEIYFDRFGTLSTTS-------FLDRFLGRVNALVHGNVLKGISDHSSNEYLRL 937
            S F  +N  Y +  + +AY  ++    AL   D  T                +  ++F K  DTE  VA + + I VAFRGT+  + +W  N  +          +G+     VH GF +  N+VW       V++++      N+ ++LTGHSLGGALATIAAA L   + ++ V+G+ + G PR  +   AK      NY   +K++ FRC NNND++TR+P   FGY+H+GT +YFD  GT+ T         F DR  GR +  +      G+ DH  + Y  L
Sbjct:    9 SNFKKKNLAYLSRFANLAYEDESTVRTALDNLDLDT----------------SNNSFFFKEGDTEAVVAGDRKKIIVAFRGTEATLGEWMNNAQIAKDTWTEDNPLGM-----VHSGFYEAFNSVWNQ-----VLAEIQRLRTHNQTIWLTGHSLGGALATIAAATLELQQPDIRVNGVYTFGQPRTANHLFAK------NYNNRLKERTFRCVNNNDVITRIPPQIFGYSHIGTLMYFDTDGTIHTDGKLSWWARFWDRLEGRYDD-IWNLAPDGVEDHRMDNYQAL 263          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: UPI0016886C83 (Lipase family protein n=2 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016886C83)

HSP 1 Score: 137 bits (345), Expect = 4.550e-32
Identity = 103/286 (36.01%), Postives = 148/286 (51.75%), Query Frame = 2
Query:  113 EFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGM-GFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVP---FGYAHVGTEIYFDRFGTL-STTSFLDRFLGRVNALVHGNVLK----GISDHSSNEYLRLLK 943
            +++  NA   A  +++AY    A        D  T + GFT+        ER +   F +  DT+ +VAAND+++ ++FRGT +  DWATNI +  +       IG     +VHEGF + L+ VW       V++ L   + KN+ L++TGHSLGGALAT+A A L F     V+G+ + GSPR  D   A  FN         K + FR  +NND+VTRVP   FGY+HVGT +Y D  G +     F + FL  V   +  + LK    G  DH   +Y + L+
Sbjct:   52 DYSPINAFCLAKAAQLAYSDSPAI-------DAQTKLWGFTK--------ERVR---FCEDQDTQAFVAANDQIVVLSFRGTTDRNDWATNIGVAFKEETK---IG-----KVHEGFLEALDCVWPR-----VMTTLDAFQDKNQSLWITGHSLGGALATLATARLRFGLKRPVAGLYTFGSPRAVDEAFADTFNHDF------KAQTFRLVHNNDVVTRVPPRSFGYSHVGTFLYIDPKGRIHQDIRFWNNFLANVQGRM-SDFLKPGTDGFKDHDIAKYAKHLE 299          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A1V4AQB0_9BACT (Lipase_3 domain-containing protein n=1 Tax=Candidatus Brocadia caroliniensis TaxID=1004156 RepID=A0A1V4AQB0_9BACT)

HSP 1 Score: 135 bits (339), Expect = 7.050e-32
Identity = 93/286 (32.52%), Postives = 139/286 (48.60%), Query Frame = 2
Query:  116 FTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFG---YAHVGTEIYFDRFGTLSTTS-----FLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQA 949
            +++ENA + +  S++AY  ++     +         GF  F ++E            K  DT+ ++A N E++ +AFRGT    DW T+IN+     P         D +VHEGF   +++VW        I      E K R L++TGHSLG ALAT+A A L   ++  V+G+ + G PR  D    K      N+      + FR   NNDIV R+PF    Y+HVGT  Y D+ GT+S          DR  GR+  L+      GI DH+ + Y++ L++A
Sbjct:   13 YSLENAYWLSRASQLAYENESKISQGI------QAWGFNDFKYYE-----------HKKLDTQAFIAGNQEMLMLAFRGTASLKDWMTDINIDLINGP---------DGKVHEGFSMAISSVWRD------IWSFIRNERKGRALWITGHSLGAALATLAVAKLRLEKDEPVNGLYTFGQPRTGDREFQK------NFDADFVSQTFRFVYNNDIVARIPFRSMHYSHVGTFKYIDKKGTISEDISWWDIIADRVHGRIEDLLKPGT-DGIKDHAIDNYVKFLEKA 259          
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Match: A0A1G2Y2E3_9BACT (Lipase_3 domain-containing protein n=1 Tax=Planctomycetes bacterium GWF2_39_10 TaxID=1801955 RepID=A0A1G2Y2E3_9BACT)

HSP 1 Score: 132 bits (331), Expect = 8.190e-31
Identity = 96/287 (33.45%), Postives = 139/287 (48.43%), Query Frame = 2
Query:  113 EFTVENALYFATMSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHDTEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEVHEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAAAHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRNNNDIVTRVPFG---YAHVGTEIYFDRFGTLSTT-----SFLDRFLGRVNALVHGNVLKGISDHSSNEYLRLLKQA 949
            +++ +NA +    S+IAY P   A+     +DT +  G  +F +F                DT+G++A N EV+ +AFRGT+   DW T++++     P           +VH+GF + L  VW        I +    + + R L++TGHSLG ALAT+A A L   ++  V+G+ + G PR  D   AK      N+ +    + FR  NNNDIVTRVPF    Y+HVGT  YFD  G            +DR  GRV  L+      GI DH    Y+  L +A
Sbjct:   12 DYSKKNAYWLGKASQIAYKPSREAK-----SDTGS-WGLNEFEYFNH-------------RDTQGFLAGNKEVLLLAFRGTENLRDWMTDLDMDLVGGPGG---------KVHDGFLNALGYVWRD------IWQFIRTQRQRRSLWVTGHSLGAALATLAVAKLRLEKDEAVNGLYTFGQPRTGDREFAK------NFDIDFAAQTFRYVNNNDIVTRVPFRSMHYSHVGTYKYFDENGNQRDDISWWDKLVDRVKGRVEDLLEPGT-DGIKDHGIANYVTFLGKA 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6083.13773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWV7_9PHAE6.300e-11051.14Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
D8LDK8_ECTSI1.150e-10152.16Putative lipase n=2 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5L4H8_9PHAE5.730e-10147.43Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JMK4_9PHAE1.690e-8244.61Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
D8LDL1_ECTSI5.790e-5640.77Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
K9PYD0_9CYAN1.270e-3336.36Lipase class 3 n=1 Tax=Leptolyngbya sp. PCC 7376 T... [more]
A0A1X7AEQ2_9GAMM2.430e-3232.99Lipase (Class 3) n=1 Tax=Parendozoicomonas haliclo... [more]
UPI0016886C834.550e-3236.01Lipase family protein n=2 Tax=Leptolyngbya sp. FAC... [more]
A0A1V4AQB0_9BACT7.050e-3232.52Lipase_3 domain-containing protein n=1 Tax=Candida... [more]
A0A1G2Y2E3_9BACT8.190e-3133.45Lipase_3 domain-containing protein n=1 Tax=Plancto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6083contigH-paniculata_contig6083:687..11170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2.8e-94
Seed eggNOG ortholog2880.D8LDK4
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005615,GO:0044421
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2234
Cds size960
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930679.9333289-UTR-H-paniculata_contig6083:686..18121622930679.9333289-UTR-H-paniculata_contig6083:686..1812Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 687..1812 -
1691481403.1396465-UTR-H-paniculata_contig6083:686..18121691481403.1396465-UTR-H-paniculata_contig6083:686..1812Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 687..1812 -
1622930680.0877297-UTR-H-paniculata_contig6083:5843..59151622930680.0877297-UTR-H-paniculata_contig6083:5843..5915Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 5844..5915 -
1691481403.2482877-UTR-H-paniculata_contig6083:5843..59151691481403.2482877-UTR-H-paniculata_contig6083:5843..5915Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 5844..5915 -
1622930680.1062572-UTR-H-paniculata_contig6083:11094..111701622930680.1062572-UTR-H-paniculata_contig6083:11094..11170Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 11095..11170 -
1691481403.2689474-UTR-H-paniculata_contig6083:11094..111701691481403.2689474-UTR-H-paniculata_contig6083:11094..11170Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6083 11095..11170 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930679.967779-CDS-H-paniculata_contig6083:1812..19051622930679.967779-CDS-H-paniculata_contig6083:1812..1905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 1813..1905 -
1691481403.1546304-CDS-H-paniculata_contig6083:1812..19051691481403.1546304-CDS-H-paniculata_contig6083:1812..1905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 1813..1905 -
1622930679.9828923-CDS-H-paniculata_contig6083:2369..25651622930679.9828923-CDS-H-paniculata_contig6083:2369..2565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 2370..2565 -
1691481403.1680553-CDS-H-paniculata_contig6083:2369..25651691481403.1680553-CDS-H-paniculata_contig6083:2369..2565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 2370..2565 -
1622930680.0008657-CDS-H-paniculata_contig6083:3581..37401622930680.0008657-CDS-H-paniculata_contig6083:3581..3740Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 3582..3740 -
1691481403.1919844-CDS-H-paniculata_contig6083:3581..37401691481403.1919844-CDS-H-paniculata_contig6083:3581..3740Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 3582..3740 -
1622930680.0157435-CDS-H-paniculata_contig6083:4324..45301622930680.0157435-CDS-H-paniculata_contig6083:4324..4530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 4325..4530 -
1691481403.2048094-CDS-H-paniculata_contig6083:4324..45301691481403.2048094-CDS-H-paniculata_contig6083:4324..4530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 4325..4530 -
1622930680.0315187-CDS-H-paniculata_contig6083:5240..54441622930680.0315187-CDS-H-paniculata_contig6083:5240..5444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 5241..5444 -
1691481403.2187529-CDS-H-paniculata_contig6083:5240..54441691481403.2187529-CDS-H-paniculata_contig6083:5240..5444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 5241..5444 -
1622930680.0661187-CDS-H-paniculata_contig6083:5741..58431622930680.0661187-CDS-H-paniculata_contig6083:5741..5843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 5742..5843 -
1691481403.2323394-CDS-H-paniculata_contig6083:5741..58431691481403.2323394-CDS-H-paniculata_contig6083:5741..5843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6083 5742..5843 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6083.13773.1prot_H-paniculata_contig6083.13773.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6083 1813..5843 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6083.13773.1

>prot_H-paniculata_contig6083.13773.1 ID=prot_H-paniculata_contig6083.13773.1|Name=mRNA_H-paniculata_contig6083.13773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
MSKIAYLPKAAAEDALVGNDTSTGMGFTQFHWFEVDAERAKAAYFDKIHD
TEGYVAANDEVIFVAFRGTKEAIDWATNINLISRRVPAAWGIGLEIDAEV
HEGFDDGLNTVWLSKGMLGVISKLYHEEGKNRKLYLTGHSLGGALATIAA
AHLVFVENMHVSGILSIGSPRVFDSGMAKIFNEKINYGVAMKDKYFRCRN
NNDIVTRVPFGYAHVGTEIYFDRFGTLSTTSFLDRFLGRVNALVHGNVLK
GISDHSSNEYLRLLKQAVIHNRVPLLDKTKGIAIDVARKVLPGVKQKGQT
HKGTLGAAKAAAVNASQEL*
back to top

mRNA from alignment at H-paniculata_contig6083:687..11170-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6083.13773.1 ID=mRNA_H-paniculata_contig6083.13773.1|Name=mRNA_H-paniculata_contig6083.13773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10484bp|location=Sequence derived from alignment at H-paniculata_contig6083:687..11170- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCAGGCAGAATCCATCGTGGACGATGTGCATACGTTGCCCCCCTCCA CTGCAACAGACTCGAAATTGGCAAAGGTGAGGCACTTGAGGCAAGTAGTG CACACATTACCCCCTTTTACTGTTATACACTACCTTCACTACCTCTCGGC GATGTGTACGTTGATTAGGATATGACGTGGTAAAGACGTCAATAGTCAAT TCGTTTCAGGATGAGGATCAATTCGTTAATATGTAAATACTGAGCCGATA ATGTGCCATGCATAAGTGAGACATTTGATTCTGATTCTGCCGCTTTTCAG AAACAACGTTTTCCCGAGGCTGCAGAGATAGTGACTCCTCTACTTCTATT TTGCCGTTGCTGTGTACGTCGTGGCGCCGGCTTTTGAGCATTAGTCGTAA ACTTGAAAATCATGTGAAAATTGAGTCCGAAACAGGGCAATGCTTCGTTT GAACCTGGTGTCAAGTTGGTACATATATCGCATGGTGGACGTGTGCACAA TTAACCCAACACCCTCATTTAAGCGAAGAAAAGGAGACGTTGAACGTGTT ACATATCTCGGACTATACGTGCTATGAAACGCCACGCTACCCCAACTAAC GCTCACGATAAATGTCAACCTCCGGTTTGCTCGTGATATCTGTATACTCA ACGTTTTTGTTCTATGAAGATGATGATTTTATCTTGAGTCTTTCATTATA CAGGCCCGGATATGGGGAGTGGGAAACATGAATGTCAACTAGAAATGTCA ATAACTCGCGCCGTAACCTCAAACCTTAACAAGCCTCAGCAAACGCACAA GATTCGCTATGCGACCCAGCGATCAAAATTCCTCCGATAACGTACCCTCA CATAATCCTTCGAGTACATGCATGCTTCTGTCTATGTCAGGTGAGCACCG ACAATTGCTCAACACGAAACATAATTAAGTAGTTTGAAAATACACTGTAT CGTTACATCGGAGAGATGGTGCTATTATATAATTCATAGTCTCCTGAAGC CTATCGATGTCTGGACTGACAAAGAGGATTTTACACGACTACTTTGTTAC AGATCCCGTTTAAGGAAGTAGATGTAAGTGGCAGAGCGGAGGAGCTTCTC CCCTCAAAACCAAGGCTGCAGCTGCAGCCAACAACTCAGACAGTCATAAT CCAGAATCCGAACCAGATAATGACCAACATATAACCAGGTCTTCTACAGT CAACGACAGATTCAGTACAATGAAACACGGCCAATATCCGTATAGCACTC TTCGCGGTTCAATAAAAACGTACGATTGTTGGGCTATTCTCCGTACCCGA ATCTAAGGATCAAAATGGGAAAACTACCCCATAATATTGGACAGCCTTCC TAGTTATCCGCATCTGAGACACACAGGCTAGAGACGGCATAAATATCGAA ATATCAAACCAATCATCCTGGTAACGAGAAGAAATATTCGTGTTCCCGAG AAAAGCCTCAATAGAGAAACGGTACAGCGTGGGGCGTTCTAGACATCGAA CGGAGCAGAAGCAAACCAGATGAGCGACCTACAACAAATATGTTATACTA CAGCGTAGGCAGCCAGCTGACCTATTTCGACTGCTCAACTAATTACGACC ACGATGAATCCAGCGCGAAAATGTCAATCCAACAAATTCTTTAAAAACGT GCGCTGTGTCTTGAAATTGGGACTTTTAAGGATTCGAAAAAGCACCGCTT CGCACGCATCCTTTCCTTCTTGTTAGAAGTAAGCAAGATGCTCGCTCAGC AAGAGAAAAGGTTAAGAAACCGTATTGGGTAACTAGAACAATTGGGTTGC GATAGACAATTTGTACCCATGACATTTTAGAACGTTGTCATGAGAAGGAC AGACCTAGAACTAGTATCGCAAGGACAGACCTTGAACTGACTTCCGTCTG CTTGGTATCCTACTCACGCTTACAGACCTCTTATATAGGACCTCCCGAAA CGTAGAACACTAGCAAATCATGACCGCTCGGGGGAAAGGACAACATGGCC GAGTGCTACCCCAACAAGTGAAATATCTTCGGTCGGGAAAACGCCTCTCC AAGCAATACTCATTCGGAAAGTACCAAAAATGCCTCCCCAAACAAGCATA TTTACTCGGAAGGCAAATAAGTAGGAATGGAAAAAACTCCGCCGAACAAG CAATATTTACACGGGAAAATAGAGCATGGAAAGGGGCCCCCCAAGAAAGC AAGACTGGCTCAAGAAACGAAAGCATGATATCAGCTGAAGCATTCGTAAG TTCAAATTTAAAGCTCAGAAAACTTGATGCTGCACTCTCCTATTGTCAAC CTTTTCAAGTCTCGTGTCAACCAAAGTCAACAGTTACCAACCCACACATA TTTGAATCAAAATCATGATCTGAATGTAAGTAAATCGAAGTCAACCTTGG GGGCCACTCCACATACTGAGGATCAATTAAAAAAATATGGCCATTTTACC GTAATAAACACGATGGAAACTCACTCAAAATTCAATGTGAAGAACAGAAA ATAGAGCGAATGAAAAACCAAGAAAAATCCCTCACGTATATCCACATTTC TATGAAATTTTACATAGTTTCCAAAGGCATTTATCTAATTTCCTTTCTAT ATGTCATCCCCTAGGTGATCGCTAACGCCTGCGTAGGTTATTAACGAAAA CCCCACACAAACCTGAACGACATCACGTCATAAAGGTCGCCAGTGTTCAA CCTATTTCATGGCTCGAACTTGGCTGCATAACTCCCTCCCTGATCCCAAA TTTTGGTAGAGAAACGCGAAGGCAGTACCGATTTGACGAACACTCATGCT CAGGCCCGAAAATTGCTCAAGCACAATCAAAAACAATTCCACTTACGAGT TCTTAATACTCGAGCCATTACAAGAACAGTCGAATACAATCGACGATAAT TCTTTTCGAATGTTGCGACAAGTCTGAACAACAAATGTTGAGACAAGCCA AGTTTCGTTAGTCGAGGGAAAGGCAACTAAGCCATATCCCTCTCTTCTTT TTACATCTGTAGAAGGATTAACAAGGTATCGCCGGCTTTATAGTGGCCAG CAGACCTTGGCAACGGCACATGCAGGGTCTCGTCACCGGTCATCGATCAC CATCATCCCACCAGCATCGTATATACCCCCGATCAGGGCTGCTCCTTGAG GCAAGCGAATAGTTGGGGGTCGAAACCTCGGCAAAAGCAAAGGCTTGATG GGGAACTCGCGGAAAGGCGTGAATGACAATAGCAGTAACGGATCAGTCTT GATTCACACCAAAATTCATGATGCTACCTCAATTGACAAAACGTTTGCCT ATACTGCAGCTATACGTTCAACCCTCTACCAAAATCCTTCACGCTTACCA AAGGTTATGTAAACCGTTTCAATGCTTATCGTGATATTTTCCAAACAACC AGCGCACACGTAAGACGTTATTTCTTCATGAATCATCACCGAGAAAACAC AATGCGATTACTGTAAGGCCGTATTAGCGCTAACCTAAACGTGCATCTGT TGTACCAGATGCTCAACGTGAAATGATATTCGCCGTGCAGATAGCGCTTC AAACACATACATCCACACATGACAATGATTTCGCTCACCACCTCATGTTA CGCAGAGAGATCTATGTAACCCTGATTAGAATCCAGTTACAGTCTACACC ATAAAAGCTGTTACTTTAGTTTCACAGGTATCAATTTTACGTTATGAATA ATGAATCACTTGTAAGCACGTCGACACCAACACATCAAAAACACGCGAGG AAAAAAAACAATCATAAAAATGAATCAATTTCGGAACATAAATGTCTTGC AGTATTTCGGGAAAACACTACTGACGGCACTGTATTATTTCCCCTTTGAT AACCATATTATGTAAATCATCATGGAAAGCATAAGATGCAAAAGAAAAAG CAATATGCGTTAGCATCAGTGACGAACAAGAAACGTACCAACTTATGCGT AATCTAATCCAAAATCATATATCTGGAAAACGTTCAGCACTACTTGAGAT CAGAGAAAGATTTCGATTCACTTCGGAGATCTGTTAGAACACCGTTCAAT CAGCAGTAACCAAGCGGTTCTACACTGCATACTATACATAAACACACACG ATGTTGCGAGTGAATTTAGAACTAGGTTTTGAACCTGAAATTGTGTAGCC CTATGTTTCACATGGAGCAGCAATTAGAAATTGCTCTTGAGCTGTAAGAA CCAAACAACTGTCCATCAGCAGAGAATATTATTTATGTCGGGACAAGAAC TAAAAGAAGTGAGACAGAACAACTTAAACAACTACGGACATGATACCCAT GCCATTTCGGAATAGAAATGGGGAAAACATATTCATTACTCAATTGCACA CGCAGCAGCTATAGTAGTGTCATTGCAGAAACAAGCCTACCGCTTGGCGT AACCCAAAGCGTCCTACGAAACAGCCAGGTCATAATGCGAAAACGCGATG CAATCGTTACAAGCAAGCCGTGGGCACTCCTCGCTCTTCAGCAGGCGCGA CTTCGTAGGCAGGCATGAACCTGCCCGTCTTGTAAAGCCGGTCTTCTCAC CTGGCTGCACCTACAGTCGGAGCATGAAAGCTCCTACCGGACCCCATCCT GCTCCTGTCGTCCAACTCTACTGACTCGAAAAGCAATCTAACTTTCCCCC TGCTCATTTTGTTGAATGCGTCTCGGTTGTTCGTTGGCGAGTCTTTAACC TCCGGTATCATTGCCGTTGCCGTCCTCTGATATCTGGATGAAACTACCAG CAGCTAAAACTAGTGTATTAGATCATTCATAGATTCCTGAAGCCTATCGA TCTCTGGACCGACAAAGAGGATTTTGCATGACTTCTTTGTTACAGGGAAG TAGATGTAAGTGGCAGAGTGGAGGAGCTTCTCCCCTCAAAACCAAGGCTG CGGCTGCAGCCAACATCTCAGACAGTCATAATCCAGAATCCGATCCAGAT AATGACCAATACAAGACCAGATCGTCTACAGTCAACGGCAGATTCAGTAC AATGAAACACGGCCAATATCCGTATAGCGCTCTTCGCGGTCCAATAACAA GCTAAGATAGTTGGGCTATTCTCCGTACCCGAATCTAAGAATCCAGAGAG GAAAACTACCCCATAATATCGGATAAGTACTTGCAGGTTATCCTGCAACT TTGATGTCATCAGACGAAATCAATATTGCATCTATTTATATTAATTCACA ATTTTTTAGCAGTATTCCTACTGTTATGGTAATATCTGGGTTGTGTGCCC TGCAGATCGAGCTCAAGCTGGAGTCGACTACGTCGGAGTCGGAATTCACC GTCGAAAATGCTTTGTACTTCGCCACGATGAGCAAGATCGCCTACTTGCC CAAGGCCGCTGCGGAGGACGCACTGGTTGGAAACGACACGTCCACGGGCA TGGGTTTCACCCAATTCCACTGGTTTGAGGTTTGTGAAATCACTAAATTG CTGACAAACTCAAAGTGGGTAGCCTGATTGTAGGCTTCTAGCGGGGCATT AACTCATGTGAAAATCACCGCCTTAAATCCTGACCTGCCTTATTAGGTTT TTTACAACCGTCGTATTCTAGTGGGTTCTAACCTCGGTTGGCCTGCCATA CATATACTTTCGCCTTCAAAGTGGCCATGACTGGGGGTAACCGTTGTAAC CGCAGTACTGGAATGTAGCCCGTGAGTGATTCATTGTTTTCTTTGATGCC TTCGTATCCGCTCGATTCTATTGAAGGTCGATGCAGAGCGCGCGAAAGCT GCCTACTTCGACAAGATTCATGACACGGAGGGTTATGTAGCCGCCAATGA TGAAGTCATCTTCGTGGCTTTCAGGGGCACCAAGGAGGCCATTGATTGGG CTACGAACATCAACCTCATATCAAGGAGAGTCCCTGCGGCGTGGGGTATC GGTCTGGAAATAGACGCCGAGGTGCACGAGGTAACTATACTCATGACCGA ATTTCAGCCCGGTCTTTCCCCTGTTCGTATGTGACCAACCAGATATCCGC ATATTACACAGACGAGCGAACCGCATGGTCGCGGCATGCGAGGATGCGTG AGAACGCGGTTGAGACAAGGTGGTACAGAGGTAGCTTCTTCCAGAGTAAC TATTAGTCATCGACTTACTCTTGATATCTAACACCAAACGCCTTCTTACA ATATTCGTGACAACATTAAGATACATTGCGCGAATTTCGTGGCCGTCGTT CATGTTTAGATGAACAGTACTACCGTCCCGGCTATTTTGATGTAAAAGTG TGCTTCGTTCTGAAGACCAAAGTGCTGTGCTGTTTCAGTGTGCCCTGTTA GTCGCCATGGCATGGGTAACATCATGTGGTATATCACAATTGCGGACAAT TACCGCTTCACGCATGCGCTGGCTTCCGTTTCCCCAAATGGTCAACAGTT AGCTTCCAGAAGCGCAGGACAGTAGTAGCATATTGAGGCAACGCCGGCAT GCTGTGGCGACAGTAGCGGTTGCATCTTACGCAGAGGAACATATATGACC CCGAATAGCGCAACGTTTCCTATCTCAGGAGAATATACTGCTGGTTGCAT TTACATCAACAACTGTTGCGTCGTTTTACAACATTTGCGAAACAAACTCT GCCTTCCGATGCTGTCCTTGCTGTCACTGTCCACTCGAAGGGCTTCGATG ACGGACTTAACACCGTCTGGCTGTCCAAAGGCATGCTGGGCGTGATAAGT AAGCTCTATCACGAGGAGGGCAAGAATCGCAAGCTGTACCTTACCGGTCA TTCTCTTGGCGGTGCTTTGGCTACCATTGCCGCCGCTCATTTGGTGTTCG TCGAAAACATGCATGTCTCCGGAATCCTCAGCATCGGCAGTCCTAGGTAC GAATTTAGATCAGATCTGATACTCGAAGTAGGTCTGTTTTGAGGAACCTC GGAAGGCTGAGGCAAAAACCTTTACCGATGCTTCCATAGGGAACCCTGTA TCTGTCCTCCTCGAACTGAAACATGTACTTTTTGCCCTGTACTTGCCAGG TATATCCGGTCAAACGTGGTTGTTACTTTGAGTGGTTTGGTTTCCCTTAT TTTTTGTCTTGGTTCCCCCGATTTTTTGCCGTTCCAGGGTCGGTGAAGGC TGAGGCTGATGTATCTGAATATACGATTTTTCAAACTTGTTGGAATAATG ATCGCCGGCAAAACTCGGACTCTTTCACTTTCGTAATACACAAAAAGTTG ATAAAGCTGGACATTAGAGGGAAAATGTAAAAACAAATGCACCATGTAAA CTATGGACAACGCTGACTGGGTCCAATATGTAAGGCTCACTTGACGTTAA AGAAACGTCGTTGTCTCCCACGTTGTTGGATTTGATGTGAGTAGCTTTAG TCCCAAAATTGTACAGAATATCGATTCGTGTGCTGTAGCATGGAAGTTTA CAGCTGTCGTCGTCGTTCATCCGTGCGCAGGGTTTTCGACTCCGGGATGG CCAAGATTTTCAATGAGAAAATCAACTACGGTGTTGCCATGAAAGACAAA TATTTCCGATGCAGGAACAACAACGACATCGTCACACGAGTCCCTTTCGG CTACGCGCATGTGGGCACCGAGATCTACTTTGATCGATTGTGAGTAGTAT ACACTTCGTATTTGAGCAAAGAGCCATTTTCACGATACCTACTCCAGTAT ATTGATAGTTAATTGTGCTGTGTAATTATTTGGTGGGGGGGAGACGACAA TTGGAGTTGTGTGGGATTAATTACGCGGACGGGGAATGAAGGCTTTTTGC ATGCATGTAACGGGATTCGAAAACGATGTGAGACAGTAGACGCAGCGAAA AAATCGATTAGATCAAAAGAAGACGTCGTCTCGAGAGATAGTGTTTGCAG TGTCTTCTGTTTGTTGCCACCGGTTGTCGCTCGCTATAGAGGTCGCGCTG GGCAGCGTTGTGCGTCTAGCACACGTCCTTGGACCCCCTAGAGGTGCCCC GATACGTTTCTGAGTCTCCAAAGTGTCTATGGATGGCTTATGATTATTAC TTTCGTTGTTTTGGGGCACCGGCATGCAAAACCAATTGCTACCATTCCTG CTGCCTACTTAAAGTTAGCTCGGAAAGCTGCTCCGCCGGGATTAACCCAG ACACACCATGCGCGCTTTCATTGTGCACTGCCACATGCTTCTGGTATGTT TTGCGCATCTATGAGTACGGTCAATACGTCAACGTGTACCCACCACGATG AACTTGTAAGTGGCACCTAGTCTCGCAGGATTTGGCTTCGACTTCATTGA AAAAATCACAAGGTTGACGGCACAACAGTCAAGTTTACTTCTAATTGATG CTTCCGTGATCGTACCCTTACACGACGTTACCATAAGGTAAAACAACACC GCTGTGGTTAGTTATTGAAATTTTCGGTATTCCATTTATGTCATGAAGCT TAACAACAGTTATGGAGTACTCATACGGAATTCAGCTAATCGACAATTTC TATTAGATTGCTAATCGCTTTCCCTTAATCTCGTGGAATATGTGGTTTTG TTCAAGCATTCCTCCTAACCGTGCACATATATTTTTCTTTTCCCCGCTAA ACTGTTATCGATTACACCATCACCGACGTGCGGCCCACGGCTTCTTCGCT GACAGCGGAACATTGTCAACCACTAGCTTTTTGGACCGTTTTCTTGGGCG AGTGAATGCGCTTGTTCACGGAAACGTTCTGAAGGGCATCAGCGACCACT CCTCCAACGAATACCTTCGCCTATTGAAGCAGGCAGTGATACACAACAGG GTGCCGTTGTTGGACAAGACCAAAGGCATTGCCATAGACGTTGCACGCAA GGTATGTCTTTGTTTGCCGTAAGAACTGCGACCGATTAGTGCTTTCAATG AAGGTTAGTAGGATGACAGGGCCCTAGATATTTAGTGTATTGTGTCGATC CCCAATAATTGCAACTCTTCAGCAATTTTTCCAATGCAAGAGGAGGTAGC GAAATGAAACCTTATTGAACAAGTCCGAGTTTTTTCAAGAGGCGGAATTG CATGTCGACAGTAGCTCAGATTGGTTATCCTATATTTTTCTGAAGCTTCC ACGGTTTCAAGCTGACCTTGCGGAAGCATGGAAGCAGAGGTCATGGCGCC GTGGTGAACGAGACTTGATTATGCAGCTTCCTGCGTTCCGGCGTCGTTTT GTTTTTGTGGCCCATTTTGTCGTTTGACTGCAAGATCAAATTTAAAGTTA TATGGTTTTGTGGTGATCAAATACAAAGTACATTGGACCGATCTTGCGTT CCGAATCCCCTGCAGGTACTTCCTGGCGTGAAGCAGAAAGGCCAAACTCA CAAGGGCACACTAGGAGCAGCAAAAGCAGCAGCTGTAAATGCGTCCCAGG AGCTGTGACGTTTGATTATCGAAGTAGAGAGGGAACGTATGGCCTTGGGA GTCTTTCTACATTACCGTCTCGTGCTCTTCTCATTGGTTAGCGAGAGCTC AACTTGGAGACAACACGAGACGCAGTTGGGTCGCGGATTAGCTCGCCCAA TCAGACGGTCTTACTGTACTACAAGTAGCTGTGTTCCTTGTACTGATACA TGTTGTTATCAGGAATTGCTTTCGTTTTCTCCTGGTGTACTTAGAAGTAG GGAGTCTATCTTGTTGTTGCTATCTCCAAGATGTACCAGGGGCTGTGGGG TACGTTTTTCTATCTACGTGCTTGCCTGTCGACATTTCTATCTCCCCCCT GGTGTGAGTAGTTAGATTCATCTGTGGAATTAAACGCTCACGTTCGACTG ACGCATATTCATGCGTTTCCGTCGAAGGCCATCAAGCATTCTCGGTTTGG TTTTGCGTGTTTAGAGCGTTTGCAATCGTTATGTGAGGAGTGTGTGGTGT GTCTAAATATGCATACATGTATAGGGCCGGAAAATTGTTTGCCAGTTGTA GAGAATTCAACAGGCTAGATAGTGAAAACACTAAAAGGATTATCTGCGTT GTCATATACACCGTAGCCCTGTTTGTTGTCGAGTGTTTTATATCATGAAA TTGAGACCACCCACGGTCAATTTATAGCTGATATGATTGATTGAGGGTGA CTCCTCCCCCCCAGTCGTTGTATAGGTATGGTGTAAATACTGATGACTTT GTGAACAGTGATTATTGGAAAAGGAGGGGTAAATGAAGGTGATCGAAACG AATGTATGGAGCATATGGTACCTACGCTACGGTCATGACGATGTCTCTCA TCGTGTACGTTTAGCTTTGGGGTGATCGTGTTGCCTGTGCCAAGATGAGA CATGATTGTGTAGATATTTGGTTTTATGAGGGGGAACAGAGTAAGACGGT TAAACGCCGCCGTCGCAATGTGATCGAGATATGGAGTCACTCTTCGTGGC AGCGTGTCAATGTGTACCGTACGCGATTTACCATATCATTGGGGGGAAAC GGTGGCCAATATGCAGGTACAAGACGGTCGGCGAGCGGTGGTGACGACGA GGTCCAACCGCAAACACATCTAATGGAGGCAATG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig6083:687..11170-

>mRNA_H-paniculata_contig6083.13773.1 ID=mRNA_H-paniculata_contig6083.13773.1|Name=mRNA_H-paniculata_contig6083.13773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig6083:687..11170- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCAAGATCGCCTACTTGCCCAAGGCCGCTGCGGAGGACGCACTGGT
TGGAAACGACACGTCCACGGGCATGGGTTTCACCCAATTCCACTGGTTTG
AGATGAGCAAGATCGCCTACTTGCCCAAGGCCGCTGCGGAGGACGCACTG
GTTGGAAACGACACGTCCACGGGCATGGGTTTCACCCAATTCCACTGGTT
TGAGGTCGATGCAGAGCGCGCGAAAGCTGCCTACTTCGACAAGATTCATG
ACACGGAGGGTTATGTAGCCGCCAATGATGAAGTCATCTTCGTGGCTTTC
AGGGGCACCAAGGAGGCCATTGATTGGGCTACGAACATCAACCTCATATC
AAGGAGAGTCCCTGCGGCGTGGGGTATCGGTCTGGAAATAGACGCCGAGG
TGCACGAGGTCGATGCAGAGCGCGCGAAAGCTGCCTACTTCGACAAGATT
CATGACACGGAGGGTTATGTAGCCGCCAATGATGAAGTCATCTTCGTGGC
TTTCAGGGGCACCAAGGAGGCCATTGATTGGGCTACGAACATCAACCTCA
TATCAAGGAGAGTCCCTGCGGCGTGGGGTATCGGTCTGGAAATAGACGCC
GAGGTGCACGAGGGCTTCGATGACGGACTTAACACCGTCTGGCTGTCCAA
AGGCATGCTGGGCGTGATAAGTAAGCTCTATCACGAGGAGGGCAAGAATC
GCAAGCTGTACCTTACCGGTCATTCTCTTGGCGGTGCTTTGGCTACCATT
GCCGCCGCTCATTTGGTGTTCGTCGAAAACATGCATGTCTCCGGAATCCT
CAGCATCGGCAGTCCTAGGGCTTCGATGACGGACTTAACACCGTCTGGCT
GTCCAAAGGCATGCTGGGCGTGATAAGTAAGCTCTATCACGAGGAGGGCA
AGAATCGCAAGCTGTACCTTACCGGTCATTCTCTTGGCGGTGCTTTGGCT
ACCATTGCCGCCGCTCATTTGGTGTTCGTCGAAAACATGCATGTCTCCGG
AATCCTCAGCATCGGCAGTCCTAGGGTTTTCGACTCCGGGATGGCCAAGA
TTTTCAATGAGAAAATCAACTACGGTGTTGCCATGAAAGACAAATATTTC
CGATGCAGGAACAACAACGACATCGTCACACGAGTCCCTTTCGGCTACGC
GCATGTGGGCACCGAGATCTACTTTGATCGATTGGTTTTCGACTCCGGGA
TGGCCAAGATTTTCAATGAGAAAATCAACTACGGTGTTGCCATGAAAGAC
AAATATTTCCGATGCAGGAACAACAACGACATCGTCACACGAGTCCCTTT
CGGCTACGCGCATGTGGGCACCGAGATCTACTTTGATCGATTCGGAACAT
TGTCAACCACTAGCTTTTTGGACCGTTTTCTTGGGCGAGTGAATGCGCTT
GTTCACGGAAACGTTCTGAAGGGCATCAGCGACCACTCCTCCAACGAATA
CCTTCGCCTATTGAAGCAGGCAGTGATACACAACAGGGTGCCGTTGTTGG
ACAAGACCAAAGGCATTGCCATAGACGTTGCACGCAAGCGGAACATTGTC
AACCACTAGCTTTTTGGACCGTTTTCTTGGGCGAGTGAATGCGCTTGTTC
ACGGAAACGTTCTGAAGGGCATCAGCGACCACTCCTCCAACGAATACCTT
CGCCTATTGAAGCAGGCAGTGATACACAACAGGGTGCCGTTGTTGGACAA
GACCAAAGGCATTGCCATAGACGTTGCACGCAAGGTACTTCCTGGCGTGA
AGCAGAAAGGCCAAACTCACAAGGGCACACTAGGAGCAGCAAAAGCAGCA
GCTGTAAATGCGTCCCAGGAGCTGTGAGTACTTCCTGGCGTGAAGCAGAA
AGGCCAAACTCACAAGGGCACACTAGGAGCAGCAAAAGCAGCAGCTGTAA
ATGCGTCCCAGGAGCTGTGA
back to top