mRNA_H-paniculata_contig6066.13746.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: D7FLF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF1_ECTSI) HSP 1 Score: 493 bits (1269), Expect = 7.400e-164 Identity = 261/390 (66.92%), Postives = 301/390 (77.18%), Query Frame = 3
Query: 81 MRYSLILALAAASSVDGFLPPLSVRSFAGTPVS-NVALLSKRNGLHTSPVRLGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATAGIEDALKASGLEYTFIRVGEVVEGKEGGAATASNVTDELPIEQVVRDDIVRLSAESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISFNFVEWRAIKEAEEAERNKPXXXXXXXXXXXXXXXXXXXXXYAEIRKEMAXXXXXXXXKKAEKEARQLLESEWSASYWSRGTSETLEEYIEDPENWKRALEYGWAVVN 1247
MR L+LA A+SV+ FLP V SF S L ++R+GL + R D MS DGGK++VTGFLNSK+RTDQFVFDILQAQ +WEKIVAFSDS SFAKKRL+SRKSRYSGLLDVLEFEEGDKYDAA MEEKL+G SAWLCFDC GDK+K+SVEFAKKAG+KSMVISSTVSA+D ++AG+EDALK SGLEYTFIRVGEVVEGKEGG+ NVTDELP+EQVVRDDIVRLSAE+FMMENATN A AFGKGD+IAL YLKELRQNGTDRRTEMS +IS F+E++AIKEAEEAE+NKP YA IR++ A K EKEA++ LE EW+A +WSR TS T EEY ED +NW RA+++G+ VVN
Sbjct: 1 MRRCFALSLALATSVESFLPAPGVNSFVSRSGSYGTGLNNERSGLPAARQRAADIAMSADGGKVLVTGFLNSKQRTDQFVFDILQAQGRWEKIVAFSDSVSFAKKRLVSRKSRYSGLLDVLEFEEGDKYDAATMEEKLKGISAWLCFDCEGDKIKESVEFAKKAGVKSMVISSTVSAADASSAGVEDALKDSGLEYTFIRVGEVVEGKEGGSVMVGNVTDELPMEQVVRDDIVRLSAEAFMMENATNTAFAFGKGDDIALAYLKELRQNGTDRRTEMSTLISGGFLEYQAIKEAEEAEKNKPPPSKEELEAQEKAFQEEREAEYAAIREQNAIKRQEDDIKLVEKEAKEFLEKEWNAQFWSRTTSLTEEEYFEDDDNWDRAMKHGYDVVN 390
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A836C9Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y5_9STRA) HSP 1 Score: 293 bits (751), Expect = 1.640e-87 Identity = 189/405 (46.67%), Postives = 257/405 (63.46%), Query Frame = 3
Query: 75 GIMRYSLILALAAASSVDGFLPPLSVRSFAGTPVSNVALLSKRNGLHTSPVRLGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATAGIEDALKASGLEYTFIRVGEVVEGKEGGAATASNVTDELPIEQVVRDDIVRLSAESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVIS---FNFVEWRAIKEAEEAERNKPXXXXXXXXXXXXXXXXXXXXXYAEIRKEMAXXXXXXXXKKAEKEARQLLESEWSASYWSRGTSETLEEYIEDPENWKRALEYGWAVVNGNDRPSIRGNA 1280
G++R + +A AA GF+P S ++ + + L K S RL ++M+ GGK++V+GFL++KERTDQFVFD+L AQS W KIVAFS ST+FAKKRLISR SRYSGLLD+LEF+EGD D AVM EKLQG AWLCF CA DKV V+ AK +GIKS+V+ +T+SA+D G+ + +++G+ +TFIRVGE+ EGKE GA T + +T++LP+E V+R+D VR++AE+F ++ A NKA A GKGDE ALE+LK LR+ G DR E+++++ +V +A K AEE + XXXXXXX XXXXXXXX K +L EW ++YW R + T EEYI DPE W +A+ +V + + G+A
Sbjct: 2 GVLRLGVGIA-AAVGVCYGFVPSGSFQTSFFSQTNVAQPLCKATAAQ-SQSRL--SMMAGQGGKILVSGFLDAKERTDQFVFDVLHAQSSWSKIVAFSPSTAFAKKRLISRTSRYSGLLDILEFDEGDHCDGAVMAEKLQGVDAWLCFGCAADKVAALVDVAKASGIKSLVMLATMSAADAKANGVLEKFESAGMRFTFIRVGEIAEGKESGAITTTELTEDLPMESVLREDAVRVAAEAFRIDAAANKAFALGKGDEAALEFLKTLREQGKDRVEELTSLLEGGVATYVSGKA-KPAEEVAQETDEEKAARKAKLAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----ILTREWRSNYWRRNATLTEEEYIADPEKWAKAMARATKIVASETKSGLFGDA 397
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7S2UU40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU40_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.320e-40 Identity = 96/248 (38.71%), Postives = 145/248 (58.47%), Query Frame = 3
Query: 258 GGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATAGIEDALKASGLEYTFIRVGEVVEGKEGGAATASNVTDELPIE-----QVVRDDIVRLSAESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVIS--FNFVEWRAIKEAEEAERNK 980
G ++V+GFL K+ TDQFVFD+L Q W+KIVA S + AKKRLISR+SRYSGL DVL+F E + D M+E L+ +WLC+ C ++ VE AK + +K + + G AL+AS L YTF+RV V +G EG + + +E+ E ++ RDD+VR +AESF++ N+A++ G + ++YLK LR G RR E+ +++ F+ + ++E +E E+ K
Sbjct: 82 GESVLVSGFLKDKDSTDQFVFDVLHDQGVWKKIVACSSDVASAKKRLISRQSRYSGLSDVLDFAEAEALDEEKMKEILKDVDSWLCY-CDESELMKQVEIAKASDLKCLTVVCEAPTYSPHVKGAVAALEASDLRYTFVRVDGVRDGPEGESLAVKSWDEEIQHEGKFPTEITRDDLVRTTAESFVIPKTKNRAISLLGGSNVNMKYLKYLRGQGATRRQEIGELMTDKFDKAMSKVVEEKDEEEKEK 328
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7S2W0X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0X2_9STRA) HSP 1 Score: 158 bits (400), Expect = 8.470e-38 Identity = 110/294 (37.41%), Postives = 164/294 (55.78%), Query Frame = 3
Query: 114 ASSVDGFLPPLSVRSFAGTPV--SNVALLSKRNGLHTSPV-RLGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATAGIEDALKASGLEYTFIRVGEVVEGKEGGAATASNVTDELPI-EQVVRDDIVRLSAESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISFNF---VEWRAIKEAEEAER 974
A SV L L+ + A P+ +A S R+ L S G+A + G ++V+GF++S++RTD F FD L +EKI+A+S ++FAKKRLI R +RY+GLLDVL+F EG + E L+GC AWL F A +V+ A AG+K V+ T ++ I +L + L T ++ GE VEG EGGA + LP Q+ RD+ +R++ ES ++ + KAV KGD+ A ++KELR G R E+ N+ + +F +E +A +E EEAE+
Sbjct: 13 AGSVAALLFLLAGTATAWAPLRPGRLAPPSSRSALVRSAAPESGEATVK---GSILVSGFISSQDRTDSFGFDALNKLGIFEKIIAYSTDSAFAKKRLIGRNARYTGLLDVLDFAEGTEDALVGAESPLKGCDAWLAFGVAPGEVRACANAAAAAGVKRAVMVVTGECAEATQ--IVSSLSPTSL--TVLQCGEFVEGTEGGAVEIKDAGVSLPAGAQIARDEAIRVATESLIIPLSEKKAVGLLKGDKDAEAHVKELRTQGMSRTRELENLFNGSFAVFLEQKAAREKEEAEK 299
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7S3Y072_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y072_HETAK) HSP 1 Score: 147 bits (370), Expect = 1.680e-33 Identity = 104/315 (33.02%), Postives = 168/315 (53.33%), Query Frame = 3
Query: 84 RYSLILALAAASSVDGFLPPLSVRSFAGTPVSNVALLSKRNGLHTSPVRLGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKI--VAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATA----GIEDALKASGLEYTFIRVGEVVEGKEGG-----AATASNVTDELPIEQVVRDDIVRLSAESFMMENATNK--AVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISF---NFVEWRAIKEAEEAERNK 980
R+++++ L AA + +FA VS ++L+ + TSP R A+ GG ++VTG D+ +F++L AQ W+KI +A +STS AKK+L+SR+SRYSGLLD L FE GD + ++ L +A L +D A ++ V+ A +AG K++V++S A+D A G + A+GL T +R + + EG T NV ++ V + D++R+++ESF++++A ++ AV G D AL YL+ LR G DRR E+ ++ S EW + +EA + K
Sbjct: 41 RFAIVVLLIAACIAN---------AFAFQSVSKLSLMQPSQRV-TSPARSRVAMEIAKGGNVLVTGVYKDTTANDKHIFNVLNAQKIWKKIGFLAPEESTSVAKKKLLSRESRYSGLLDQLAFENGDPTNPVTLKAYLSEYNALLAYDVAPGDIEKIVDVAIEAGTKNLVLTSAFPAADAAVVAAAEGAQQRATAAGLTLTLLRTAPIADLVEGDPYELRGLTECNVGEDESQLMVSKGDLMRVASESFLVKSAGDRLLAVVGGDADSDALWYLRHLRSKGMDRREELEHIASGATPKLSEWARFRAEKEAAQTK 345
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7S2GCY0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCY0_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.010e-32 Identity = 93/219 (42.47%), Postives = 126/219 (57.53%), Query Frame = 3
Query: 318 FDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVATAGIEDALKASGLEYTFIRVGEVVEGKEG-GAATASNVTDELPIEQVV-RDDIVRLSAESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISFNFVEW-RAIKEAEE 965
FD+L ++KIVA +FAKKRLISR +RY+GL VLEF EG AA +K +G ++WL F+ + V AK AG+K++V V +SDV E LK SG+ YTFIR G +V+GKEG + L + VV RD+ VR++AE FM+E+A KA GDE A+ YLK+LR G R+ E+ I+ E+ +KE EE
Sbjct: 1 FDVLHKHGVFDKIVALCPDVAFAKKRLISRTARYTGLTSVLEFVEGTPSTAA---DKFEGVNSWLAFNADPADIIAQVGAAKAAGVKNIV---AVVSSDVDFGPAEAELKDSGVTYTFIRTGAIVDGKEGTNPFVCGEIATGLGADAVVTRDEAVRIAAECFMIESAGGKAFTLQNGDEKAMAYLKKLRGEGKSRQEEIMYAIAGGLGEFIEEVKEVEE 213
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7R9U5M8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M8_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.740e-31 Identity = 111/311 (35.69%), Postives = 163/311 (52.41%), Query Frame = 3
Query: 81 MRYSLILALAAASSVDGFLPPLSVRSFAGTPVSNVALLSKRN-GLHTSPVR--LGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTVSASDVAT---AGIEDALKASGLEYTFIRVGEVV-EGKEGGAATASNVTDELPIEQ---VVRDDIVRLS---AESFMMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISFNFVEWRAIKEAEEAER 974
MR +L+LA A++ G S G P ++ RN G TS L ++ + + GG ++V+GFL+ ER DQF+FDIL A W +I+A + + AKKRLISR +RY+GLLDVL+F+EGD+ D A M+ L G AW+ F+ + + A AG+K +V S T+ A D A + L A+G+ Y F+ G VV E +E G N T + + + R D+VR+ A + A A A KGD YL+ LR+ G R E+S +++ +A ++AE AER
Sbjct: 24 MRSVSLLSLALAATSAGAF------SLVGRPNRFTRRIAVRNQGAATSESADYLSESSLDLTGGSILVSGFLDDAERDDQFIFDILHAPRSWNQIIALNADNASAKKRLISRSARYTGLLDVLKFQEGDRTDVAAMKGVLDGKDAWINFNADVGSLAAMADVAIAAGLKYVVTSVTL-ADDAPVPDFAPVATKLDAAGVAYAFVASGAVVDEEEELGLVRIENCTAGQTLPEGGKIGRADLVRVVGVLAGEPSLSGAVVNAYAPLKGDNTTAAYLRGLREKGVTRAEELSAMMAGGL---KAFEDAE-AER 323
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7S1UKI3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKI3_9STRA) HSP 1 Score: 133 bits (335), Expect = 9.370e-30 Identity = 95/259 (36.68%), Postives = 134/259 (51.74%), Query Frame = 3
Query: 231 LGDAVMSVDGGKLMVTGFLNSKERTDQFVFDILQAQSKWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGDKVKDSVEFAKKAGIKSMVISSTV----SASDVATAGIEDALKASGLEYTFIRVGEVVEG-KEGGAATASNVTDELPIEQ---VVRDDIVRLSAESF---MMENATNKAVAFGKGDEIALEYLKELRQNGTDRRTEMSNVISFNFVEWRAIKEAEEAER 974
L A + + GG ++V+GFL+ R DQF+FDIL W KI+AF+ ++ AKKRLISR +RY+GLLDVL F EGD DAA M+ L G AW+ F+ + + A +G+K +V S V S D+ + L A+G+ Y F+ G V + +E G N T + + + R D+VR+ E + A A A K D YL+ LR G R E++ +IS VE+ E EAER
Sbjct: 43 LEGATVDLSGGTVLVSGFLDDTARDDQFIFDILHTPKSWAKIIAFNADSASAKKRLISRSARYTGLLDVLNFIEGDASDAAAMKGHLDGVDAWINFNADAAGLAAQADVAIASGVKYLVSSVVVPEGSSVPDMTAVAAK--LDAAGVAYAFVASGPVDDAAEETGLVRVQNATAGASLPEGGNIGRADLVRVVGELAGEPALSGAVVGAFAPVKADNNTQAYLRSLRSKGVTRAEELAAMISGGLVEF----EEAEAER 295
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A7R9WJL5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJL5_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.410e-25 Identity = 89/263 (33.84%), Postives = 139/263 (52.85%), Query Frame = 3
Query: 261 GKLMVTGFLNSKERTDQFVFDILQAQSK---WEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLCFDCAGD--KVKDSVEFAKKAGIKSMVISSTVSASDVATAGIE--DALKASGLEYTFIRVGEVVEGKEG------------GAATASNVTDELPIEQVVRDDIVRLSAESFMMENATNKAVAFGKGDEI---ALEYLKELRQNGTDRRTEMSNVISFNFVEWRAIKEAEEAERNKP 983
G ++V+G++ SKERTDQ VFD L A+ + KIVAF D SFAKKRL+ R +RY+GLLD L+F E + A E+L G ++W+ +C D VK + K G++++ I T +++ A +E AL+A G +T + VG + E EG G SN T RD+ +RL E +E NKA++F + ++ + ++ LR+ G R E+ ++I+ E+ +K EE ++ KP
Sbjct: 90 GTVLVSGWVRSKERTDQEVFDFLNAEESAFGFSKIVAFVDDVSFAKKRLLGRHARYTGLLDKLDFLEATEAFALPTAEQLDGVTSWVA-NCGNDIGMVKQIADLVKSTGVENVSILLTDASTLAAAESLEAVQALEADGKAFTVVAVGSITEDAEGAYPYAIHDFGTEGGVVPSNAT-------FSRDESLRLVTECLGLECGKNKALSFTEVHDVNATETKLVRGLREAGYTRPQEIDHMITKGVEEY--LKACEEHKKKKP 342
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Match: A0A1E7F665_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F665_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.620e-22 Identity = 81/243 (33.33%), Postives = 137/243 (56.38%), Query Frame = 3
Query: 261 GKLMVTGFLNSKERTDQFVFDILQAQS---KWEKIVAFSDSTSFAKKRLISRKSRYSGLLDVLEFEEGDKYDAAVMEEKLQGCSAWLC-FDCAGD---KVKDSVEFAKKAG-IKSMVISSTVSASDVATA----GIEDALKASGLEYTFIRVGEVVEGKEGGA-----ATASNVTDE--LPIEQVV-RDDIVRLSAESFMMENATNKAVAFGK---GDEIALEYLKELRQNGTDRRTEMSNVI 920
G +MV+G++N KERTDQ++FD++ + +++KIVAF + FAKKRL+SR SRYSGLLD L+F E A ++L+G ++WL + GD ++K AK A + ++ + T +A D +A ALK +G EYT + VG++ + EG A S + ++ LP + V R++ +R+ E+ +++ NKA+ F + + + +K LR+ G R E+ +++
Sbjct: 91 GTIMVSGYVNEKERTDQYIFDLINHEDSAFEFKKIVAFVNDAKFAKKRLLSRSSRYSGLLDKLDFSEAASEGALPTVDQLEGINSWLASVESKGDMIEQIKSIAALAKDASSLDNLSVMVTNAAGDGTSAEDRAAAVQALKDTGKEYTLLVVGKIEDRDEGKLPYKFRAFDSEIDEDASLPEDAVFSREEAMRMVTETLQLDSGANKALTFSEVTDSNTTEAKLIKGLREAGYARCQEIDHML 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6066.13746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6066.13746.1 >prot_H-paniculata_contig6066.13746.1 ID=prot_H-paniculata_contig6066.13746.1|Name=mRNA_H-paniculata_contig6066.13746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=503bp MRYSLILALAAASSVDGFLPPLSVRSFAGTPVSNVALLSKRNGLHTSPVRback to top mRNA from alignment at H-paniculata_contig6066:975..8265- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6066.13746.1 ID=mRNA_H-paniculata_contig6066.13746.1|Name=mRNA_H-paniculata_contig6066.13746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7291bp|location=Sequence derived from alignment at H-paniculata_contig6066:975..8265- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6066:975..8265- >mRNA_H-paniculata_contig6066.13746.1 ID=mRNA_H-paniculata_contig6066.13746.1|Name=mRNA_H-paniculata_contig6066.13746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3018bp|location=Sequence derived from alignment at H-paniculata_contig6066:975..8265- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |