mRNA_H-paniculata_contig6068.13749.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6068.13749.1
Unique NamemRNA_H-paniculata_contig6068.13749.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: D8LST6_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST6_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 4.770e-127
Identity = 198/226 (87.61%), Postives = 210/226 (92.92%), Query Frame = 1
Query:    1 MDDPDVFGDISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAA--PETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            M+DPD+FGDISRMHQKQITIHAGDEGLAETGR+LYVE DWTTDDLLQAAGRRLDL STPKRMFN NGMEVADVMMIE+REVIFFTQG DYVA    + +  +G  S+SGLPA+VGAYKV EFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINS QNVIMVFELAEGGDLYQFLC APGQRV+EEEGRA+FRQ+
Sbjct:    1 MEDPDIFGDISRMHQKQITIHAGDEGLAETGRVLYVEPDWTTDDLLQAAGRRLDLVSTPKRMFNCNGMEVADVMMIEDREVIFFTQGGDYVAPLLADGDDADGGGSTSGLPAVVGAYKVNEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSSQNVIMVFELAEGGDLYQFLCGAPGQRVDEEEGRAVFRQI 226          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A6H5JP74_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP74_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 1.350e-119
Identity = 197/254 (77.56%), Postives = 209/254 (82.28%), Query Frame = 1
Query:    1 MDDPDVFGDISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNG----------------------------MEVADVMMIEEREVIFFTQGADYVAA--PETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            M+DPD+F DISRMHQKQITIHAGDEGLAETGR+LYVE DWTTDDLLQAAGRRLDL STPKRMFN NG                            MEVADVMMIE+REVIFFTQG DYVA    + +  +G  S+SGLPA+VGAYKV EFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINS QNVIMVFELAEGGDLYQFLC APGQRV+EEEGRA+FRQ+
Sbjct:    1 MEDPDIFCDISRMHQKQITIHAGDEGLAETGRVLYVEPDWTTDDLLQAAGRRLDLVSTPKRMFNCNGEGVKLLECVIAKCLHGDVLLHWGVVLGGMEVADVMMIEDREVIFFTQGGDYVAPLLADGDDADGGGSTSGLPAVVGAYKVNEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSSQNVIMVFELAEGGDLYQFLCGAPGQRVDEEEGRAVFRQI 254          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A8K1FK23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK23_PYTOL)

HSP 1 Score: 197 bits (500), Expect = 3.240e-58
Identity = 102/222 (45.95%), Postives = 142/222 (63.96%), Query Frame = 1
Query:   19 FGDISRMHQKQIT---IHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEG-DTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            F DI   +   +    I A   G  +  + L+V+  WT D+ L AA +RL++     R+FNS+G E+ D+M+IEE +++FF+ G  + A       EG + +      +VG YKV   LG+GGFGEVR+G HQLT +RVALKF+ KS +  +G  ERTTTEIQCLTAL HP+II+L++ IN P +V++VFEL EGGDL+ +L   PG  + E EG ALF Q+
Sbjct:    4 FSDIDDFNDHAVAGKPIKAYRNGHFDNPKALFVQHHWTWDEFLCAASQRLEMVPMASRVFNSDGAEIDDIMVIEENDMLFFSAGRSFKAPSSAAGEEGTNNTDEKFAQVVGGYKVTTLLGRGGFGEVRLGIHQLTNDRVALKFILKSEMGSLGDVERTTTEIQCLTALNHPSIIKLLRVINEPNHVVLVFELLEGGDLFHYLKHVPGGGLPEVEGAALFSQI 225          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A2D4BN57_PYTIN (CAMK/CAMKL protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN57_PYTIN)

HSP 1 Score: 201 bits (510), Expect = 7.500e-58
Identity = 106/224 (47.32%), Postives = 149/224 (66.52%), Query Frame = 1
Query:   19 FGDISRMHQ-----KQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPA-IVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            FGDI   +      KQI  +    G  E  + L+V+  WT D+ L AA +RL++     R+FN++G E+ D+M IEE +++FF+ G  +  AP +   EG+TS+    A +VG YKV   LG+GGFGEVR+G HQLT ++VALKF+ KS +  +G  ERTTTEIQCLTAL HP+II+L++ IN P +V++VFEL EGGDL+ +L + P   ++E EG ALF Q+
Sbjct:    4 FGDIDDFNDHAAQGKQIKAYRN--GHFENPKTLFVQHHWTWDEFLHAASQRLEMVPMASRVFNADGAEIDDIMCIEENDMLFFSAGRSF-KAPSSAGDEGNTSADDKFAQVVGGYKVSTLLGRGGFGEVRLGIHQLTNDKVALKFILKSEMGSLGDVERTTTEIQCLTALNHPSIIKLLRVINEPNHVVLVFELLEGGDLFHYLKNVPSNGLDEPEGAALFSQI 224          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A3F2RYY7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RYY7_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.760e-56
Identity = 96/223 (43.05%), Postives = 143/223 (64.13%), Query Frame = 1
Query:    4 DDPDVFGDISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            DD D F D +   +    I A   G  +  ++L+V++ WT D+ L AA +RL++     R+FN++G E+ D+M IEE +++FF+ G  + A         +++     ++VG YKV   LG+GGFGEVR+G HQLT E+VALKF+ K+ +  +G  ERTTTEIQCL AL HP+II+L + IN P ++++VFEL EGGDL+ ++   PG  + EE+G  LF Q+
Sbjct:    5 DDMDDFNDHAVQGKP---IKAFKNGHFDNPKVLFVQNHWTWDEFLCAASQRLEMVPMASRVFNADGAEIDDIMCIEENDMMFFSTGRSFKAPNSGNEDASNSNDEKGASVVGGYKVTTLLGRGGFGEVRLGVHQLTNEKVALKFILKNEMGSLGDVERTTTEIQCLMALNHPSIIKLFRVINEPNHIVLVFELLEGGDLFHYIKQTPGG-LSEEDGVGLFTQI 223          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A6A3ZU81_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ZU81_9STRA)

HSP 1 Score: 190 bits (483), Expect = 5.730e-56
Identity = 98/223 (43.95%), Postives = 144/223 (64.57%), Query Frame = 1
Query:    4 DDPDVFGDISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            DD D F D +   +    I A   G  +  ++L+V+  WT D+ L AA +RL++     R+FN++G E+ D+M IEE +++FF+ G  + A         ++S   +  +VG YKV   LG+GGFGEVR+G HQLT ++VALKF+ KS +  +G  ERTTTEIQCLTAL HP+II+L++ IN P ++++VFEL EGGDL+ ++   PG  + EE+G  LF Q+
Sbjct:    5 DDMDDFSDHAVQGKP---IKAFKNGHFDNPKVLFVQHHWTWDEFLCAASQRLEMVPMASRVFNADGAEIDDIMCIEENDMLFFSTGRSFKAPNSGAEDAQNSSDEKVANVVGGYKVTTLLGRGGFGEVRLGVHQLTNDKVALKFILKSEMGSLGDVERTTTEIQCLTALNHPSIIKLLRVINEPNHIVLVFELLEGGDLFHYIKQFPGG-LSEEDGVGLFSQI 223          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A1V9YCU2_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YCU2_9STRA)

HSP 1 Score: 196 bits (499), Expect = 9.880e-56
Identity = 102/221 (46.15%), Postives = 141/221 (63.80%), Query Frame = 1
Query:   19 FGDISRMHQKQIT---IHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            FGD+   ++  +    I A   G  E  + L+V+  WT DD L +  +RL++     R+FNS+G+EV D+M IEE +++FF+ GA +   P  E   G     G   +VG Y+V   LG+GGFGEVR+G HQLT E+VALKF+ KS +  +G  ERTTTEIQCLTAL HP+II+L++  N P +V++VFEL EGGDLY  L + P   + EEEG  +F Q+
Sbjct:    4 FGDLDDFNEHDVQGRPIKAYKNGCFENPKTLFVQPHWTWDDFLCSCSQRLEMVPMASRVFNSDGVEVDDLMCIEEGDMLFFSTGAPF-KIPGHEEDAGSVDHIGQGGVVGGYRVTTLLGRGGFGEVRLGIHQLTNEKVALKFILKSEMGSLGDVERTTTEIQCLTALNHPSIIKLIRVFNEPNHVVLVFELLEGGDLYHHLVNLPTGGLVEEEGVLVFSQI 223          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A836CH35_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH35_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.980e-55
Identity = 122/310 (39.35%), Postives = 160/310 (51.61%), Query Frame = 1
Query:   25 DISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPAIVGAYK--------------------------VCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEI--------------------------------------------QCLTALKHPNIIRLVQHINSPQ------------------------NVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            DISR+H++ +T+H    G  +  + L +  +WT DD L AA  R+ LASTP R+FNS+G+E+ D+MMI++  +IF + GAD+V  P  E    D   SG+P +VG ++                          V +FLG+GGFGEVRVGEHQLT ERVALKFLRKS + D+GAA+RT TE+                                            QCLTALKHPNIIRL QH+  P+                          ++ FELAEGGD+++ LC  P QRV EEEGRA F Q+
Sbjct:    7 DISRVHRR-VTLHRN--GRIDGSKQLQLRPEWTMDDFLCAAEARMGLASTPSRLFNSDGVEITDLMMIDDDAIIFVSHGADFV--PPGEDGAADAGESGMPTLVGGFRCVEDSSXXXXXXXXXXXXXXXXXXXXVLDFLGRGGFGEVRVGEHQLTRERVALKFLRKSEMCDIGAAQRTATEVRTKQETLRIALYTIVAKRVLXXXXXXXXXXXXXXXXXXXXXXXVQCLTALKHPNIIRLAQHVALPRYXXXXXXXXXXXXXXXXXXXXXXXXXVLAFELAEGGDMFKHLCRLPSQRVSEEEGRATFHQI 311          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: T0PYH2_SAPDV (CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PYH2_SAPDV)

HSP 1 Score: 196 bits (497), Expect = 2.390e-55
Identity = 97/205 (47.32%), Postives = 134/205 (65.37%), Query Frame = 1
Query:   58 IHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDLYQFLCSAPGQRVEEEEGRALFRQV 672
            I A   G  E  + L+V+  WT DD L +  +RL++     R+FNS+G+EV D+M IEE +++FF+ GA +    ++E       + G   +VG Y+V   LG+GGFGEVR+G HQLT E+VALKF+ KS +  +G  ERTTTEIQCLTAL HP+II+L++  N P +V++VFEL EGGDLY  L   P   + EEEG  +F Q+
Sbjct:   18 IKAYKNGCFENPKTLFVQPHWTWDDFLCSCSQRLEMVPMASRVFNSDGVEVDDLMCIEEGDMLFFSTGAPFQIPGQSEAEASSVDNIGSGGVVGGYRVTTLLGRGGFGEVRLGVHQLTNEKVALKFILKSEMGSLGDVERTTTEIQCLTALNHPSIIKLIRVFNEPNHVVLVFELLEGGDLYHHLVHLPSGGLVEEEGALVFSQI 222          
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Match: A0A7S3M3Q3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3Q3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.920e-55
Identity = 91/184 (49.46%), Postives = 129/184 (70.11%), Query Frame = 1
Query:   40 HQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAGRRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVEGDTS----SSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSAIADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFE 579
            H  + ++     G+ + G+ILY+E +W   DLL AA +R+D+    KR+FN++G E+ D MMI + +++FF++  D++A PE+   +G +     S  LP  VG YKV E LGKGGF EVR+GEHQLTGE+VALKFLRK+ I  +GAAERT TEIQCL  LKH NII+++QH+ +  +VI++FE
Sbjct:   11 HTNKKSVQINQNGVFDQGKILYMEPEWDCLDLLNAASQRMDMVPAAKRVFNADGSEIDDCMMIVDDDILFFSKAEDFIA-PESLANDGPSQGGRESERLPNSVGGYKVGELLGKGGFAEVRLGEHQLTGEKVALKFLRKAEIHSLGAAERTNTEIQCLATLKHMNIIKMIQHLETANHVILIFE 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6068.13749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST6_ECTSI4.770e-12787.61Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A6H5JP74_9PHAE1.350e-11977.56Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A8K1FK23_PYTOL3.240e-5845.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BN57_PYTIN7.500e-5847.32CAMK/CAMKL protein kinase n=1 Tax=Pythium insidios... [more]
A0A3F2RYY7_9STRA4.760e-5643.05Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3ZU81_9STRA5.730e-5643.95Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A1V9YCU2_9STRA9.880e-5646.15Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
A0A836CH35_9STRA1.980e-5539.35Kinase-like domain-containing protein n=1 Tax=Trib... [more]
T0PYH2_SAPDV2.390e-5547.32CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxI... [more]
A0A7S3M3Q3_9STRA3.920e-5549.46Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6068contigH-paniculata_contig6068:810..3788 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.1
Seed ortholog evalue2.1e-48
Seed eggNOG ortholog36331.EPrPI00000023149
KEGG koko:K19008
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein kinase. Source PGD
EggNOG OGs1MBHD@121069,KOG0583@1,KOG0583@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons4
Model size675
Cds size675
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6068.13749.1prot_H-paniculata_contig6068.13749.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6068 810..3788 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930676.7831078-CDS-H-paniculata_contig6068:809..9881622930676.7831078-CDS-H-paniculata_contig6068:809..988Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 810..988 -
1691481401.8586738-CDS-H-paniculata_contig6068:809..9881691481401.8586738-CDS-H-paniculata_contig6068:809..988Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 810..988 -
1622930676.810966-CDS-H-paniculata_contig6068:1328..14761622930676.810966-CDS-H-paniculata_contig6068:1328..1476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 1329..1476 -
1691481401.8722982-CDS-H-paniculata_contig6068:1328..14761691481401.8722982-CDS-H-paniculata_contig6068:1328..1476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 1329..1476 -
1622930676.823955-CDS-H-paniculata_contig6068:1975..21241622930676.823955-CDS-H-paniculata_contig6068:1975..2124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 1976..2124 -
1691481401.8810775-CDS-H-paniculata_contig6068:1975..21241691481401.8810775-CDS-H-paniculata_contig6068:1975..2124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 1976..2124 -
1622930676.8434055-CDS-H-paniculata_contig6068:3589..37881622930676.8434055-CDS-H-paniculata_contig6068:3589..3788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 3590..3788 -
1691481401.8895242-CDS-H-paniculata_contig6068:3589..37881691481401.8895242-CDS-H-paniculata_contig6068:3589..3788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 3590..3788 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6068.13749.1

>prot_H-paniculata_contig6068.13749.1 ID=prot_H-paniculata_contig6068.13749.1|Name=mRNA_H-paniculata_contig6068.13749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
MDDPDVFGDISRMHQKQITIHAGDEGLAETGRILYVESDWTTDDLLQAAG
RRLDLASTPKRMFNSNGMEVADVMMIEEREVIFFTQGADYVAAPETERVE
GDTSSSGLPAIVGAYKVCEFLGKGGFGEVRVGEHQLTGERVALKFLRKSA
IADMGAAERTTTEIQCLTALKHPNIIRLVQHINSPQNVIMVFELAEGGDL
YQFLCSAPGQRVEEEEGRALFRQV*
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mRNA from alignment at H-paniculata_contig6068:810..3788-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6068.13749.1 ID=mRNA_H-paniculata_contig6068.13749.1|Name=mRNA_H-paniculata_contig6068.13749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2979bp|location=Sequence derived from alignment at H-paniculata_contig6068:810..3788- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGATCCGGACGTATTTGGAGACATCAGTCGGATGCACCAGAAACA GATAACTATTCACGCCGGCGATGAGGGGCTAGCGGAGACGGGGCGGATTC TGTATGTCGAGTCGGATTGGACGACGGATGACTTGCTGCAGGCAGCGGGA CGAAGGCTAGATCTTGCCTCCACGCCGAAGAGAATGTTCAATTCCAACGG TAGGTTGTTCAAAATTTTGTCGTCGTCTTCGTCTTCATCGTCTTCATCGT CGTTGTCGTCGTTGTCGTTGTCGTTGTCGTGGTCGTCATCATGGTCGTGG TCGTCGTGGTCGTCGTCATCGTCGTCATCGTCATCGTCATCGTCGTCGCC GTTGTCGTCGTTGTCGTCGTTGTCGTCGTTGCTAATTTGATACCCGGTAT GAGTGTTGTGCATGTATCGCCCTCGCCATTCCGTTGGTAGGCATGATCTG TACGGGTGCCAAAGAGAAGTGATGTGCACTCACCCTGTGGTATCGGCCGC GCTGATCGGAAACTTGCTCCTTACGAGTGCAAACTGAAAGCTTGCTACGT ACGCGTGTGCACACTGATAGAGCGTATGGTGTTGGAGGAATTTACGATTA ATAAACGCTCAAAGGTGGCGAAGTATCACCACGATCCAACTGACTCTAAT AACCGAAGAGTTTGAGGTTATGTCGTCGTCTTCAGAACCTAGCTGGTACT GAGTAATGATTTTTTCAGTCATACAGTTGCCTGGGGTCTTCGGATGTCGT CTGGACGGCCATGTTGCCACCTTTGCCATCTATATGCGCATCTTTCTCCA GCCATCCCTCAGAAGTGTCGCGGTGCTGATATCTCCTTTGGGGCTTTAAA TGTCGGGATTTTCCACTGATCATAATGTAGGGCGACACCTCAACTGCACT ATAGGTCTTGGTACAAACCGGTACCAATATTTCAGTACGTACGGGTGTTG CAGACTTAACTTAAGCTCCACCAGCTTGACGGTTGTCAGTGCTCATGTGT TGGTGACAACTGCATGGTATTGTGTCTACGGAAGCAACATGTGCCTCGTG GACAGCATTACCTTCATCGTATGTGTTTTGTGTGCACCCAAATGCCGGGA ACGTATCATCTGTGGTGACACCATCGTGGCAGCATCATTACTGTCAACGA TCACAGCAACTAGGGAGTTTTAAATCGCTTTCACTAGCTAGGGTATCGCA TCGTTAGGCAGACACAGTACCGATGGCGCACTGAGATACATATAGACGCT TTCTCTTACGTCGTTAATATTCAATTTAGTTTGTACATCAAATCCTCTCC AAGGTACGATGCGGGAGTCAGAGGTTAACTTTGGCGGTATTGGTCACGTT TTTCCAATACTGTTGCGAGCTCGCTACCCCATAATCAATATTCCGAAAAC GGGACAACTTCAAAATCACGGCGAAATATAGCATACGCGACGTCGTGACT CGTGCTGAACGACTCGCTGCGCTCACTATTAGGTACAGTTCCCATCAAGA TTCGGTGTTGCAAGTTACTTGGGCACATACTGGAAAGGTGTTCCGAAACA ACATCACCATCACCACCACCAGCCTTTAGCATGTTCGATAATAGGGACAT GAGACTTCGCCGGACGTCACGTGATAGCGACCTCTATGGCACTGTACCGA CGTGCTGACCCTAGGTATGGAGGTGGCGGATGTGATGATGATCGAAGAGC GAGAAGTGATTTTTTTCACACAGGGGGCTGACTACGTCGCTGCTCCTGAA ACAGAAAGGGTTGAGGGCGACACCTCCTCGTCGGGTCTTCCAGCGATCGT CGGAGCGTACAAGGTACGACAAAGTGCTATTTTGTGGTATGGCCGTTCTA ACAGGAATCATGTACCAAGGCGATTCATGTATTTCTTGAAGCGGCAATGC CAGATCAACCATCAATCAGGAAGCAAATGACGACAGGCGAGGTCACCGCA AGAGGATTTTTACGTGACTTCGCCTAGTGCTGCTCCAAACATTTCTCTAC AGGAACGAGAGATATCAACCTCGATAGGTGGTCAAAAATAGCAGGGGTCG GTGCTGTTCGTCGCTGAATACCCGAAGTTCTGTCATGAGACATAACGACT ACAACAGTAGTCGACCACCATAAAACCGCACGACAAAAAGGGGTAAGTGT CGCGGCACAATAACTCACCTATTATAACTCGCCTTGTACATGGTTACGAT CAACACAAACGCCACCTTTCGCATCGAACATCGTCCTGGTGGGGTAAATA CCGCAGATGCTTATGGCCATAACCATTGCCCGTGACCTTGATATCTCTTC TTGAACCAAAAGGTATGTGAGTTTCTTGGCAAGGGTGGTTTCGGGGAGGT CAGGGTCGGGGAGCATCAGCTTACGGGGGAACGCGTTGCTCTGAAGTTTT TAAGGAAAAGCGCTATCGCTGACATGGGTGCCGCGGAAAGAACAACAACG GAGATTCAATGTGAGGTTCGGCTTTCAGGGTAATTGTCAGCTGGGCGCTG AGTATACACAAGCTATTGCTCCATTACTTCGCGCTAATAGACAAGTTTTA AACAAAGGACGCGGATCCACAGTGACTGTGCGGAATGTTGATGGGCTTGA CTTTTGCTAGCGATGCCCCACAAGACCAGAATACAAATGGTCTATACTCT ATCATCATCGGCCTACGGCATTTACTTCTCCACAGCACAGGAGTTGCCAT GTTTCTTTCAGCCCGAATCCCTGCTATTTTCGAATGGACTTTAACACACT GTACTACTGTACACCGCTCAGAAACCCAAAGCTCTCGCTAACCTCCCCAG GTCTAACGGCGCTGAAACACCCGAACATAATTCGGTTGGTGCAGCACATC AACTCTCCGCAGAATGTGATAATGGTATTCGAGCTGGCAGAGGGCGGTGA CTTGTACCAATTTCTTTGCAGCGCACCTGGACAGCGAGTGGAGGAAGAGG AAGGGAGAGCACTGTTTCGGCAGGTATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig6068:810..3788-

>mRNA_H-paniculata_contig6068.13749.1 ID=mRNA_H-paniculata_contig6068.13749.1|Name=mRNA_H-paniculata_contig6068.13749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig6068:810..3788- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGATCCGGACGTATTTGGAGACATCAGTCGGATGCACCAGAAACA
GATAACTATTCACGCCGGCGATGAGGGGCTAGCGGAGACGGGGCGGATTC
TGTATGTCGAGTCGGATTGGACGACGGATGACTTGCTGCAGGCAGCGGGA
CGAAGGCTAGATCTTGCCTCCACGCCGAAGAGAATGTTCAATTCCAACGA
TGGACGATCCGGACGTATTTGGAGACATCAGTCGGATGCACCAGAAACAG
ATAACTATTCACGCCGGCGATGAGGGGCTAGCGGAGACGGGGCGGATTCT
GTATGTCGAGTCGGATTGGACGACGGATGACTTGCTGCAGGCAGCGGGAC
GAAGGCTAGATCTTGCCTCCACGCCGAAGAGAATGTTCAATTCCAACGGT
ATGGAGGTGGCGGATGTGATGATGATCGAAGAGCGAGAAGTGATTTTTTT
CACACAGGGGGCTGACTACGTCGCTGCTCCTGAAACAGAAAGGGTTGAGG
GCGACACCTCCTCGTCGGGTCTTCCAGCGATCGTCGGAGCGTACAAGGTA
TGGAGGTGGCGGATGTGATGATGATCGAAGAGCGAGAAGTGATTTTTTTC
ACACAGGGGGCTGACTACGTCGCTGCTCCTGAAACAGAAAGGGTTGAGGG
CGACACCTCCTCGTCGGGTCTTCCAGCGATCGTCGGAGCGTACAAGGTAT
GTGAGTTTCTTGGCAAGGGTGGTTTCGGGGAGGTCAGGGTCGGGGAGCAT
CAGCTTACGGGGGAACGCGTTGCTCTGAAGTTTTTAAGGAAAAGCGCTAT
CGCTGACATGGGTGCCGCGGAAAGAACAACAACGGAGATTCAATGTATGT
GAGTTTCTTGGCAAGGGTGGTTTCGGGGAGGTCAGGGTCGGGGAGCATCA
GCTTACGGGGGAACGCGTTGCTCTGAAGTTTTTAAGGAAAAGCGCTATCG
CTGACATGGGTGCCGCGGAAAGAACAACAACGGAGATTCAATGTCTAACG
GCGCTGAAACACCCGAACATAATTCGGTTGGTGCAGCACATCAACTCTCC
GCAGAATGTGATAATGGTATTCGAGCTGGCAGAGGGCGGTGACTTGTACC
AATTTCTTTGCAGCGCACCTGGACAGCGAGTGGAGGAAGAGGAAGGGAGA
GCACTGTTTCGGCAGGTATAGGTCTAACGGCGCTGAAACACCCGAACATA
ATTCGGTTGGTGCAGCACATCAACTCTCCGCAGAATGTGATAATGGTATT
CGAGCTGGCAGAGGGCGGTGACTTGTACCAATTTCTTTGCAGCGCACCTG
GACAGCGAGTGGAGGAAGAGGAAGGGAGAGCACTGTTTCGGCAGGTATAG
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