mRNA_H-paniculata_contig608.13769.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI) HSP 1 Score: 833 bits (2151), Expect = 7.280e-293 Identity = 451/556 (81.12%), Postives = 482/556 (86.69%), Query Frame = 1
Query: 295 KMVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGM-------------SGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTVS 1923
K VVLSA+ITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIET+TVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVA G+TEDK+ +K+F+LVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLH MIQDSKREAAKEEA RRAKELREK KE LRG+ GMG SGSSMYT+ S+YG+ + G+ + G+S AA S TP D RVSTQGMKLGGASK K+ML+SLIKEDHLVSIP +K++AGG E AV AAVVAASVHPV+LSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKV+LAS DPSG FTFQTHPKVNKG+YDS+KTLASKDQAKGFPVARPVGVLRWSL+TTDESQMPLTINCWPE EGGGQMNVSMEYELVRPMELHDVRISIPLGSSA PEIAAIDGSHRH QEGTLLWTMDLLDQSN+TGSLEFNIASRD EAFFPITVTFAS QLFCDVQVAGV NT+T +PIQYGYTA+L+A+SYTVS
Sbjct: 14 KQVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGS--GMGXXXXXXXXXXXXXXSGSSMYTEASDYGVASTGGTXXXXXXXXXXASLGLSVP---------AAGPASSTPVADTRVSTQGMKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTVS 558
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA) HSP 1 Score: 548 bits (1413), Expect = 5.900e-182 Identity = 317/550 (57.64%), Postives = 397/550 (72.18%), Query Frame = 1
Query: 301 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLG---GASKGKS-MLESLIKEDHLVSIPKTNKSAAGGAE---PAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADP--SGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVR-PMELHDVRISIPLGSSAAPE--IAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESY 1914
VVLSAAITT+NGKALLARQ+VDMSRIRIEGLLAAFPKLMGTGNKQHTFIETD+VRY+YQP+E LFLLL+TNK SNIVEDLETLRMLSKVVPDVA G+ EDK+A + F+LVFAFDEV+T GG +E I L Q+K N+EMDSHEERLHNMIQ+SKREAA++EA+R+A+E+R++QK + +GG M+G + G+ G A XXX PS T+GMKLG G +KG++ ML+SL+ E+ L +P +AAGGA P V AA AA+V+PV+L +EE+LS LTREGTLE +EVKGTLSLTAN +GA++CK++LA+ P +GL FQTHPKVN+ LYD+S+ LA KD KGFPV RPVGVLRWSL+T+DE+ PLT+NCWPE EG G + VS+EY L R ELHDV IS+PLG +AAP +A G++RH+A G L+W ++L+D SN +GSLEF + SRD E FFPI + F S+ L+ +QV GV + D API +G ++L+ ESY
Sbjct: 11 VVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQVKVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQKALQA---AGGSAMAGXXXXXXXXXXXXXXXXAADPYGY--------GTRTAAPAXXXXXXXXXXPSRA--------TKGMKLGLGGGTAKGRNAMLDSLMAEEKLAPVPA---AAAGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAHLTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGL-AFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASGSLEFTVQSRDTEGFFPIQMQFTSSLLYAQLQVGGVVSIDAEAPIPFGMVSSLTTESY 537
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA) HSP 1 Score: 517 bits (1332), Expect = 9.430e-170 Identity = 296/555 (53.33%), Postives = 399/555 (71.89%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGN-KQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMA---LRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLGGASKGKSMLESLIKEDHLVSIPKTN----KSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASAD----PSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELV-RPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANT-DTNAPIQYGYTAALSAESYTV 1920
MVVLS AI T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G KQHTFIETDTVRYVYQPI+NLFLLL+TNKASNIVEDLETLR+LSK+VPDVA G+TE+++++K F+LVFAFDEV+TTGG++E++TLQQIKTNMEMDSHEE+L MI+ SK ++AK++A+R+AK ++E+ +E+A L T G+G + + +Y G+ G +G D A S SF + + ++ ++GMKLG SK SML+SL++ED+L +I T + AG E AV+A V+ P+ L+VEE++ LTR+G +++ EVKG+L+LTA ++ A KV LA+ P+GL FQTHPKVNK YDS++ L KD +KGFPV R VGVLRWS S+TD+S +P+T+NCWPE EG G+MN+S+EY++ + ELH+V +SIPLG++ PE+A+IDG++RH+ +E L+W MDL+D SN +G+LEF +A RD + FFPI V+F+S L+ DV V V D +API Y T LS +SY V
Sbjct: 1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQIKTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKERLRELARDRLGATRSGLGGAYQGIGGGGMDYVGGSGAFDGQAGIGQDAFGASTPSVYAPSTVDSF------TVSKTETVKTVSKGMKLGAPSKAASMLDSLVQEDNLSNIAATRAPPLSAGAGLGEEAVSAPVI--QHQPIQLAVEEKIVAHLTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAGL-NFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSGALEFVVAGRDAQVFFPIIVSFSSQILYADVNVTAVTGLEDGSAPIPYSLTKLLSPDSYIV 546
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN) HSP 1 Score: 504 bits (1298), Expect = 3.760e-165 Identity = 275/542 (50.74%), Postives = 371/542 (68.45%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTVS 1923
MVVLSA++ T+NG+ L ARQFV+M+R+R+EGLLAAFPKLMGTGNKQHTFIETD+VRYV+QP+E+++LLL+TNKASNIVEDLETLR+LSKVVP++A G +E+K+++KAFDLVFAFDEVITTGG++E I L+QI+TN+EMDSHEE+LHNM++ +K ++AK++A+ +K ++ +Q+E + G YG G DFG GM A +G + +P P + V + MKLGG S+++ + ED + P S A+ P++L VEE+L+ L++EG LES ++KGTLSLTAN +GA CKV +A + TFQ HPKV+K +++ + KD +KGFPV RPVGV+RWSLSTTDE+ +PLTINCWPE EG G MNV++EYEL RPMEL+DV I IP G APEI ++DGSH H+A+E L W +D++D SNK G+LEFNI +RD + FFPI VTF S L+ D +A V D +AP+ Y AL+ +S+ ++
Sbjct: 1 MVVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTGNKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQIRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSGDD---------------PYGGGGG----------DFGGGMGMPAPPMGGESPYGESPYGAPAPPPEPVVQVKSMKLGGKKNKSSLMDKMAAEDGISIAPAFTPSKPASXXXXXXXXXXXAA-QPISLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSFRIA 515
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA) HSP 1 Score: 499 bits (1285), Expect = 5.220e-163 Identity = 283/547 (51.74%), Postives = 381/547 (69.65%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGG----MGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAGGA-EPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAAPEIAAID-GSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTV 1920
MVVLSAA+ T+NG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG++QHTF+ETD+VRYVYQPIE L+LL++TNKASNIVEDLETLR+LSK+VP++A G+TE+KI +K F+LVFAFDEV+T GGH+E+IT+ QI+ N+ M+SHEE+LH MI++SK + KEEA RRAK ++E+Q+ G S G MG G SM E S S +G ++ S A P P A +GMKLGG+SK + +++ + ED+L + +G A PA AAA VA HPV+L +EE+++ + REG LE ME+KGT++L AN D +KCKV+LA A + LFT+QTHPKV+K Y+ L KD+ KGFP + +G+LRWS++T D+SQ+P++INCWPE E G MNV++E+ MELH+V+ISIPLG+S PEI ++D GSH+HN L+W ++L+D NKT SLEFN+A D +AFFPI+V+F ST L + VA + +++ +APIQ+G L +SY V
Sbjct: 1 MVVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTGSQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQIQVNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQRSSKAGGMSSGGMAGMGGGGDSMAESVPETDYTTRPFSELS--------SGQQTSTSSEWGYSQSPKADPEPVTA------KKGMKLGGSSKKQQIMDKFVSEDNLAPLSAKGNDTSGKAMTPATAAAPVA--THPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKTSSLEFNVAQDDADAFFPISVSFGSTHLKAGLDVANILSSENDAPIQFGLAKMLVTDSYQV 528
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA) HSP 1 Score: 494 bits (1273), Expect = 4.470e-161 Identity = 291/560 (51.96%), Postives = 385/560 (68.75%), Query Frame = 1
Query: 286 YSAKMVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQ-HTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAA---GLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIG-NARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQ------GMKLGGA-SKGKSMLESLIKEDHLVSIPKTNKSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADP-SGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYEL-VRPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTVS 1923
Y A MVVLSAA+ T+ GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT KQ HTF+ET+ VRYVYQ ++NL+LLL+TN+ASNIVEDLETLR+LSKV+P+VA LTE+ +A+K+F+L+FA DEVITTGG++E I LQQI+TNMEM+SHEE+LHNMI+ SK E+AK++AS A+ +++KQKE G SGG GM GIG N+R ++FG +G S+A + AA SP S++ GM L A +K KS+ ++L++ED L + +K++ A + AAV + PVTLS+ E++S L+REG +E E+KG+L+LTA D A C V L A +F+F THPKVNK Y+ + L K+ KGFP ARPVG+L+W+ S T E +PL INCWPE E GQMNVS+EY + V+ +ELHDVRI IPLG++AAP I ++DGSH+HNA G L+WT+DL+D SN TGSLEFN+ R +AFFPI V FAS +L+ V+V V + AP+ YG T +S+E Y ++
Sbjct: 3 YFANMVVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAKQQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQIRTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQMRMGASGG-GM-----------VGIGSNSR--------SEFGASGFDSSAHSGSSFADPVPAASSPVSTAQASSSSRARQPVKGMSLNPAGAKNKSVEDALMREDKLAPLISASKNSVSDAPTPLTAAV---AQQPVTLSIVEKVSATLSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTGSLEFNVQQRSADAFFPIGVHFASPKLYSGVEVVSVNAGGSGAPVVYGLTKNMSSEEYVIN 539
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA) HSP 1 Score: 476 bits (1225), Expect = 3.860e-154 Identity = 271/550 (49.27%), Postives = 374/550 (68.00%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGG---MGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRVSTQGMKLGGASKGK-SMLESLIKEDHL---VSIPKTNKSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTVS 1923
MV+LSAA+TT+NG+ALL+RQFVDM+R+R+EGLLAAFPKL GTGNKQHTF+ETD+VRYVYQP+E++FLLL+TNKASNIVEDLETLR+LSKVVP++A G +EDK+++ AF+LVFAFDEVITTGG++E I ++ I+ N++MDSHEE+L NM++ SK +AAK++A ++ ++++Q++ G GG GM G M D +++ XXXXXX A A P+P P + + QGMKLG KGK ++ + ED L S+P+ + A A+ P+ LSVEE+L+ L++EG LE+ ++KGTLSLTAN D A C++ +A + TF THPKV+K ++S + K AKGFPV R VGV+RW+LSTTDE Q+PLTINCWPE EG GQMNV++EY R MEL+DV I IP G ++ PEI ++DG+H+H+A+ L W +D +D N TG+LEFNIA +D AFFPI V+F S L+ DV ++ V +T+ + I Y ++ +S+ ++
Sbjct: 1 MVILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTGNKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRTIRQNLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAMKTGMGGGGPMAGMGGGDMDED------------------DEYNXXXXXXXXXXXXXXFMDAYANPAPPPEPEPIIQVQGMKLGKKKKGKVDLMSKMAAEDGLDVRASMPQEEIADAPXXX------XXXATSQPIALSVEEKLTISLSQEGALEAFDLKGTLSLTANDDVAAACRLTVAHKTAAAGTTFATHPKVDKKAWESDGIVQMKGNAKGFPVGRAVGVVRWALSTTDEQQVPLTINCWPEDEGDGQMNVNIEYTAARSGMELYDVSIKIP-GCASNPEIVSVDGTHQHDARSEILDWQLDCIDSGNPTGTLEFNIAQKDEGAFFPIEVSFRSKSLYYDVPISSVESTEGHGSIGYSLDKKVTVDSFRIA 525
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA) HSP 1 Score: 474 bits (1221), Expect = 4.510e-153 Identity = 280/555 (50.45%), Postives = 377/555 (67.93%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG--NKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSN-DFGRAGGMSAAXXXXXXSFGAAAAPSPTPAVDMRV-STQGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAGG--------AEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAAPEIAAID-GSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTV 1920
MVVLSA++ T+NGKAL+ARQFV MSRIRIEGLLAAFPKL+G+ N QHTFIETD+VRYVYQPIENLFLL++TNKASNIVEDLETLR+LSK+VP+ GLTEDKI +K FDL+FAFDEVITTGGH+E+ITLQQI+ N+ M+SHEE+LH MI+ SK +AKEEA R+AK L+E++++ L G + G+ G S DT R + GFS+ G A A S+G + SPT D V +GM+LGG SK + +++ L+ ED+L +P +A A PAV HP+ + +EE+++ L REG +ES+E KGT+ LT+N+ A +C+V++ A + LF +QT+PKV+K Y+ +A KD +KGFP + VGVLRWS +T D+ +P++INCWPE E G MNV++EY + RP +ELH+V I IPLG+SA+P + ++D G+HRHN L+W ++L+D+SNK+ SLEF++ R +AFFPI V FAS QL V VA + + + PI + + AESY V
Sbjct: 19 MVVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGSEAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQIQVNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQEQRRQDKLSGATSMSGIEGGSTGEDTFAE-----RHMSSGGFSSAPPGSAMYADHAPLPSSASYGGVS--SPTSRRDEPVLPKKGMQLGGGSKKQQLMDKLVTEDNLTPLPSAASTAXXXXXXXXXXVATPAVEV------THPINILLEEKITGALNREGAVESLETKGTMFLTSNTAEACRCQVIMTPAK-NPLFAYQTNPKVDKKAYEQEHRIALKDASKGFPQGKGVGVLRWSAATQDDEHVPISINCWPE-EDGADMNVNVEYSVDRPGLELHNVSIVIPLGTSASPNVLSVDSGTHRHNRSSEELVWEIELIDESNKSASLEFSVPQRSSDAFFPIQVRFASNQLSAGVDVANITDLE-GKPIHFSLQKSAVAESYKV 557
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A1V9ZC55_9STRA (Coatomer subunit delta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC55_9STRA) HSP 1 Score: 464 bits (1193), Expect = 2.920e-145 Identity = 265/557 (47.58%), Postives = 369/557 (66.25%), Query Frame = 1
Query: 274 PIESYSAKMVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSNDFGRAGGMSAAXXXXXXSFGAAA----APSPTPAVDMRVSTQGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAG----GAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTV 1920
P + MVVLSAA+ +NGK ++ARQFV++SRIR+EGLL AFPKL+ + ++QHTFI+T++VRYVYQPIE+ FLLL+TNK SNIVEDL T+++++K+VPD+ LTE I K FDLVF FDE++T GGH ENITLQQI+TNMEM+SHEE+LH MIQ +K+E A + R+ + ++E+Q+E A + GM +S + S YG GS +SGF+ S + SF AA AP + + R T GMKLGG+ G S L+++ ED L IP +AA A+P AAAV S PV +++EE+LS L R+G +E +EVKG+L + N ++ C++ L ++ +G+ FQTHPKV+K L++S LA KD +K FP +R V VLRW++ T DES +PL I CWPE EG G+M VS+EY + R M L +V I IPLG++ P+I+ IDG +RHN EG+LLW +D +D SN +GSLEF+I + +AFFPI V+F S ++CD+ V V T +P++YG+ +S +SY +
Sbjct: 304 PSRRFLGAMVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLASESRQHTFIDTESVRYVYQPIESYFLLLITNKTSNIVEDLHTMQLMAKLVPDICGTLTEAHIREKQFDLVFGFDELLTAGGHSENITLQQIRTNMEMESHEEKLHLMIQKTKQENAIADMKRQQQRIKEEQREKARMEKAAGM----TSPFNRNSSYG---GFGSNSSGFT---------SPSASSSSNSFKAAEPYIEAPKQSSSSSSR--TSGMKLGGSKPGNSFLDAMAAEDDLKDIPPMAMAAANIPAPTAKPEPAAAV---SHEPVGIAIEEKLSVVLNRDGAVEQLEVKGSLFVAGNDPESSVCRLRLRHSNANGI-NFQTHPKVDKKLFESQSILALKDDSKPFPPSR-VAVLRWAIKTQDESFLPLNITCWPEEEGNGKMTVSLEYSMDREMNLENVNIIIPLGANDLPQISHIDGDYRHNPSEGSLLWHLDTIDSSNSSGSLEFSIRGNNLDAFFPIGVSFFSRSIYCDLAVDSVIRTSDGSPVKYGFDQLVSTDSYVI 837
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Match: A0A0P1AVH5_PLAHL (Coatomer subunit delta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVH5_PLAHL) HSP 1 Score: 443 bits (1139), Expect = 3.030e-141 Identity = 256/554 (46.21%), Postives = 361/554 (65.16%), Query Frame = 1
Query: 298 MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAAGLTEDKIANKAFDLVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEASRRAKELREKQKEMALRGTSGGMGMSGSSMYTDTSEYGIGNARGSGNSGFSNDF------GRAGGMSAAXXXXXXS---FGAAAAPSPTPAVDMRVST----QGMKLGGASKGKSMLESLIKEDHLVSIPKTNKSAAGGAEPAVAAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVMLASADPSGLFTFQTHPKVNKGLYDSSKTLASKDQAKGFPVARPVGVLRWSLSTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAAPEIAAIDGSHRHNAQEGTLLWTMDLLDQSNKTGSLEFNIASRDPEAFFPITVTFASTQLFCDVQVAGVANTDTNAPIQYGYTAALSAESYTV 1920
MVVLSA++ TRNGK L+ARQFV+++RIR+EGLLAAFPKL+ +G ++HTFI+T++VRYVYQP+EN F+L++TNK SNIVEDL +++L+K+VPD+ A L+E I +K F+LVF FDE++T GGH ENI + QI+ NMEM+SHEE+LHNMI +SKR AAK++ R ++E+Q+E A R GMG SGS ++ S +G S FS+ F ++ MS+ S + + AP + M++ T QGM LG S GKS ++++ ED L IP + +P +A AV S P+ VEE+++ +TR+G LE +EVKG++ ++ N A C++ L + + G+ +FQTHPKV+K LYD LA +D +K FP +R V LRWSL T DES +PL I CWPE EG G+MNVS+EY L R M L +V I IPLG AP +A +DG ++HN+ EG+LLW D + +N +G+LEF I +AFFPI+V+F S ++ DVQV V + + I +G+ LS +SY +
Sbjct: 1 MVVLSASLLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSGTREHTFIDTESVRYVYQPLENFFVLIITNKTSNIVEDLHIIQLLAKLVPDICAPLSETSIRDKQFELVFGFDELVTAGGHSENINVSQIRMNMEMESHEEKLHNMILESKRAAAKDDMKRHTARIKEEQRERA-RLERAGMGGSGSGLH---SSFG---------SSFSSKFKSPRSDNKSSFMSSPRSPSATSPTSYNSRPAPVVSKGAGMKLGTSSSGQGMGLG--SGGKSFMDAMAAEDGLKEIPPMSAVVETVQKPEIAVAV---SHDPIGAVVEEKITVVITRDGALEQLEVKGSMYVSVNDPSAGCCRLKLRTGEIEGI-SFQTHPKVDKRLYDKDSVLALRDPSKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGDGKMNVSVEYSLDRDMVLDNVNIIIPLGGHDAPSVANVDGQYQHNSAEGSLLWHHDQISSANNSGTLEFTIRGNHLDAFFPISVSFFSRSVYSDVQVEAVEKVEDGSSIAFGFEKLLSTDSYQI 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig608.13769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig608.13769.1 >prot_H-paniculata_contig608.13769.1 ID=prot_H-paniculata_contig608.13769.1|Name=mRNA_H-paniculata_contig608.13769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=543bp MVVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIback to top mRNA from alignment at H-paniculata_contig608:3518..20714- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig608.13769.1 ID=mRNA_H-paniculata_contig608.13769.1|Name=mRNA_H-paniculata_contig608.13769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17197bp|location=Sequence derived from alignment at H-paniculata_contig608:3518..20714- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig608:3518..20714- >mRNA_H-paniculata_contig608.13769.1 ID=mRNA_H-paniculata_contig608.13769.1|Name=mRNA_H-paniculata_contig608.13769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3258bp|location=Sequence derived from alignment at H-paniculata_contig608:3518..20714- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |