mRNA_H-paniculata_contig605.13730.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig605.13730.1
Unique NamemRNA_H-paniculata_contig605.13730.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A6H5JVV4_9PHAE (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV4_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.310e-62
Identity = 109/192 (56.77%), Postives = 136/192 (70.83%), Query Frame = 3 
Query:   90 MAHLQGLTESDKRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLF 665
            MAHLQG+  S+KR RVL LA +EG+KA  + G LS   +    KFSPWF++ST+VSAK ALA+SPFFL Y LR+EL++ GAN DP AYGI+     A     K        R  L   Q+LANW Y +PF+M++GMGVP VG ILYS RNE +LKLSQKL+HTRVYGQM+VV++ + +M F+E MRR GGLF
Sbjct:    1 MAHLQGMDASEKRGRVLRLAHEEGMKAGGLAGLLSCAGLVAANKFSPWFRKSTSVSAKTALAVSPFFLFYLLRSELVMHGANHDPHAYGIVDDVVGADGTTGKSK--ILQPREELNAAQQLANWCYVNPFKMVVGMGVPAVGGILYSMRNEGNLKLSQKLIHTRVYGQMTVVSIAVAMMVFQETMRRRGGLF 190
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A835YR00_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR00_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.510e-40
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 3 
Query:  123 KRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNE--THLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLFIDE 674
            K+++VL LAQ EGL+     G  S+ AV+     S  F+  TNVSAKVALAISP    Y+L AE  +I A  DP  YGI   G  A+      A+ A+  R+ L  + RLAN  Y +PF  I  +GVP VG+I +    E   HLK SQK+MHTRV+GQM+V+ +L++ M FR+YM RNGGL++++
Sbjct:    8 KKEQVLSLAQHEGLRWGTAAGIASTAAVFAAQHLSQAFRVRTNVSAKVALAISPPLALYNLMAERTMIRAQHDPALYGIYPKGHVAT------AQQARQQRATLRWYHRLANGAYSNPFAFIAALGVPAVGAIFWQQSREGHAHLKFSQKVMHTRVFGQMTVLGVLVSTMVFRDYMYRNGGLYVED 187
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A835ZA60_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA60_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.130e-39
Identity = 88/207 (42.51%), Postives = 121/207 (58.45%), Query Frame = 3 
Query:  123 KRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNE--THLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLFIDEYEEETTAEQDAVVAALSHQQH 737
            K++++L LAQ EG+K   + G +S  AV     +S  F   TNVSA+VALAISP   AY + AE ++ GA  DP  YGI   G  A       A+  +     L  + RLAN  Y +PF +I G+GVP VG+I +    E   HLK SQK+MHTRV+GQM+V+ +L++ M FR+YM +NGGLF+++ E     E +     L   QH
Sbjct:    7 KKEQILSLAQHEGIKWGTIAGTISIAAVTAAQLYSKKFVAKTNVSARVALAISPPLGAYFVVAEKVMSGAQTDPAKYGIFPKGHMA-------AQPTEQRLPSLQWYHRLANTAYSNPFGLIAGVGVPAVGAIFWQQSREGHNHLKFSQKVMHTRVFGQMTVLGVLVSTMFFRDYMYKNGGLFVEDGEGHVHREHEPGATELEELQH 206
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A7S2W876_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W876_9STRA)

HSP 1 Score: 139 bits (351), Expect = 7.880e-35
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 3 
Query:  126 RDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNG 656
            R++ + +A KE  +   + G  S+ AV Y  + S WF+ S  +S KVA+ +SP    + L +E  +     +P  YG+   G  A+  +   +     L+ +L  H R ANW Y HPF ++ G  VP VGSI YS     HLKLSQK+MHTRV GQ SVV +LL+VM FR+YM R+G
Sbjct:   16 RNQCVRVAVKEAAEKTVIVGIASTAAVMYLNQSSRWFRTSLGISGKVAMVMSPIVGTFFLVSEHTMSDVKFNPRKYGLNRDGSLATAPVQMNSPNV--LKGQLMAHHRAANWAYDHPFHVLAGCAVPLVGSIFYSQTGHDHLKLSQKIMHTRVLGQASVVTLLLSVMFFRDYMDRHG 190
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A4D9CRH9_9STRA (HIG1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRH9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.540e-34
Identity = 73/189 (38.62%), Postives = 109/189 (57.67%), Query Frame = 3 
Query:  126 RDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGII-------SPGDSASDVLSK----EAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGG 659
            + +V+DLA  EG++AA   GCLS   V+   K+SPWF +S  +S KV   +     ++ L +EL++I A + P AYG +       +P D+A     K    E  G  H++ R Y +  +AN  Y HPFQM++ +  P +G   Y+   +  LKLSQ+++HTRV GQ SV+ +L   M FRE+M +NGG
Sbjct:   11 KQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMLAITGSFFLFSELVLIDAQRHPQAYGFMDTPALAAAPTDAAKPDAEKREKDEGLGMIHIKPR-YVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFREWMTKNGG 198
[Close]
BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A7S2DNA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNA0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.520e-26
Identity = 68/187 (36.36%), Postives = 98/187 (52.41%), Query Frame = 3 
Query:  108 LTESDKRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISP----GDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNG 656
            +   ++R   + LA   GL+A A+ G +S+ AV     +S  F+     S K+A  + P   +Y L +EL +I A   P  Y + S     G  + +V+ +   G +H         R  NWF  HPFQ++ G   P V  I Y+ R   HLKLSQK+MHTRV GQ SV++ L+ +M FR+YM R G
Sbjct:    9 IEREERRAECISLATWAGLRACALAGAVSAPAVLAANHYSRAFRTGLGFSGKLACVVIPCLGSYTLTSELTLIDARDYPEKYNLDSGKANIGPISQNVVREGGLGLQH---------RAVNWFNDHPFQLLAGCSAPVVLGIFYTQRKSNHLKLSQKIMHTRVIGQASVLSFLIGLMLFRDYMDREG 186
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A329RZG3_9STRA (HIG1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RZG3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.040e-25
Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 3 
Query:  126 RDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLFIDEYEE 683
            RD +   A   GLKA AV    SS AV+   K+ P F+   NVS K AL ISPF  A+ + AE  ++   ++P  Y     G   +    K         S+L   Q+ AN+ Y HP++ +I +GVP VG I         +  SQ++MHTR+YGQ SVV +LL+ M+F +YM + G   +++ E+
Sbjct:   22 RDAISWHAYTSGLKAGAVAAVFSSTAVFSANKYWPAFRNRLNVSGKTALVISPFLGAFTIVAENRLMHGARNPELYMATMDGSYVAPTKEK---------SQLKFWQKSANFLYDHPYRALITVGVPLVGGIYSYQHLNKGISTSQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGRFTVEDNED 198
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BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A662YAD3_9STRA (HIG1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAD3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.600e-25
Identity = 63/183 (34.43%), Postives = 103/183 (56.28%), Query Frame = 3 
Query:  108 LTESDKRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNG 656
            +     RD +   A   G+KA +V G ++  AV    K  P F+    VS K+AL +SPF  A+   +E  ++   ++P  Y  ++  D +   L  E + +  L      HQR AN++Y HP++++ G+GVP VG I       + ++ SQ++MHTR+YGQ +VVA+LL+ M+F +YM++ G
Sbjct:   11 MAPKSTRDAISWHAYTSGIKAGSVAGAVAGVAVLTAHKNWPAFRTRLGVSGKMALVVSPFMAAFSFVSERRMVAGARNPERY--LAAMDPSYVELQLEKQSSLKL------HQRAANYWYDHPYRVLAGVGVPLVGGIFAFQSMNSAIQRSQQIMHTRIYGQTAVVALLLSSMAFSDYMKKRG 185
[Close]
BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A1V9YRI0_9STRA (HIG1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRI0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.780e-24
Identity = 61/183 (33.33%), Postives = 97/183 (53.01%), Query Frame = 3 
Query:  108 LTESDKRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNG 656
            L+ + KRD ++  +  EGLKAAA+ G  +   V      SPWF+    VS KV LA+     ++ + AE  ++  +++P  Y         +++   EA   K     L  H RLAN+ Y +PF+ +     P VG I +     T+++ SQK+MHTR+YGQ + V +LL+ M F ++M + G
Sbjct:    6 LSATAKRDVIISNSTTEGLKAAAIAGVTAGSLVAAAHHQSPWFRNRLGVSGKVGLAVMASLASFAIVAEQDLLKGSRNPDQY--------IAELNQAEAPIEKKSDHHLALHHRLANFVYDYPFRTLAFSAAPLVGLIFFDQSRNTNIQFSQKIMHTRIYGQGACVVLLLSTMGFHDWMSKRG 180
[Close]
BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Match: A0A3M6VSV9_9STRA (HIG1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSV9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 9.970e-24
Identity = 67/186 (36.02%), Postives = 100/186 (53.76%), Query Frame = 3 
Query:  126 RDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFKRSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDVLSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRNETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLFIDEYEE 683
            RD +   A   GLKA  +T   ++ AV    K+ P F+    VS K AL +SPF  A+ + AE  ++   ++P  Y  ++  D       KEA       S+L   Q+ AN  Y HP++ +I +GVP VG I         + +SQ++MHTR+YGQ SVV +LL+ M+F +YM + G   I++ EE
Sbjct:   24 RDAISWHAYTSGLKAGTITAIFAAAAVVTSNKYWPAFRNRLGVSGKTALIVSPFLGAFTIVAENHLVHGARNPDMY--LATIDGTYVAPKKEA-------SQLKLWQKSANLLYDHPYRALITVGVPLVGGIYSYQHLNKGISVSQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGKFTIEDNEE 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig605.13730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVV4_9PHAE2.310e-6256.77HIG1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YR00_9STRA6.510e-4046.24HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZA60_9STRA1.130e-3942.51HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2W876_9STRA7.880e-3541.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CRH9_9STRA4.540e-3438.62HIG1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S2DNA0_9STRA1.520e-2636.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A329RZG3_9STRA2.040e-2536.56HIG1 domain-containing protein n=2 Tax=Phytophthor... [more]
A0A662YAD3_9STRA2.600e-2534.43HIG1 domain-containing protein n=1 Tax=Nothophytop... [more]
A0A1V9YRI0_9STRA1.780e-2433.33HIG1 domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A3M6VSV9_9STRA9.970e-2436.02HIG1 domain-containing protein n=1 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig605contigH-paniculata_contig605:6490..14239 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.5
Seed ortholog evalue1.3e-53
Seed eggNOG ortholog2880.D8LMM9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Hypoxia induced protein conserved region
EggNOG OGs2CCEF@1,2S0YR@2759
Ec32 ortholog descriptionHypoxia induced protein, domain
Ec32 orthologEc-06_003930.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1485
Cds size660
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930674.3935976-UTR-H-paniculata_contig605:6489..65781622930674.3935976-UTR-H-paniculata_contig605:6489..6578Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig605 6490..6578 +
1691481400.7618213-UTR-H-paniculata_contig605:6489..65781691481400.7618213-UTR-H-paniculata_contig605:6489..6578Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig605 6490..6578 +
1622930674.476716-UTR-H-paniculata_contig605:13503..142391622930674.476716-UTR-H-paniculata_contig605:13503..14239Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig605 13504..14239 +
1691481400.8123891-UTR-H-paniculata_contig605:13503..142391691481400.8123891-UTR-H-paniculata_contig605:13503..14239Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig605 13504..14239 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930674.4054582-CDS-H-paniculata_contig605:6578..66481622930674.4054582-CDS-H-paniculata_contig605:6578..6648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 6579..6648 +
1691481400.7713661-CDS-H-paniculata_contig605:6578..66481691481400.7713661-CDS-H-paniculata_contig605:6578..6648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 6579..6648 +
1622930674.4181106-CDS-H-paniculata_contig605:7069..71421622930674.4181106-CDS-H-paniculata_contig605:7069..7142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 7070..7142 +
1691481400.7790961-CDS-H-paniculata_contig605:7069..71421691481400.7790961-CDS-H-paniculata_contig605:7069..7142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 7070..7142 +
1622930674.4320686-CDS-H-paniculata_contig605:11637..117021622930674.4320686-CDS-H-paniculata_contig605:11637..11702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 11638..11702 +
1691481400.7868607-CDS-H-paniculata_contig605:11637..117021691481400.7868607-CDS-H-paniculata_contig605:11637..11702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 11638..11702 +
1622930674.4463992-CDS-H-paniculata_contig605:12420..126121622930674.4463992-CDS-H-paniculata_contig605:12420..12612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 12421..12612 +
1691481400.79701-CDS-H-paniculata_contig605:12420..126121691481400.79701-CDS-H-paniculata_contig605:12420..12612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 12421..12612 +
1622930674.4647012-CDS-H-paniculata_contig605:13243..135031622930674.4647012-CDS-H-paniculata_contig605:13243..13503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 13244..13503 +
1691481400.804391-CDS-H-paniculata_contig605:13243..135031691481400.804391-CDS-H-paniculata_contig605:13243..13503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig605 13244..13503 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig605.13730.1prot_H-paniculata_contig605.13730.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig605 6579..13503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig605.13730.1

>prot_H-paniculata_contig605.13730.1 ID=prot_H-paniculata_contig605.13730.1|Name=mRNA_H-paniculata_contig605.13730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
MAHLQGLTESDKRDRVLDLAQKEGLKAAAVTGCLSSGAVYYFTKFSPWFK
RSTNVSAKVALAISPFFLAYHLRAELIVIGANKDPLAYGIISPGDSASDV
LSKEAEGAKHLRSRLYPHQRLANWFYQHPFQMIIGMGVPTVGSILYSTRN
ETHLKLSQKLMHTRVYGQMSVVAMLLTVMSFREYMRRNGGLFIDEYEEET
TAEQDAVVAALSHQQHRKV*
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mRNA from alignment at H-paniculata_contig605:6490..14239+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig605.13730.1 ID=mRNA_H-paniculata_contig605.13730.1|Name=mRNA_H-paniculata_contig605.13730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7750bp|location=Sequence derived from alignment at H-paniculata_contig605:6490..14239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCAGTTCACGACACTTGCCTCTCGATAGCGCCTGTCAAGGGCAGCAAGA
ACATAAAACGAGGAGTGCCAAGGATTTTCTTAAATTGATATGGCTCACCT
ACAAGGCCTGACGGAATCTGACAAGCGCGATCGAGTGCTTGACTTGGCAC
AAAAAGAAGGTGCAGTGTGTCTCCGTCTGTCTCTGTCTGGACTGCCCAGT
GCAGTTTATCTAGAATTGACTACACTCCCTGTTGACCTCAATCTTCGTTG
CTGCTCTCTGTTACTGTCGCTCCCACAAGGGGTGCTCCTTTGGGGTACTT
GATGATCGTAGGACAAGGAGACATTGAAATATGCAATGAGCAATACCCGG
TGCCACTCCATCTTGAGTGCTCCACAACTGGTGTACGCTTTGTGCGGACA
AAGTATAACCATAACCGCAACCTATAGATAGGAGCGGTAACATCAGCGGT
AAATTACAGTGTAGAGTTTCAGTCCAAAGTGCCTGTCAAACTACTGACAA
GTTGTGCCTTCTTGCATAGTTTTGGAGCAAAAACGCTACGAGTACTGACT
GTTTTTTTTTTTGCTGTGGGCGCCAAACAGGTCTCAAAGCTGCTGCCGTG
ACCGGTTGTTTGTCCTCGGGAGCGGTGTACTACTTCACCAAATTCTCGCC
ATGGTGAGGCACCGCTTATTGCGTGGTCGCTGTGGTTGAGGGGTTGCCTT
GAACTATCTTTCCGCCGGTTTAATAGTCTTCAGGGGGCATTTAAATAAAC
ATATTCTCCGCACTGGGGGCAAAGCAGCATGAATGAGGGCATTCACGCTG
GCTTCGCGTTTTCGCTATTCTAGCATTCAGAAGTCTCTGTATCGCACCCT
TCAATCTTCCCAATTCATTCATATACGTTCCTCTCTCTTTTCCTATTTGG
AGATAAAGATTTACCTGAGGAGAGGAGGATGAAAGGTTTTTTTTTTGCGA
GTAAGATCCTGGTTCTGTCTATACTTGACCCTTTCAGCGCCTCTTGGCCA
TTTTCCGGCGTTCCTTATCCATCCTCGAGAGCTCGTCGTGCTCTAGGAGC
GTCTGAATCCGTAGTTAGCGGTGGAGGGCTGGTTTAATATTTGACTATTA
CTGAATCCACAATTGAGGCCACCAAAGCGACAAAAACCAGCTCCCCTTGC
ACGTGAGATACAGTATTAAAATCTCGAATGAGATGGACTGTAAGAGGTCA
TAGCTTGTTGCCTTTTCGGTGTTTCACACTTGACCTTCCGAAATCCAAGC
TGACTGTTCTTTGCATTGCTCTCATTCGCTAATTCGCCCTTCTACTGAGG
CCTGTGCCAAAAGAGGCGGTTTGTTTTTAGTAACGTTTTCTGGGGGGGGG
GGGGGTTAGGCCTTGTAGCTTCGAGGAACGAAGATACAAAATCGTTGCGA
AGAATACGACTTTTTTATGTGATTTAAAAAGATGACATGCACAGTATCCA
GTTAACGTCGGATAAATCAAAATTGTGACTTGTCGAACGTACCTTTGACC
AATCGTAAAATACTTTTTCGTACTTCTGCATCTTCACTGTTCCTGTAACG
TTTTCTCAAAAGTCCCGAAGACTTTTTTCAAAATGAAATGGTCGTTGATA
CCAACATTAGTCAAGAACATGTCAATGGTTGGAAAGCATAGCGACTGAGC
AAGACCAAGGCCCCAACGCGTCCACCGTAGACGGTGAATTGCAAATGGGT
GACTTATGGAATATATCACTTCCCGTCGTGAGAGTGAGAGATTCACTGTG
CCCGGCACAACAAAGATAGGACGGGCAGTGGCTCTTGATCAACTAAGCAC
GATGAACTTGGTTTTTGGCAGAACCAGACCACTTCGAAATTGCAACTTGA
CGCGGATGAACCGTCGAAAACAGCACACCTTGTAATCGCAACTTGACGTT
AAATGCTGTAGCTTCCCCAATATAAAACAGATTCGCGTGAAACATTTGTA
GGCGTGTCCAGCTGAGCAAGTTTCTATCGCCTGAGCTATTATAGTGCACC
TAGACTCTTTTCTCTATGCGTGTTGGTTGGGGCTCTGTGCGATTACAGTG
TGTTTCAAGCATTTTCTATTTTCCAAATTGATCAACTGAACCCTGTGTAA
CGGCCATGTTCGGGACAGATTTCGACGTTAGCAGAAACAAGTCGTTTTCT
CGAACATTAGAGTTCGTTTTTCTGTGCCTTAATAAGGTACGACCTTTGCA
ACATATTTTTCACGACGCCTCCCGTCGTTTCTTATAGGCGTGGAAAATAT
GCGTTGGTAGGTTGATTATTTTTAACATCATTTCTCCGAGGCTTTTCTCA
CATTATCCTCATATGAGCGGGTTTACGGATGGTCATTCAAGACTTTCGCC
CTGTTCGCGGTTGGTCATGTGAAAGAAACATCCTTGTTTGTCGTTAAACT
CGATGTTCTCGAGAATGGAGACAATCGAGTTCGGAAATCGCACATCCATG
TACGGTAGAGATATAGACGATTTACCTTTTCCAACGGCACAACTTTCGGT
GTCTTTGCAAAAAGAAAATCCGAGCAAAGTAGTTGTTCAAGAAAAACGAG
TCAGAAAAAAAAGAAGAGTTCACATGACGGGGCAGTACACATATATAATG
TTTTACATGACCATGTTATGGGGACAGTGGGTTGGTGTTCGGTCATGTAA
GAAATGCCGGTCATATGAAACCGTTCGCAAGTTTCAAGTTTCCAACGCTC
AATACCACGTACGACGGATGTTTCCATTTGTTTTTTGTTAAAAGAAAATC
GGACGCGCCCAAGATGGGGTGCCATCTCGTTCGAAACGTGCCCAAGAATC
GACGCCCCATTCGGCAGAGTATTCACTTCGGGCTGAATTTTTCGTTGGTT
TAGTACCCCCTCAACATATGTTTTTGGTCGTAGTCCTTGAGGTTGAGGAA
GGGTATAACAGTACAGGTGCTGCTACACAGCGATTGAGAAGCTGTATAAC
AGCTACCTCTTGCAAGAAGTCTTGGTTACTTCCATCAATTCCACCGCTCA
AATGCCTCATGTTTATCAAGGTGAAAAAAAGAAATGGTTACGCCGGTTGT
ACAAAACGACAAGCGATTTTCAACCTTTCGCCCAGAGATGACGACCGTGG
ATATCTCGAGCTCCTACCGATGCTCAAGCTATGCCACTTGGCACAAGAAT
ACACTTCGTCGCTAGGGTCCATTTGCACCTACGATCAGGCACCCTAAGAC
AGGATCTGAAGCACTTTGGGACATGATACACATCACCTAGGTCGACCCTT
AAGGTCGTAGCATAAATCATTTTGCGCTTCTGCGCGCTGACAACTGTGCA
TGGGAGCTTTGCAGAGCACCCGGAACTGTCTCGGTCACACTTTCATGTCT
CGAGATATTGTGAACTGTTCTTTCACTGATGCAACATAATAAACACGATG
ATTACGTTCATCTGCCTGCGACCGGGAAGCTCAAGTCCCTGCGTCTTGTG
CTGCACGCGTACTGTTTGTTCTTTGTGGTTAATACTGTAGCAGTCGCTAC
CCGATTTGTTGTGTGTTTGGTAGATACTGGTACTTTGCAAGACACAAGCC
GCTATTGTTGCAGTATATGTCAGCCATGCTCGGTGCAGTTGGTACTAAAG
GTAGGTCAACGAAGACGGGAGCATGCGTTTTGAAATACTTTCGAATTTGG
ATCAAGTCGTTAAATCAGCTTGTTTAATCGATTTGCGTCAAAACTATTGC
AGCATTAAAGCTCATGATATCGAGCGCACAATAATTTCTTTACTGCTATT
TGTATAGTTATAGCCATACCTTCACCGCCGTAGTCTCCCGCAACACCTCG
TTGCCAGTTTACCAGGTGGTGGTACACACCGCAACGAACATATCTTCCTG
CTTGAGTTGTCGCACACAAGTTCATTATGTCCCCAAACTTGAGCAGTGCT
ACGCACTCTATCCAGGGAAAACTGTTCAAATATGTTTCGAAGTCGCGTAA
GCTCACTGGGTAATATATTTTAGTCTCCTGAAATGTGAGCAAAAAATCCC
GAATCCAGGGCCAAAAACGTAAAATGTTTTTTGGGGTGTTTGATATTCTT
CGTCACTATCCTGCATTTGTACGTCCCGTTAAGTTCTGGGGCAAGTTACA
GATTTTAGGAAAAGTATTAGGTGTTCGTGACGACACGACGTAAACCCCCT
CGTTTTTTCCATTTCCCGCAACATCGCGTGCAATGTTCCCGCACCTTTTC
CGCAAACATTGAGCTCGCTATCGCGATTTCGATTTTTCGGCGAAATGGAG
GAAGAAAACGGGATAAATGGCCTCCATCTGGCTCGGCCCAGTGTTCCTAA
TCCCATCGATCTAGGCTGAGAAGCCTCTAACTGGTGGTCCAGCAGAAAAG
GTTCAGAATTGTGCTCAGAATTAAACATCGCGAGAAACACAGCCCTATTC
ATGACACCAAATATTCCACACATCCAATAGATGAAATTTGTACGTTTTTG
AGTATTCAGCGTTTTACACACGTGGCACAAAAATAGCTCCTTGTCGCTGT
CGAACTCCGTGGTGAACTGGGTACAGCATTCCTGGTTGATTGAACAGAGC
AGCTAGAACGCTTGCTCGTGCCGAGAAACTGGACATGACAGCGCGGTCTG
TTCTTGAACGTGTTCTAGAACGGTACATCAACGTCGCTATATTTGATTTT
TCTGTTGTTTTTTGTTCTGTCGGACGTGTGAAACATCCTCACAATCACAA
GAGACGGGCAAAACGATTTCGCAAGTTCTCCTTTGCTAGGAGAAACGTTC
GGGTAGTTCTACTGTCCAAGCATTCAGCAGTCAAAGCACTCGAGTGCTCC
CCCCGCAGGCGGTGTGGATATGTGGGCCCAGGCGGCTGATGCGTTTAATG
GATTTTACCCTACAAGTAGACAAGAAGAGTAGGCACAAATATACATTGGT
ATTTTTTGTATCACGGCGTCGCTTGGGGCTCGGGCGTTATGTCATTCACG
CGAGCAACCGGATTCCGGCCGCATGACCTGCTGAAAATCCCATCGTAGAT
AATGACGCTACTACGACTGAACTGACAAAAATAATGTGGGGTAGTTGCCA
GCTTGGAGCAATTCTACGTTGTCTAAAACCCACCTCCCGCCTTCTCCCTC
CGCCCCCCGCTGTTCTGTTGTTCGTGCAATTTAATATCTCCGCCCAAGGT
TCAAACGGTCTACTAACGTCAGTGCCAAAGTGGCTCTCGCGATTTCGCCC
TTTTTCCTTGCTTGTAAGTAATTTCTTGAAATAAAGGGAAACGGGGTGCA
TGCTCATGTCGAAACCCGACATGTTCAAAATATGTGCCATTATTGCCTCA
ACGCGATCGTACTCAGTTCACTGGCAGGACATTTCTACAGCACGGCTGAT
GCCGTTTTCGCGTGCTCCCAACTCTGACTTGCCTTACTGGCAAGTGTTGT
TCAGCTCAAAAGTATTCATATATGCCGTGTTTTGGAAGGCTGGCGTGCAT
TGCTCGGTTATATTTTTTCTTGGATTGAAGTAGTCGGAATGGTTGAGCAA
AGTCAGAGTGTTCAGCGGATTCGAGCGGTTGGAAAAGTTAGCCTATCCTT
GTCATCAATTGCGCTGTTTCAGTGTCGTGTTACAACAAGTTGGACTTTTA
TACTGAATTAAGACCTTCTTGGATGCCCATGTTCAGTATTAAAAATACAA
GTGATAGCAGCACAGAAGTCGGATTTATTGGGCAGTGAAGACGAGCGCGT
GTGGTCGGTTGGGTCGGTAACAAAATCCTTGATTCAACGGCATTTAGCGT
GGCGTATTTAGGCTTCTGAATTTGTCCTGGCGGATTCAAGTGTACTGGTC
AATGAGTACAAGGTTAAGTGTTTATGTCAAGAGGTCTGCACACCATTACC
CCCAGTCGTCATACTTCCTGTATCGCAACATGACTCATTGCACCGGACAT
CGCCTTCTTTTGCCCTCGTCCACTTGTGCAGATCACCTCAGGGCAGAGTT
AATCGTGATCGGTGCCAACAAAGACCCACTCGCGTATGGGATTATCTCTC
CGGGCGACAGCGCCTCTGATGTTCTCTCGAAAGAAGCGGAAGGAGCGAAG
CATCTCAGGAGCAGACTCTACCCGCACCAGCGTCTGGCTAACTGGTTCTA
TCAGCACCCCTTTCAGATGATAAGTAAGTGCCGTGATGTCCAACATATTT
CCTCCAGTAGGGTCTTGGATTTTTCTTGCTCCCGCTTGCATGCCAGGTTT
CATGACTTGGGCGACTCTGTCGCTGGAAGATAGCTTTGAGTGGCACCTTC
GGTCACACGAGGGGTTGTCGTTTTATGTTTAGGGTGAATACCACGTGTTG
TATCATTTGAAACCGCTTGTTGCACCTACGGATGCACGAATCCGCTTGTG
TTGTTGTCCTGTGCCACTAGTATCGTTGAACCTTTTTGCGTTTGTCGTTA
GTCGCACGCCGGCACTGATTGCCTACCGCCGTGTGCTAGGAGGCACCTGG
CAGGGGTATATTACTGTTCGTACCTCGTATCGTTTTCCAGCTATGCAGAT
ATCAGAGGAGACGATCCATATCTGGTAGATTTGGTTCCACCTTCATGCAA
GCATGTGATAAAGAATGCAATCTCAATCCTAGCGCTGTTGTATCTATTCC
TTGCACTTGTACTTCAAGGAGCAAGCGGCAGGGAGCGCTTACGCTATATT
CATATGTATCTCACCTCGCACCCTAGGCATCGAGCAGGCAGGAAGGCTTA
CAGCTCATACGTCCCAATGTTTTCCCTGCGTCCGCGATACCGCTGTGTCT
GCAGTTGGTATGGGTGTTCCGACCGTGGGGTCAATCTTGTATTCCACACG
TAACGAGACCCATCTAAAGCTCAGCCAGAAGCTCATGCACACCCGAGTCT
ACGGCCAGATGTCCGTCGTAGCGATGCTGCTCACCGTCATGAGCTTCCGA
GAATACATGAGGAGAAATGGGGGGCTATTCATCGATGAATACGAGGAGGA
AACGACGGCGGAACAAGATGCGGTGGTGGCAGCGTTAAGCCACCAACAAC
ACCGTAAGGTCTAGACATGAGCGGGGATTCACAATATTGCAGTATTCGTT
TTGTGTTTTTGGCTCTTGACTGATGTGCGATGTGGTTGTAGCTGAGCTAT
GCTGTATGGCCACGTTCACGTAAGAAGTGATTTCTGCTGCTGGTTACGTG
TCTGGATTCGTGGGAACGATTCGCTGGCTATGACTACAAGATACTATTTT
GCGCGTTGTTTCTGTCTATGCAAAAACGTGCAGACACTTCAGCAGGTCAC
GTTGGTTTGAGGGCCTTGTAGTGTATTATTTTTTTCTGCCTTGGACGGTT
CAAGATTTTCAACAGGTACGGTACCGTAGGTAGTTGACAGCTGTTACTGC
CTGCTTCTCAATTTGTGTTTCGATTTTGCGTGCATGCTGGAGATTCCTCT
GGTTTCTCTGGCGCTCTGAACACGAAAACGATCGTACAGTCAGTAGGGCT
CGGTCGAATGGATCTGGCCGAGCTTGCGTAGACGATTCTGCGATCGACTA
CTCAACCACAGGACGTGGAACTGCCCTAATTCACGAGGCGTCGCACATCT
TGGTACTACCTCTGTACACAACCGATGGCGTACAGATCGGGCGTGTAAAG
TATCCGAACCGGCTCTGCAGGTTAATCGGCGATGTTAGACATGCCCAGAC
TGGGGCACAACAAGAATATTCGAAGAATTACCGTAAGCCCGTGCATGAAC
GAAGGGAAAAAAACGAAAAAACAAAAAAACGAATAAACAAGATTGTCTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig605:6490..14239+

>mRNA_H-paniculata_contig605.13730.1 ID=mRNA_H-paniculata_contig605.13730.1|Name=mRNA_H-paniculata_contig605.13730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig605:6490..14239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCACCTACAAGGCCTGACGGAATCTGACAAGCGCGATCGAGTGCT
TGACTTGGCACAAAAAGAAGATGGCTCACCTACAAGGCCTGACGGAATCT
GACAAGCGCGATCGAGTGCTTGACTTGGCACAAAAAGAAGGTCTCAAAGC
TGCTGCCGTGACCGGTTGTTTGTCCTCGGGAGCGGTGTACTACTTCACCA
AATTCTCGCCATGGTCTCAAAGCTGCTGCCGTGACCGGTTGTTTGTCCTC
GGGAGCGGTGTACTACTTCACCAAATTCTCGCCATGGTTCAAACGGTCTA
CTAACGTCAGTGCCAAAGTGGCTCTCGCGATTTCGCCCTTTTTCCTTGCT
TGTTCAAACGGTCTACTAACGTCAGTGCCAAAGTGGCTCTCGCGATTTCG
CCCTTTTTCCTTGCTTATCACCTCAGGGCAGAGTTAATCGTGATCGGTGC
CAACAAAGACCCACTCGCGTATGGGATTATCTCTCCGGGCGACAGCGCCT
CTGATGTTCTCTCGAAAGAAGCGGAAGGAGCGAAGCATCTCAGGAGCAGA
CTCTACCCGCACCAGCGTCTGGCTAACTGGTTCTATCAGCACCCCTTTCA
GATGATAAATCACCTCAGGGCAGAGTTAATCGTGATCGGTGCCAACAAAG
ACCCACTCGCGTATGGGATTATCTCTCCGGGCGACAGCGCCTCTGATGTT
CTCTCGAAAGAAGCGGAAGGAGCGAAGCATCTCAGGAGCAGACTCTACCC
GCACCAGCGTCTGGCTAACTGGTTCTATCAGCACCCCTTTCAGATGATAA
TTGGTATGGGTGTTCCGACCGTGGGGTCAATCTTGTATTCCACACGTAAC
GAGACCCATCTAAAGCTCAGCCAGAAGCTCATGCACACCCGAGTCTACGG
CCAGATGTCCGTCGTAGCGATGCTGCTCACCGTCATGAGCTTCCGAGAAT
ACATGAGGAGAAATGGGGGGCTATTCATCGATGAATACGAGGAGGAAACG
ACGGCGGAACAAGATGCGGTGGTGGCAGCGTTAAGCCACCAACAACACCG
TAAGGTCTAGTTGGTATGGGTGTTCCGACCGTGGGGTCAATCTTGTATTC
CACACGTAACGAGACCCATCTAAAGCTCAGCCAGAAGCTCATGCACACCC
GAGTCTACGGCCAGATGTCCGTCGTAGCGATGCTGCTCACCGTCATGAGC
TTCCGAGAATACATGAGGAGAAATGGGGGGCTATTCATCGATGAATACGA
GGAGGAAACGACGGCGGAACAAGATGCGGTGGTGGCAGCGTTAAGCCACC
AACAACACCGTAAGGTCTAG
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