prot_H-paniculata_contig6044.13722.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6044.13722.1
Unique Nameprot_H-paniculata_contig6044.13722.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length429
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6044.13722.1 vs. uniprot
Match: A0A6H5JVW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW2_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.380e-5
Identity = 78/126 (61.90%), Postives = 90/126 (71.43%), Query Frame = 0 
Query:  274 TSDTGLVXXXXXXXXXXXTGANSPGTLTLKSGDDSTTATLSSSLDLASSGNIAXXXXXXXXXXXXXXXXXXXXXXXXSFISLSGSPLKGWDLGTGSISAGIGTAGIPATATINSIVGVLTRGFSAD 399
            TSD  LVXXXXXXXXX   GAN PGTLTL+SGD +TTATL+S  DL+SSG I     XXXXXXXXXXXXXXXXXXXX     + S L+GWD+ T +I   +GT     TA INSIVG  TR ++A+
Sbjct:  844 TSDASLVXXXXXXXXXGNAGAN-PGTLTLESGDGTTTATLASEFDLSSSGGI--DLVXXXXXXXXXXXXXXXXXXXXXXXXXAASTLQGWDMATATIDEPVGTQ----TAIINSIVGSYTRKWTAN 962
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6044.13722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVW2_9PHAE1.380e-561.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6044contigH-paniculata_contig6044:6078..7420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6044.13722.1mRNA_H-paniculata_contig6044.13722.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6044 5890..7781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6044.13722.1 ID=prot_H-paniculata_contig6044.13722.1|Name=mRNA_H-paniculata_contig6044.13722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=429bp
MVSFSSGASTLGNSGAVMIGSGTATTGAGGLLSLTVGLGDSGAGGSLELV
AGESTATSAGTGGSVTIHSGSGTATSSGSVTIQSVDAGSGGSGGVSGAVT
FSSGTATSGNSGALLLGSGTSTGGRGGGVSLTVGSGSSGVGGGISIVAGE
SSAASSSGGSIEITGGLASSGAGGAVQVIGGTGASTTGGEITITSGSGSA
TTSGALSIQSAPGGLLGSSGTMDFISGTTSAGNSGAVIIGSGTALGGGGG
ALSLTVGQGDSGVGGAVAITAGSTSDTGLVGGAITIASGSNTGANSPGTL
TLKSGDDSTTATLSSSLDLASSGNIAITTTDSSSITITSADALDLVSASS
SFISLSGSPLKGWDLGTGSISAGIGTAGIPATATINSIVGVLTRGFSADA
LGLTDYVTIYNSFIAANEVVLATYSRAS*
back to top