mRNA_H-paniculata_contig60812.13772.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 244 bits (624), Expect = 3.920e-78 Identity = 108/162 (66.67%), Postives = 126/162 (77.78%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+CNA +LPGG DSTVTQ CFN++PLDRA DD P DP++ GR+ +DPPCRA+ETDQ+ G DV TAR++LPQGL+CERC +QMVYYTGNSC H GY EFNPPSWP CAP+K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 144 STYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 305
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.330e-77 Identity = 110/163 (67.48%), Postives = 126/163 (77.30%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGM-CGDGDSYPEEFWNCADIAITSSG 486
+T GH+E F+C+ADDLP G DS VTQ CFN+YPLDRA DD SPIDP + GR+ +DPPCRA+ETDQ G GDV TAR+QLPQG+TCERC +QMVYYTGNSC H GY EFNPPSWP CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 92 ATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSDG 254
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 248 bits (633), Expect = 1.400e-77 Identity = 109/162 (67.28%), Postives = 124/162 (76.54%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+C+ADDLP G DS VTQ CFN+YPLDRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TAR+QLPQG+TCERC +QM YYTGNSC H GY EFNPPSWP CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 141 STYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDG 302
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 249 bits (637), Expect = 4.270e-76 Identity = 111/162 (68.52%), Postives = 126/162 (77.78%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+C+ADDLPGG DSTVTQ CFN++PLDR DD SPIDP++ GR+ +DPPCRA+ETDQ G GDV TAR++LPQGLTCERC +QMVYYTGNSC H GY EFNP SWP CAP K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 143 STYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDG 304
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 240 bits (612), Expect = 2.720e-74 Identity = 108/155 (69.68%), Postives = 120/155 (77.42%), Query Frame = 1
Query: 16 GHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITS 480
GHLEFFICNA+D+ D VTQGCFN +PLDRA DDGDASPIDP+H GRY++DPPCRA ETDQ G GDV TARY+LP GLTC RC +QMVYYTGN+C HPGYDEF+P S P CAP KEDW+ GMCG+ YPEEFWNCADI ITS
Sbjct: 214 GHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITS 367
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.110e-73 Identity = 106/162 (65.43%), Postives = 120/162 (74.07%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+C+ DLP G DS VTQ CFN YPLDRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TARYQLP+G+ C+RC +QMVYYTGNSC H GY EFNP SWP CAP+K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 148 STYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 309
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.450e-73 Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+C+ADDLP G DS VTQ CFN++PLDRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TAR+QLPQG+TCERC +QM Y+ NSC H GY EFNPPSWPG CAP+K DWI G CGDGD+YPEEFWNCAD++ITS G
Sbjct: 112 STYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDG 271
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.150e-72 Identity = 107/162 (66.05%), Postives = 126/162 (77.78%), Query Frame = 1
Query: 1 STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
ST GH+E F+C+A+DLPGG DSTVTQ CFN++PLDR DD SPIDP++ GR+ +DPPCRA+ETDQ G GDV TAR++LP+G++CERC +QMVYYTGNSC H GY EFNP SWP CAP K DWI G CGDGD+YPEEFWNCADI+ITS G
Sbjct: 143 STYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDG 304
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 222 bits (566), Expect = 6.390e-69 Identity = 99/157 (63.06%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 16 GHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
GH+EFFICNAD++ D Q CFN YPL RA D + SPIDPN+PGRY+VDP CR ETDQ+KP G G V+ A YQLP+GLTC+RC +QM YYTGNSC H GY+EF P SWP CAP K DWI LD +CG+ SYPEEFW CAD AIT G
Sbjct: 125 GHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDG 280
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.360e-59 Identity = 93/157 (59.24%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 16 GHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSKPAGTGTGDVVTARYQLPQGLTCERCTIQMVYYTGNSCYHPGYDEFNPPSWPGKCAPNKEDWITLDPGMCGDGDSYPEEFWNCADIAITSSG 486
GH EFF+CN DD+ D TQ CFN +PL RA DDGDASPIDPN+PGRY+VDP CR ET+QS + G + RY LP + CE C +QMVYYTGN+C H GY+EFNP SWP CAPNK DWI LD +CG YPEEFW C+D ++TS G
Sbjct: 154 GHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSIEGYN--IKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDG 306 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60812.13772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig60812.13772.1 >prot_H-paniculata_contig60812.13772.1 ID=prot_H-paniculata_contig60812.13772.1|Name=mRNA_H-paniculata_contig60812.13772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp STSQQGHLEFFICNADDLPGGADSTVTQGCFNKYPLDRATDDGDASPIDPback to top mRNA from alignment at H-paniculata_contig60812:55..843- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig60812.13772.1 ID=mRNA_H-paniculata_contig60812.13772.1|Name=mRNA_H-paniculata_contig60812.13772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=789bp|location=Sequence derived from alignment at H-paniculata_contig60812:55..843- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig60812:55..843- >mRNA_H-paniculata_contig60812.13772.1 ID=mRNA_H-paniculata_contig60812.13772.1|Name=mRNA_H-paniculata_contig60812.13772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig60812:55..843- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |