mRNA_H-paniculata_contig6069.13751.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE) HSP 1 Score: 864 bits (2233), Expect = 1.050e-267 Identity = 681/1310 (51.98%), Postives = 768/1310 (58.63%), Query Frame = 3
Query: 3 EGGLPLLLCLARAPPRVDTSRSLSMPMSDDDDDSAGTVSAALVGESCAG-GDWEMFVSAVRLLRRCCMLAANRSDLLALKA-----------------PGVLLHQLLEVLHRGASTGGANPAGGGG----NTGGAEQCPPGIVEDLLAMMEQLGQDVASTAEVELRSHEEVSFDTTEEIPAAADQS--------MDVDGEAGQQAAAADTVTIDXXXXXXXXXGLEGCSDDNMEDEEQDEGDGEVMCEEKRKGVQEEVESSTKHLSFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGH--PMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGANGDAGS--------AGDWKAYFARPGLPAALKMLAGLCRGHPTAQALLGERGLLKPLHWMEGTSTSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------AASTPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAG-GLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXN--------ALVSTVTAFNVIHVACHNEAARADRSMRVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVAAHLAKIGGAGSTAARQPQRLRSIMRAFVDECRTAQVEAERGRYSEVGTP--VKGAGSGVAASVGA-SHAVGEGITGRLHECAGFVAVLSLLFQSLEEWEHCKHSVLEQLIRHAGAQKARGVEGSGLEGRGGRRRSRSFVGSTNSPRVSAITSPGAASAPHTGAGGKRKRSLSNSLAXXXXXXXXXXGPAANVEGVAGAEYSPGAGGAGMMQVEGSEENKMSAAEATEXXXXXXXXXEAAISP--ARPAVVFCRVVDALQRALKSGGGAGGSVGAVEVFLSGGDDFLQAASRE------------AHSAYESAVSPMSSGGGVEEGIRAIGLREKFAAGVMAIGEGGEEGAQGGGRGNGEEKRVVSACRERVMNLLCEGELFAVTSSRS 3629
EGGL LLL LA+ P + V + G S +G GDWE+F AV+LLRR CML+ANRSDLL+LKA PG+LLH LLEVL RGA+ GG A G G ++CPPG+VEDLLAMMEQLGQDVA T +++ + + + A AD+ +D ++G +D G EG E G E + Q E ES TKH+SFLFEALEEPAL+DVLGRTPALAQAVSRLLPFLTYGR AAA LLA+KF VV W+DVV D ++ A GGK+G P SPAQLRRRC+MAAAEG+G GRS VIR CL+E GF+ETAV F+L +APSVPP S GDWKAYF R GLPAALKMLAGLCRGH AQ+ L ERGLL+ LHWMEGTSTSG+VGLLAETLLEA AQDNALTG E++ LR+ETRAAKRKLAQARRERAL AMGVR GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AA+TPAWMSEMMGLEEE GLTCMVCHEGY+CK DDDG+GD G+DAA GL+RLVGIVASRAM+ HGGG N HADAVAALERCCR + GR XXXXXXXXXXXX ALVSTV AFNVIHV+CH+EAARADR+MRVPK+EWEGA LRNSRVACNSLLPLRS TT +ERYQ GL+RHMANL EV+QG APRL L++QDVRLLLLRLAHQES+S DCGGGAARSN+QL+PYQLQ AAHLAKI G S+ ARQ QRLRSI RAF DECR A+ +AERG V TP V A A S V EG+ RLHEC+GFVAVL+LL Q +EEW CK VLEQLIRHAGA+KARGV GSG+EGRGGRRRSRSF G +SPRVSA S XXXXXXXXXX XXXXXXXXX ARPA++FCRVVDALQ ALKS AH AYE A+ P+S GGV + A+GL+E FA+ V+ GGE A G +E+ ACR RV+NLLCEGE+FA+ SRS
Sbjct: 7530 EGGLSLLLTLAQPPAGPSAAEE--------------EVENSPEGLSASGSGDWEVFALAVKLLRRSCMLSANRSDLLSLKASACWCLHAAFFFVLFVAPGILLHHLLEVLQRGAAGGGRGQADGAAAAQLGAAGTDRCPPGVVEDLLAMMEQLGQDVAKTVTLDVGPSGDRGEEKADAAAAFADKGKVSSANKGVDSASDSGXXXXXXXXXAVDVDEGVAAVDGGEGGXXXXXXGER-----GGTALEVDDELEQRETES-TKHVSFLFEALEEPALMDVLGRTPALAQAVSRLLPFLTYGRKAAAGLLAEKFAEVVRWDDVVTDDLQERAAGGKAGDGPPTSPAQLRRRCYMAAAEGLGLGRSANVIRACLLERGFLETAVTFLLLEAPSVPPHLSAXXXXXXXXXXXXXXXGGDWKAYFERAGLPAALKMLAGLCRGHAGAQSFLAERGLLERLHWMEGTSTSGEVGLLAETLLEAVAQDNALTGAEITRLRDETRAAKRKLAQARRERALKAMGVRATGAGKSCAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAATTPAWMSEMMGLEEEAGLTCMVCHEGYQCK-------------------------------------------------------------------DDDGEGDVGIDAAAQGLDRLVGIVASRAMA--HGGG-NXXXXXXXXXXXHADAVAALERCCRGE-GRSGGGXXXXXXXXXXXXXXXXXXXXXALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSSTTPDERYQAGLDRHMANLGEVLQGQNFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKITGT-SSGARQAQRLRSICRAFFDECRLAEADAERGHDGAVATPAAVSTAXXXXXXXXXARSPVVPEGVRSRLHECSGFVAVLTLLLQPVEEWTRCKRFVLEQLIRHAGARKARGVAGSGVEGRGGRRRSRSFAG-PSSPRVSASGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARPALIFCRVVDALQSALKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHEAYERAIKPLSKNGGVVAILEAMGLKEDFASAVV----GGEREA-----GTMDEREKAEACRARVLNLLCEGEVFALAGSRS 8737
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: D8LLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX1_ECTSI) HSP 1 Score: 531 bits (1367), Expect = 6.840e-169 Identity = 394/642 (61.37%), Postives = 425/642 (66.20%), Query Frame = 3
Query: 693 STKHLSFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGANGDAGSAGDWKAYFARPGLPAALKMLAGLCRGHPTAQALLGERGLLKPLHWMEGTSTSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------------------ASTPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAG-GLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXN--ALVSTVTAFNVIHVACHNEAARADRSMRVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQ 2510
STKH+SFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGR AAA LLA+KF +AYF R GLPAALKMLAGLCRGH AQ L ERGLL+ LHWMEGTSTSG+VGLLAETLLEAAAQDNALTG EV+ LREETRAAKRKLAQARRERAL AMGVR G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+TPAWMSEMMGLEEE GLTCMVCHEGY+CKP +VLGVYV+ KP+LG+D+HEL GDFLLDP DLP + XXXXXXXXX G+GD G+DAA GL+RLVGIVASRAM G G N+ RARAHADAVAALERCCR + GR XXXXXXXXXXXXX ALVSTV AFNVIHV+CH EAARADR+MRVPK+EWEGA LRNSRVACNSLLPLRSPTT +ERYQ GL+RHMANL EV+QG APRL L++QDVRLLLLRLAHQES+S DCGGGAARSN+Q++PYQLQ
Sbjct: 45 STKHVSFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGRKAAAGLLAEKFA---------------------------------------------------------------------------------------------EAYFERAGLPAALKMLAGLCRGHAGAQGFLAERGLLERLHWMEGTSTSGEVGLLAETLLEAAAQDNALTGAEVTRLREETRAAKRKLAQARRERALKAMGVRAAGTGKSSAVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAATEAGXXXXXXXXXXX-----XXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMQG----GGNAGXXXXXRARAHADAVAALERCCRGE-GRSGGXXXXXXXXXXXXXXXXALVSTVAAFNVIHVSCHQEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQVIPYQLQ 583
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA) HSP 1 Score: 390 bits (1002), Expect = 1.770e-107 Identity = 382/997 (38.31%), Postives = 528/997 (52.96%), Query Frame = 3
Query: 3 EGGLPLLLCLARAPPRVDTSRSLSMPMSDDDDDSAGTVSAALVGESCAGGDWEMFVSAVRLLRRCCMLAANRSDLLALKAPGVLLHQLLEVLHRGASTGGANPAGGGGNTGGAEQCPPGIVEDLLAMMEQLGQDVASTAEVELRSHEEVSFDTTEEIPAAADQSMDVDGEAGQQAAAADTVTIDXXXXXXXXXGLEGCSDDNMEDEEQDEGDGEVMCEEKRKGVQEEVESSTKHLSFLFEALEEP---ALIDVLGRTPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVAD--AMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGANGDAGSAGDWKAYFARPGLPAALKMLAGLCRGHPTAQALLGERGLLKPLHWMEGTSTSGQVGLLAETLL-EAAAQDNALTG------DEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASTP------AWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSMRVPKTEWEGAALRNSRVACNSLLPLRSPT----------TSEERYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVAAHLAKIGGAGSTAARQPQRL---RSIMRAFVDECRTAQVEAERGRYSEVGTPVKGAGSGVAASVGASHAVGEGITGRLHECAGFVAVLSLLFQSLEEWEHCKHSVLEQLIRHAGAQKARGVEGSGLEGRGG 2900
GGLPLLL LA PP++ +S ++ G+ AA VG A E+ A+RLLR CCML +NR+ L+A+KAPGVLL +L+EVL RG+ G G + G+ + + + LL ++E L Q+ + P+ AD + + E + AAA + XXXXXX EG D++ + + EGD E ES +HL FL AL E AL+ L PALA +VSR +PFLTYGRTAAAR+LA++ +VV WE V + A+ A N P S ++RR+CF+ A + MG SG+++R L++ GF+ + AFV++ VP SG GD +W AY+ RP L A+K L+GLC+GH +Q +L E+G+L LH ++SG VGLLAE LL E A+ TG + V +RE ++AAKR++AQ +R +AL AMG R+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +WM EM LEEE+GL CMVC EGY +P LGVYV+ + + + + +L GDFL+ XXXXXXXXXX S +VA R +S + A R+ A R S G+ L++TVTA N IH++CH EA R+DR +R PKTEWEGAALRNSRV CNS+LP++ P +E+ + G++ H ++L EV G + RLALVL D+RLLLL+L++QE+M GGG+ SN+ L+ +QLQ+AAHLA + STA+ P + +S++ AF++ + A+ A G + AA+ A +A+ LHEC F VL+++F + W + LEQ +RHAGA++ARG+E SG++ + G
Sbjct: 5536 NGGLPLLLALAH-PPQLPHQH-----LSTEEGSEGGSTIAATVGAMRA----EVCTLALRLLRHCCMLHSNRARLVAIKAPGVLLRRLVEVL-RGS---------GSGTSAGSSESNGAVADSLLQILELLVQEHTDSG-------------VAASSPSTADDIVPM--ETDTELAAAASXXXXXXXXXXDAMDTEG-QDESEDSDGAAEGD--------------EDESGAQHLHFLLTALLEDGEGALVMALLSKPALAVSVSRTMPFLTYGRTAAARMLAERLVQVVDWEAVAEEESAIRAAENAQPPRAP-SAQEVRRQCFLGALDMMGAD-SGRLVRHSLLQAGFVASTAAFVMQ---GVPDDKSG-RGD-----EWAAYYKRPALERAIKTLSGLCKGHTPSQQVLLEQGVLAALHIAASNASSGSVGLLAEALLDEVASNAECTTGPPAAPAEAVKAMREASKAAKREMAQLQRAKALQAMGQRSQPAAAKVPAALASPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASWMDEMNALEEESGLACMVCQEGYVLRPAEPLGVYVYARCLQSQRLSDLEGDFLVKESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAP---------------MSPYQVVALRQLSAD---------AREYRSEQQQRAGFMTRRRYPSLGGQARV-------------GGLIATVTALNAIHLSCHREAVRSDRGLRNPKTEWEGAALRNSRVLCNSILPIKPPAPASATAAPARNAEDSWSKGVDLHFSHLREV--GKSESSRLALVLHDIRLLLLQLSYQETMRSASGGGSVSSNMTLLWHQLQLAAHLAGATTSPSTASPDPSQANHYKSLLAAFIESAKVAREVAAAGAHES---------PEAAANAKAPYAM-------LHECVCFAMVLTMVFSTPTAWLSNRSLFLEQALRHAGARRARGIESSGVQDKAG 6416
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A7S2LBI9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBI9_9STRA) HSP 1 Score: 193 bits (491), Expect = 4.920e-46 Identity = 228/790 (28.86%), Postives = 330/790 (41.77%), Query Frame = 3
Query: 696 TKHLSFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPP--------SSSGANGDAGSAG------DWKAYFAR-PGLPAALKMLAGLCRGHPTAQ-ALLGERGLLKPLHWMEGTS-----------------TSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASTPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLER-LVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSM-RVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQ---GLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVAAHLAKIGGAGSTAARQPQRLRSIMRAFVDECRTAQVEAERGRYSEVGTPVKGAGSGVAASVGASHAVGEGITGRLHECAGFVAVLSLLFQSLEE-----------WEHCKHSVLEQLIRHAGAQKARGVEGSG-LEGRGGRRRSR 2915
T + L E+L E + T L + ++ LLPFLTYG+ ++++ LA++F + + + NGG S M F+ + P +R L+ GF + F+++DAP +PP S+ GA A W+AY++R PGL AL+ML GLC H + Q AL+ G ++ HWME TS T ++GL+AETLL+A + N ++ R+ T+ K++LA+ RR RAL M + A AA+ P+WM+EM +E+E GLTC VC EG +P +LG+YV +K ++ +P GG + G F P S + R L+G +A + R AVA++ R XXXXXXXXXXXXX + V+TVT N IH CH A +ADR+ + PK EWEGAALRNSRV+CNS+ PL S + E + E +AN + G R + VL D RLLLLR+A+ E ++ DCGGG+ SN L+ L +A K + +A +R + AF+ E R V + + L C + ++ S E W+ ++ +IR AG +KA+GV SG + GR GR RSR
Sbjct: 571 TSTVQVLLESLTESESTTL---TAPLRKIIADLLPFLTYGQKSSSKALAEQFVAHIQFP-----RLAYTLNGGNSNIVMDT-------FVQTLLTLPPVVVCNELRAQLLSLGFTGSTAQFIMQDAPRLPPPWSPALNCSTIGAKRKRSKADTEALEEQWRAYYSREPGLLMALRMLIGLCTKHGSTQTALVNCDGFVQLCHWMESTSISAANDTSAAASSSSGETRNELGLVAETLLDALQEGNEYCKSKIKAARKATKDRKKELAEERRSRALVGMNI----AALTSGGAAAFDKATESTSPSSNTVTTRRSAKVASADKSKEADSTAAAKPSWMAEMEAMEDEEGLTCAVCQEGRVFQPTELLGLYVFMKKVV-----------------IPQNKGGSKSC-------IDGTSLFLSLPMS-------------------MPRSLLGSIADEMLF-----------------RPAKAAVASVRR---------XXXXXXXXXXXXXRLSHFVTTVTGGNAIHYTCHARAKQADRNHPKAPKGEWEGAALRNSRVSCNSIFPLVSSLKNSEVPLVVFENSLANYQSSIANVVGARPKSMVWTVLHDARLLLLRIAYGEPLNADCGGGSLLSNTSLILQLLLMAEMFIKNSELEAQSAASVDHVRYLSAAFLSAMEIIGAEDYR--------------------VSSKSLMKNSTDASLMACMCCIIFNNMNVDSASESTEEKSFAKDLWKKYRNLFAHGIIRLAGRRKAQGVVNSGCISGRSGRSRSR 1252
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: B8LDH2_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDH2_THAPS) HSP 1 Score: 189 bits (480), Expect = 1.760e-44 Identity = 188/640 (29.38%), Postives = 274/640 (42.81%), Query Frame = 3
Query: 762 TPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGA--------NGDAGSAG------DWKAYFARPGLPAALKMLAGLCRGHPTAQALL------------GERG-------LLKPLHWMEGTS-------TSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERAL---NAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAST--------PAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSM-RVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQ---GLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVA 2516
+P L + +++LLPFLTYG+ + ++ LA F R V E + G S + F+ A + P +R L+ GF+ +FV+R AP PP S A + A A DW+ YF R GL A+K+L GLC H + Q LL GE L HW+E TS T+ +G+LAETLL+A +DN + D++ ++R++TR K+++A+ RR +AL +A G G A A P+WM+EM +++E G+ C VC EG +P +LG+Y ++K + L GG D+ G P S + A G G A+ AM G ++ AL + A + A S+S R N V+TV+A N IH +CH++A ADR+ + PK+EWEGA+LRNSRV CN ++PL S TS + +E +A++N + G+R L VL DVR L LR+AH E+++ DCGGG++ SN L YQL A
Sbjct: 1683 SPPLRKVIAKLLPFLTYGQVSQSKELARYFARYVKLEFL-----------GDVDQLHSHDSILMNTFVETAINLPPVGVCDNLRQELIGNGFVGNIRSFVMRGAPLQPPPWSPALYAKDSKQSTKASEASIRNLKEDWRQYFNRSGLIEAIKILTGLCARHSSTQTLLSGIQNSEKMTIDGEEDEPNVDLDFLNVCHWVESTSDNEASGITTNGLGILAETLLDALKEDNDVATDKIDSIRKKTRLRKKEIAEERRNKALVGMSAFGTLAGSAVADSTAASHASGGAESSDNRSTSMLASMFGMSAFSSSKARGATKEADKDADEKKPQPSWMAEMEAMDDEEGVICAVCQEGRTLQPSELLGLYAYMKKV-----------------SLASSQGGGKG-------DIDGTVLLMSLPVSLPRN---------LPAETGSLFRRGKTAANAMHG-------TSQALTAMAAVASGA---------SNSNRT---------------NYYVTTVSAGNAIHCSCHSKAKMADRNHPKAPKSEWEGASLRNSRVTCNVIIPLVSSKTSSVPL-MAVENALADVNTITTNTLGIRPKSMLWTVLHDVRFLFLRMAHGEALNSDCGGGSSSSNFLLALYQLYAA 2246
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A7S3QBC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBC4_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.490e-43 Identity = 196/634 (30.91%), Postives = 275/634 (43.38%), Query Frame = 3
Query: 735 PALIDVLGRT---PALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGA----------NGDAGSAGDWKAYFARPGLPAALKMLAGLCRGHPTAQALLGE--------RGLLKPLHWMEGTSTSGQV-----GLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERAL---NAMGVRTG--GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA---STPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPES--GASEDDDGDGDSGMDAAGGLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSM-RVPKTEWEGAALRNSRVACNSLLPLRSPTTSE---ERYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVA 2516
P L+ L T P L + +++LLPFLTYG+ +R LA +F V E + DA E + M F+ A + P +R L+ GF+ +F++ P PP S A A +W+AY+ R GL A+K+L GL H Q+ L + LL HW+E TS + G+LAETLL+ Q+N ++S +R++TR K+++AQ RR +AL +A G G G XXXXXXX AA S PAW+ EM +E+E GLTC VC EG + +LG+Y ++K I+ +P GG L P S G ++DD +A+ + +HG STLA A A +V CC +S+VTA N IH +CH A ADR+ + PK+EWEGA+LRNSRV CN +LPL S S+ + L H + ++ ++ G + L VL DVRLLLLR+AH ES++VDCGGG+ SN L+ Y +A
Sbjct: 1432 PMLLSSLRTTSLSPPLRKVIAKLLPFLTYGQVLQSRALAAQFLSHVHVEYLGGDASRYEHDNENKAVLMDT-------FIDTAIHLPPVPVCDTLRSELIRQGFVNKIRSFIISSIPKFPPPWSPALYSKKEKQSETEKATICTEWEAYYKRNGLQTAIKILIGLSMEHEETQSHLANIDFDSNMNQSLLTASHWIESTSDKDNIKTNGLGILAETLLDTMLQNNETVKTKISHIRKKTRERKKQMAQERRSKALVDMSAFGRLVGDVGMASSNSKASAAESDXXXXXXXLASAPTGIGKSTKASEVSLTNVKVAADDESKPAWLLEMEAMEDEEGLTCAVCQEGRTYQASEMLGLYAYMKKII-----------------IPYNKGGGRGVIDGTLMLLSLPSSL---PASLRGTDQEDD------------WYNPSMTLAATMKTTSHGA---STLA------AAASSVMGSRSCC------------------------FISSVTAGNAIHFSCHARARSADRNHPKAPKSEWEGASLRNSRVDCNFILPLMSKENSKIPVMEMENALADHQSAVHNML-GSKPKSMLWTVLHDVRLLLLRMAHGESLNVDCGGGSLTSNSALIFYSFFLA 1992
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: B7GBU1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBU1_PHATC) HSP 1 Score: 181 bits (459), Expect = 4.260e-42 Identity = 181/655 (27.63%), Postives = 265/655 (40.46%), Query Frame = 3
Query: 744 IDVLGRTPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGANGDAGSAGD-----------------------WKAYFARPGLPAALKMLAGLCRGHPTAQALLGERG-LLKPLHWMEGTSTSGQ-------VGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALN-------AMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASTP-----------AWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVASRAMS--------GNHGGGENSTLALGSRARAHADAVAALERC--CRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRS-MRVPKTEWEGAALRNSRVACNSLLPLRSPTTSEE----RYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVA 2516
I+ + + L +++LLPFLTYG+ +R LA F R + ++ E EA S S + + R F+ A + P +R L+ GF++ +F++ P+ PP+ S A G + WK YFAR G A +L+GLC+ H Q+ L L+ HW+E TS++ +GL AETLL+ +DN V+ +R++TR K++LA+ RR +AL MG T A AA P AWM EM +E+E+GL C VC EG +P +LG+Y VK + +P +D G + G + +A+ G+H G N G A ++ ++ C DS R + +TV+A N IH +CH A +AD+S + PK EWEGA LRN+RV CN +LPL S + + L H A+++ ++ G + VL DVRLLLLRLA+ ES+SVDCGGG+ SN+QL+ YQL A
Sbjct: 998 IETICLSAPLRNVIAKLLPFLTYGQANLSRELAQHFNRQI----DLSRLAELEAEDSPSS---SKSAILARTFVQTAISLPPNEVCNSLRSELIRCGFVDRLSSFIVEGMPNQPPTWSTALWPKGEGMEDLPKKKKRYKGKGTSIKRLLETSWKEYFARGGTKTAFGILSGLCQKHVETQSRLSRSPEFLRSCHWLEATSSNVSAGVDTRGLGLSAETLLDEIMEDNMKVSRLVNGVRQKTRMRKKELAEERRAKALGKISVGGMVMGKTTSMAATVNPDLQTGVRATAASFFSPVFGLFRDSSVAAQPRPAEDGMATAARAPIGKDKKSSEKPAWMDEMENMEDESGLKCAVCQEGRTLQPSELLGLYAFVKKV-----------------SIP------------------------------------------LDHCGSRASIDGTMLLKALPKELPKSLVGSHTG--NCWFLAGRSAGDDLNSTSSPSYCVGASGDSRR----------------SLFTTTVSAGNAIHFSCHRRARQADQSHSKAPKAEWEGANLRNNRVKCNIILPLVSSSGCSKVPLVAVDSALSEHQASISSLL-GATPTAMMWTVLHDVRLLLLRLAYGESLSVDCGGGSLASNVQLLYYQLSQA 1567
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A7S4R1Y5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R1Y5_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.820e-42 Identity = 181/671 (26.97%), Postives = 272/671 (40.54%), Query Frame = 3
Query: 762 TPALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGA----NGDAGSAGD------------WKAYFARPGLPAALKMLAGLCRGHPTAQALLGE-----------------RGLLKPLHWMEGTSTSGQ-------VGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAM-------GVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA----------------------------------STPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVA-SRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSM-RVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQ---GLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVA 2516
+P L + +++LLPFLTYG+ + LA KF V D + DA NG S + F+ +A + +R+ L+ GF++ AFVL+DAP+ PP S A N D D W+ YF RPGL A ++L GLC H Q+ + + LL+ HW+E TS + +GLL+ETLL+A ++N + ++ T+R++TR KR++A+ RR RAL M G T + AA + P+W+ EM +E+E GLTC VC EG +P +LG+Y ++K I +P GG G ++ V +++ R + + G E + L AR A+A+ + S + V+TVTA N IH CH A ADR+ + PK+EWEGA+LRNSRV CN + PL S +S+ + +E +A+ +V G R L VL D+R L++R+A+ E+++VDCGGG+ SN L+ YQ+ +A
Sbjct: 690 SPPLRKIIAKLLPFLTYGQVDQSSELASKFIEYVSI-DALTDAQSGTLNGCSS--------MLMETFVESAIHLPAVNVCDTLRNELIRQGFVDRVKAFVLKDAPTQPPPWSSALFAKNHDQELPDDEKKIKRELYETQWRDYFNRPGLHTAFRILIGLCTNHTPTQSFIADVDETVPDPTAKDNSNTMASLLQTCHWIESTSDNNASSISMKGLGLLSETLLDALRENNDMVTSKIDTIRKKTRNRKREIAEERRSRALVGMTSFGPVAGAATSSSLSTFGNNVAAAPAGNDTSNDAGADAARGPGSTLSSMLGTMQRVAAAVSTVTSASAPSILPSMPGSAGDSDTKDKDKSVRSTQPSWLDEMEEMEDEAGLTCAVCQEGRTLQPSELLGLYAYMKKI-----------------SVPYNQGG---------------------------------------GKGNIDGTVLLLSLPRTLPSSLDGTEMADLWF-KPARTAAEALQSTPHAASSMAAATTISSGSSSRPAH-----FVTTVTAGNAIHCTCHARARAADRNHPKAPKSEWEGASLRNSRVTCNVIFPLVSSRSSKVPL-VAVESALADYQTIVSNLLGTRPKSMLWSVLHDIRFLIIRMAYGEALNVDCGGGSLSSNSSLLFYQMFMA 1288
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A7S4PAR5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PAR5_GUITH) HSP 1 Score: 178 bits (452), Expect = 1.070e-41 Identity = 166/609 (27.26%), Postives = 246/609 (40.39%), Query Frame = 3
Query: 765 PALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSP--AQLRRR-------CFMAAAEGMGPGRSGKVIRDCLVETGFIETAVAFVLRDAPSVPPSSSGANGDAGSAGDWKAYFARPGLPAALKMLAGLCRGHPTAQALLGERGLLKPLHWMEGTSTSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASTPAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSMRVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQGLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVAAHLAKIGGAGSTAARQ 2564
P + ++R+ PFLTY R + + L F V +V+ + P+ P L R C ++ + MG + ++R+ L G + F+L ++ PS S DA W+ LP LK+L G+ RG+ AQ + G+LK +H ME S+ ++G LAE LL + A+ NA +V LR+ET + KR+LA+A+RER L MG+ G + A W ++ LEEE GL C++CHEG++ KP VLG+YV L + GS G P GAS ASR +RC +TV +V+H++CH +A RA+R+M+VP+ EWEGA LRN CN++LP+R P T + E++ A L ++ G R +V+ D+RLLLLRLA S + D GGG+A SN++LVP+ +Q+ H +G S+ RQ
Sbjct: 385 PGITNTLARIFPFLTYSRVSLIKYLVQCFLPHV---NVILPITKIAEESSDLIPPVQPIVGPLEREEHEAYVDCLVSIVQRMGQESTACLLREELTARGVVVALTDFLL----TILPSESVDKDDA----KWREAIDSVELPRVLKLLTGMIRGYDVAQLYVDGSGILKRVHIMEDMSSDRRIGSLAEELLASLAEKNAELQVKVEALRQETASKKRELAKAQRERLLQEMGLAQGSSSNFNEQ---------------------------------------AKAMGWAADE--LEEEDGLMCIICHEGFRYKPEDVLGIYV-----------------LNKKTTISSGSAAVAGAA-------------QGSPNRGAS------------------------ASRT-----------------------------DRC--------------------------FTTVCNMSVVHMSCHQQATRAERNMKVPRMEWEGATLRNQNTKCNNILPIRGPATPSHMFTEHAEKYWATLAQL--GRHEGSRFRMVVHDIRLLLLRLASGASFATDSGGGSAISNVKLVPFMVQMGFHC--LGDGASSTWRQ 828
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Match: A0A7S1YB99_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YB99_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.480e-41 Identity = 192/628 (30.57%), Postives = 277/628 (44.11%), Query Frame = 3
Query: 765 PALAQAVSRLLPFLTYGRTAAARLLADKFTRVVLWEDVVADAMEAEANGGKSGHPMSPAQLRRRCFMAAAEGMGPGRSGKVIRDCLVETG-FIETAVAFVLRDAPSVPPSSSGANGDAGSAG---------DWKAYFARPGLPAALKMLAGLCRGHPTAQALLG----------ERGLLKPL-------HWMEGTS--------TSGQVGLLAETLLEAAAQDNALTGDEVSTLREETRAAKRKLAQARRERALNAMGVRTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAST-----PAWMSEMMGLEEETGLTCMVCHEGYKCKPHSVLGVYVHVKPILGRDVHELGGDFLLDPDDLPGGSGGXXXXXXXXXXDLGGERGFYGDPESGASEDDDGDGDSGMDAAGGLERLVGIVASRAMSGNHGGGENSTLALGSRARAHADAVAALERCCRSDSGRXXXXXXXXXXXXXXXXNALVSTVTAFNVIHVACHNEAARADRSM-RVPKTEWEGAALRNSRVACNSLLPLRSPTTSEERYQLGLERHMANLNEVVQ---GLRMAPRLALVLQDVRLLLLRLAHQESMSVDCGGGAARSNLQLVPYQLQVA 2516
P L + +++LLPFLTYG+ + ++ LA+ F + E + AE S H + + F+ AA + P +R E G F V FV PS PP + A + + +WK YF R G+ AL+ML G+CRGH Q+L+ E+ KP HW+E TS T G +G+LAETLL+ ++N ++ +R TR K+++AQ RR +AL MGV XXXXXXXXXX S PAW++EM LE+E GLTC VC EG +P +LG+Y +VK + ++ G ++ L L F D G + + + + + GL+ L+ +S NS + GSR + +TV++ N IH +CH +A ADR+ + PK+EWEGA+LRNSRV+CN +LPL S +S+ + +E +A+ VV G R L VL DVRLLLLR+A+ E ++ DCGGG+ SN L+ YQL +A
Sbjct: 19 PPLRKVIAKLLPFLTYGQVSLSKELAEHFCAHIPVESL------AECEQPSSEHQKTRKFVTMDTFVQAAVNLPPTDVCNCLRS---ELGPFTRQLVRFVAEGLPSSPPPWTAALWSSSAHQQKEQEKLQMEWKHYFCRKGVKTALEMLMGICRGHQDTQSLIATVSVNIAPANEKPKEKPAPFFLQACHWIESTSDNKNPIIQTQG-MGILAETLLDELKEENPSVSKKIGEIRRRTRERKKEIAQDRRRKALGGMGVVGNXXXXXXXXXXXXSVGEFSLRSGLSLLSNFLGGSGSTAPPGAPKDGIKKSKKGGKQPAWLAEMEALEDEKGLTCAVCQEGRTLQPSELLGLYAYVKKV-SIQPNKCGDKNSIEGSVL-----------------LANLPTFLPDSLKGTTIESNWFKPA-REVGVGLKDLLDASSSY----------NSASSSGSR-----------------------------------RASQFTTTVSSRNAIHCSCHAKAKSADRNHPKAPKSEWEGASLRNSRVSCNIILPLVSSESSKVPL-MAVEMALADYQTVVSHLMGARPKAILWAVLHDVRLLLLRIAYGEPLNSDCGGGSLASNTSLLFYQLFLA 571 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6069.13751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6069.13751.1 >prot_H-paniculata_contig6069.13751.1 ID=prot_H-paniculata_contig6069.13751.1|Name=mRNA_H-paniculata_contig6069.13751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1187bp MPMSDDDDDSAGTVSAALVGESCAGGDWEMFVSAVRLLRRCCMLAANRSDback to top mRNA from alignment at H-paniculata_contig6069:1917..11961+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6069.13751.1 ID=mRNA_H-paniculata_contig6069.13751.1|Name=mRNA_H-paniculata_contig6069.13751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10045bp|location=Sequence derived from alignment at H-paniculata_contig6069:1917..11961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6069:1917..11961+ >mRNA_H-paniculata_contig6069.13751.1 ID=mRNA_H-paniculata_contig6069.13751.1|Name=mRNA_H-paniculata_contig6069.13751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7122bp|location=Sequence derived from alignment at H-paniculata_contig6069:1917..11961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |