prot_H-paniculata_contig60462.13725.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60462.13725.1
Unique Nameprot_H-paniculata_contig60462.13725.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 8.520e-21
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDVSG 117
            +YGLKQ+GR W     +  V N G  Q ++DPCVFR     V+ MI+ + VDD +VA     C+ L A+L+ +F T   GE +W+  CAI RD+  G ++I+Q T++D ++ RFDV  
Sbjct:  310 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQS 426          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A6H5LQZ7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQZ7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.070e-17
Identity = 55/183 (30.05%), Postives = 85/183 (46.45%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFD----------------------------VSGHIDVRYHFSRELIARKVLRVDYKKGEDQPADILTKPL 154
            +YGLKQ+GR W     +  + N G  Q  +DPCVFR      +  ++ + VDD ++     +   + A+L+ +F     GE  WY G  I  D+  G+ +++Q  ++ ++I  F+                             S HIDVRYHF REL     +  +Y   E+Q AD+LTK L
Sbjct:  546 LYGLKQSGREWGFEAADALIAN-GYEQCRADPCVFRRMVGAEVVGLIVIYVDDILLVASEQERQEVLASLQKKFPVKDLGECTWYDGIGIEMDLENGIAKLSQTAYIGSIIKWFNRLTSGAKIKVLEDNKGALALVQNPFSSATSKHIDVRYHFIRELFKSGKITAEYVPTEEQYADMLTKVL 727          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A4S4LR26_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LR26_9AGAM)

HSP 1 Score: 75.5 bits (184), Expect = 5.320e-13
Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKC-DSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFD 114
            +YGLKQ+GR W ++L  I ++++G  + + D  VF   K   L +++ V+VDD  +A  ++   D   A LR   + T  GEL W LG  I RD   G + + QR+++D+++ RF+
Sbjct:  224 LYGLKQSGRHWYQKLTSIFMDSMGFARCQVDQAVFHKHKDEELTIVV-VHVDDCTIAATTISLIDDFKARLREHVEVTDLGELHWLLGIEIKRDRDAGTIHLCQRSYIDSILRRFN 338          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL)

HSP 1 Score: 72.4 bits (176), Expect = 6.920e-12
Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAA-LRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDV 115
            +YGLKQ+GR W +RLVEI    +  T+SE D  VF    RG   +I+ V+VDD  +A  +V+    F   +R   + T  GEL W LG  + RD     + ++Q++++++++ R+++
Sbjct:  829 LYGLKQSGRRWYQRLVEILCGKLAFTRSEVDQAVFFKVVRGGQLVIVVVHVDDCTIAASTVQLVREFKNDVRKHVEITDLGELHWLLGIEVRRDRDAKTLALSQKSYIESILRRYNL 945          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 72.4 bits (176), Expect = 7.050e-12
Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDV 115
            +YGLKQAGR W + L    + N+G T+  +D  VF  ++ G   +I+  +VDD  + G S   D+    ++  F+ +  G+L W LG  + RD     + I+QR+++DT++ RF++
Sbjct: 1179 LYGLKQAGRGWYKTLTAA-MENMGFTRCVADHAVF-YKREGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNL 1292          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A4Y9XN50_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XN50_9AGAM)

HSP 1 Score: 71.6 bits (174), Expect = 1.260e-11
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVF-RLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQ--TTRGELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDV 115
            +YGLKQ+GR W ++L  I V+ +G+ + + D  VF R ++   L  I+ V+VDD  +A  S +    F A   EF   T  GEL W LG  + RD     + ++Q +++D++I RF++
Sbjct:  634 LYGLKQSGRRWYQKLTWIFVDRLGLVRCQVDQAVFYRRDESSTL--IVAVHVDDCTIAATSKELVESFKAKVREFVEVTDLGELHWLLGIEVKRDRDARTIHLSQHSYIDSIIRRFNL 749          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A6H5J853_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J853_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 4.100e-11
Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   42 VLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQTT-RGELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDVSG 117
            V+ MI+ + VDD +VAG    C  L A+L  EF T   GE +W+ GCAI RD+  G ++I+Q T++ +++ RFDV  
Sbjct:    5 VVVMIIVIYVDDVLVAGSDKDCKELLASLNKEFPTKILGECEWFDGCAIERDVEAGTLKISQTTYIASMVKRFDVQS 81          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: D3IVT9_PHYED (Putative retrotransposon protein n=1 Tax=Phyllostachys edulis TaxID=38705 RepID=D3IVT9_PHYED)

HSP 1 Score: 70.1 bits (170), Expect = 4.440e-11
Identity = 40/119 (33.61%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKC-DSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDVSG 117
            +YGLKQA R+W+ R  E  +   G  +++ +PCV+ ++  G   +IL + VDD ++ G  +   +S+ A+L+  F     GE  + LG  I+RD  R ++ ++Q T++D V+IRF++  
Sbjct:  940 IYGLKQASRSWNIRFDE-EIKRFGFVKNKEEPCVY-MKVSGSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQN 1056          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 69.3 bits (168), Expect = 8.490e-11
Identity = 39/116 (33.62%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFDV 115
            +YGLKQAGR W + L    +  +G T+  +D  VF  ++ G   +I+  +VDD  +AG S   ++  A ++  F+ +  G L W LG  + RD     + I+QR+++DT + RF++
Sbjct: 1962 LYGLKQAGRGWYKTLTAAMLQ-MGFTRCVADHAVF-YKREGESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNL 2075          
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Match: A0A4S4L9R3_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L9R3_9AGAM)

HSP 1 Score: 68.6 bits (166), Expect = 1.520e-10
Identity = 37/116 (31.90%), Postives = 65/116 (56.03%), Query Frame = 0
Query:    1 MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVNVDDAIVAGKSVKC-DSLFAALRAEFQTTR-GELKWYLGCAIWRDIVRGVVRITQRTFVDTVIIRFD 114
            +YGLKQ G+ W ++L  I V+++G  + + D  VF   +   L +++ ++VDD  +    +   D   A LR   + T  GEL W LG  I RD   G + + QR+++++++ RF+
Sbjct:  921 LYGLKQFGQRWYQKLTSIFVDSMGFVRCQVDQAVFHKHQDAELTIVV-IHVDDCTITVTMISLIDDFKARLRKHVEVTDLGELHWLLGIEIKRDRDAGTIHLCQRSYINSILCRFN 1035          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60462.13725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLS1_9PHAE8.520e-2141.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LQZ7_9PHAE2.070e-1730.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4LR26_9AGAM5.320e-1335.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A165BJT7_EXIGL6.920e-1235.04Uncharacterized protein (Fragment) n=2 Tax=Exidia ... [more]
A0A2G8RWY5_9APHY7.050e-1233.62Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A4Y9XN50_9AGAM1.260e-1135.59Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J853_9PHAE4.100e-1142.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
D3IVT9_PHYED4.440e-1133.61Putative retrotransposon protein n=1 Tax=Phyllosta... [more]
A0A2G8RW53_9APHY8.490e-1133.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4L9R3_9AGAM1.520e-1031.90Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..117
e-value: 8.0E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60462contigH-paniculata_contig60462:18..539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60462.13725.1mRNA_H-paniculata_contig60462.13725.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60462 12..539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60462.13725.1 ID=prot_H-paniculata_contig60462.13725.1|Name=mRNA_H-paniculata_contig60462.13725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
MYGLKQAGRTWSERLVEIPVNNVGMTQSESDPCVFRLEKRGVLDMILCVN
VDDAIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAIWRDIVRGVVRI
TQRTFVDTVIIRFDVSGHIDVRYHFSRELIARKVLRVDYKKGEDQPADIL
TKPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2