mRNA_H-paniculata_contig60429.13720.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig60429.13720.1
Unique NamemRNA_H-paniculata_contig60429.13720.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: ATPB_FUCVE (ATP synthase subunit beta, chloroplastic n=207 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_FUCVE)

HSP 1 Score: 575 bits (1483), Expect = 2.460e-204
Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFKN 897
            GGVSVFGGVGERTREGNDLYMEMKESGVINEK+LLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLE+TIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTF N
Sbjct:  178 GGVSVFGGVGERTREGNDLYMEMKESGVINEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLESTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFNN 476
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A0H5BN74_9PHAE (ATP synthase subunit beta (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0H5BN74_9PHAE)

HSP 1 Score: 543 bits (1400), Expect = 3.940e-194
Identity = 279/282 (98.94%), Postives = 281/282 (99.65%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY 846
            GGVSVFGGVGERTREGNDLYMEMKESGVINE +LL+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY
Sbjct:   40 GGVSVFGGVGERTREGNDLYMEMKESGVINETNLLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY 321
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A2Z5XCN2_9PHAE (ATP synthase subunit beta (Fragment) n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A2Z5XCN2_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 6.780e-194
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAF 843
            GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAF
Sbjct:  104 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAF 384
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A0H5B5R8_9PHAE (ATP synthase subunit beta (Fragment) n=10 Tax=Stramenopiles TaxID=33634 RepID=A0A0H5B5R8_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 2.980e-192
Identity = 278/282 (98.58%), Postives = 280/282 (99.29%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY 846
            GGVSVFGGVGERTREGNDLYMEMKESGVINE +LL+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY
Sbjct:  101 GGVSVFGGVGERTREGNDLYMEMKESGVINEANLLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY 382
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA)

HSP 1 Score: 544 bits (1402), Expect = 5.150e-192
Identity = 279/298 (93.62%), Postives = 289/298 (96.98%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFK 894
            GGVSVFGGVGERTREGNDLYMEMKESGVI E +L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMIL G+LD+LPEQ+FYLVGDINEAI+KA+T +
Sbjct:  178 GGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILSGDLDELPEQSFYLVGDINEAIAKAETLQ 475
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: ATPB_DICDH (ATP synthase subunit beta, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_DICDH)

HSP 1 Score: 543 bits (1398), Expect = 2.490e-191
Identity = 281/299 (93.98%), Postives = 286/299 (95.65%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFKN 897
            GGVSVFGGVGERTREGNDLYMEMKESGVINE +L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDIN+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP+IVG EHY TAQLVK+TLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMIL GELD     AFYLVGDINEAI+KAKT  N
Sbjct:  183 GGVSVFGGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILNGELDVYQSIAFYLVGDINEAIAKAKTITN 481
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A0H5B5S8_9PHAE (ATP synthase subunit beta (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A0H5B5S8_9PHAE)

HSP 1 Score: 533 bits (1373), Expect = 4.110e-190
Identity = 275/282 (97.52%), Postives = 277/282 (98.23%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFY 846
            GGVSVFGGVGE TREGNDLYMEMKESGVINE +LLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGID LSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMIL GELD+LPEQAFY
Sbjct:   34 GGVSVFGGVGEITREGNDLYMEMKESGVINEANLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDXLSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILSGELDELPEQAFY 315
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A7T7IGP2_9STRA (ATP synthase subunit beta n=1 Tax=Nematochrysopsis sessilis var. vectensis TaxID=2797601 RepID=A0A7T7IGP2_9STRA)

HSP 1 Score: 536 bits (1380), Expect = 1.140e-188
Identity = 276/298 (92.62%), Postives = 283/298 (94.97%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFK 894
            GGVSVFGGVGERTREGNDLYMEMKESGVI E +L ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMGALQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ  IVGDEHY TAQLVKETLQRYKELQDIIAILGIDELSEEDRLVV RARKIERFLSQPFFVAE+FTGSPGKYV LE TIKGF M+LGGELDDLPEQAFYLVGDINE I+KA T K
Sbjct:  177 GGVSVFGGVGERTREGNDLYMEMKESGVIKENNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRAIVGDEHYDTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVARARKIERFLSQPFFVAEIFTGSPGKYVSLEETIKGFLMVLGGELDDLPEQAFYLVGDINEVIAKAATLK 474
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A7U0KT49_OLILU (ATP synthase subunit beta n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KT49_OLILU)

HSP 1 Score: 533 bits (1374), Expect = 8.680e-188
Identity = 275/298 (92.28%), Postives = 285/298 (95.64%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFK 894
            GGVSVFGGVGERTREGNDLYMEMKESGVINEK+L ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMGALQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG EHYK AQ VK+TLQRYKELQDIIAILGIDELSE DRL+V RARKIERFLSQPFFVAEVFTGSPGKYV L++TIKGFNMIL GELD+LPEQAFYLVGDINEAI KA++ K
Sbjct:  176 GGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGAEHYKIAQDVKQTLQRYKELQDIIAILGIDELSESDRLIVARARKIERFLSQPFFVAEVFTGSPGKYVSLKDTIKGFNMILNGELDELPEQAFYLVGDINEAIEKAESLK 473
[Close]
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Match: A0A514CQ01_9STRA (ATP synthase subunit beta, chloroplastic n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CQ01_9STRA)

HSP 1 Score: 530 bits (1364), Expect = 3.190e-186
Identity = 274/299 (91.64%), Postives = 279/299 (93.31%), Query Frame = 1 
Query:    1 GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTGSPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFKN 897
            GGVSVFGGVGERTREGNDLYMEMKESGVINE SL +SKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLA+KGIYPAVDPLDSTSTMLQP IVGDEHY  AQ VKETLQRYKELQDIIAILGIDELSEEDR VV RARKIERFLSQPFFVAEVFTGSPGKYV LE T KGF MIL GELDDLPEQAFYLVGDINEAI KA   K+
Sbjct:  178 GGVSVFGGVGERTREGNDLYMEMKESGVINETSLKDSKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAIVGDEHYAVAQRVKETLQRYKELQDIIAILGIDELSEEDRQVVSRARKIERFLSQPFFVAEVFTGSPGKYVSLEETKKGFTMILDGELDDLPEQAFYLVGDINEAIEKADKLKS 476
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60429.13720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATPB_FUCVE2.460e-20499.00ATP synthase subunit beta, chloroplastic n=207 Tax... [more]
A0A0H5BN74_9PHAE3.940e-19498.94ATP synthase subunit beta (Fragment) n=3 Tax=Eukar... [more]
A0A2Z5XCN2_9PHAE6.780e-194100.00ATP synthase subunit beta (Fragment) n=5 Tax=Ochro... [more]
A0A0H5B5R8_9PHAE2.980e-19298.58ATP synthase subunit beta (Fragment) n=10 Tax=Stra... [more]
A0A7S6U9Y1_9STRA5.150e-19293.62ATP synthase subunit beta, chloroplastic n=2 Tax=S... [more]
ATPB_DICDH2.490e-19193.98ATP synthase subunit beta, chloroplastic n=3 Tax=P... [more]
A0A0H5B5S8_9PHAE4.110e-19097.52ATP synthase subunit beta (Fragment) n=2 Tax=Ochro... [more]
A0A7T7IGP2_9STRA1.140e-18892.62ATP synthase subunit beta n=1 Tax=Nematochrysopsis... [more]
A0A7U0KT49_OLILU8.680e-18892.28ATP synthase subunit beta n=1 Tax=Olisthodiscus lu... [more]
A0A514CQ01_9STRA3.190e-18691.64ATP synthase subunit beta, chloroplastic n=1 Tax=R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60429contigH-paniculata_contig60429:47..946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score580.9
Seed ortholog evalue3.5e-163
Seed eggNOG ortholog2880.D1J7B4
Preferred nameatpB
KEGG koko:K02112,ko:K02114,ko:K02133
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
Hectar predicted targeting categoryother localisation
GOsGO:0000275,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0008270,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009814,GO:0009817,GO:0009987,GO:0010035,GO:0010038,GO:0010287,GO:0010319,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031977,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045087,GO:0045259,GO:0045261,GO:0045267,GO:0046034,GO:0046390,GO:0046483,GO:0046689,GO:0046872,GO:0046914,GO:0046933,GO:0050832,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055035,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098542,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
EggNOG free text desc.proton-transporting ATP synthase activity, rotational mechanism
EggNOG OGsCOG0055@1,KOG1350@2759
EC3.6.3.14
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Exons1
Model size900
Cds size900
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930672.8091085-CDS-H-paniculata_contig60429:46..9461622930672.8091085-CDS-H-paniculata_contig60429:46..946Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig60429 47..946 -
1691481400.2706542-CDS-H-paniculata_contig60429:46..9461691481400.2706542-CDS-H-paniculata_contig60429:46..946Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig60429 47..946 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60429.13720.1prot_H-paniculata_contig60429.13720.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig60429 47..946 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig60429.13720.1

>prot_H-paniculata_contig60429.13720.1 ID=prot_H-paniculata_contig60429.13720.1|Name=mRNA_H-paniculata_contig60429.13720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
GGVSVFGGVGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPP
GARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMP
SAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTF
AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKE
TLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVFTG
SPGKYVDLENTIKGFNMILGGELDDLPEQAFYLVGDINEAISKAKTFKN*
back to top

mRNA from alignment at H-paniculata_contig60429:47..946-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig60429.13720.1 ID=mRNA_H-paniculata_contig60429.13720.1|Name=mRNA_H-paniculata_contig60429.13720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=900bp|location=Sequence derived from alignment at H-paniculata_contig60429:47..946- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGGTGTTTCCGTTTTTGGTGGGGTAGGCGAAAGAACACGTGAAGGGAA
TGATTTATATATGGAAATGAAAGAATCAGGTGTAATCAATGAAAAAAGCT
TATTAGAATCTAAAGTAGCTTTAGTTTATGGGCAGATGAATGAGCCGCCT
GGTGCACGTATGCGTGTTGGATTGACTGCATTAACAATGGCTGAATATTT
CCGTGATATTAATAAGCAAGATGTTTTATTATTTATTGATAACATTTTTA
GATTTGTACAAGCTGGATCAGAGGTTTCAGCATTATTAGGTCGTATGCCT
TCAGCCGTAGGATACCAACCAACACTAGGTACTGAGATGGGTGCTTTACA
AGAACGTATCACTTCAACTAATCAAGGCTCAATAACTTCTATTCAAGCTG
TTTATGTACCAGCAGATGATTTAACTGATCCAGCCCCAGCAACTACTTTT
GCCCATTTAGATGCGACAACAGTATTATCAAGAGGACTAGCAGCTAAAGG
TATATATCCAGCAGTAGATCCTTTAGATTCAACTTCAACTATGTTACAAC
CTTTAATTGTCGGAGATGAGCATTATAAAACAGCTCAACTAGTTAAAGAA
ACTCTACAACGTTACAAAGAATTACAAGATATTATTGCTATTTTAGGAAT
TGATGAATTATCTGAGGAAGACCGTTTAGTTGTAGATCGTGCTCGAAAAA
TTGAAAGATTTTTATCACAACCATTCTTTGTTGCAGAAGTATTTACTGGT
TCACCGGGTAAATATGTAGACCTGGAAAATACAATTAAAGGCTTCAATAT
GATTTTAGGTGGAGAATTAGATGATTTACCTGAACAAGCTTTTTATTTAG
TTGGTGACATCAATGAAGCAATCTCTAAAGCAAAAACTTTTAAAAATTAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig60429:47..946-

>mRNA_H-paniculata_contig60429.13720.1 ID=mRNA_H-paniculata_contig60429.13720.1|Name=mRNA_H-paniculata_contig60429.13720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig60429:47..946- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGGTGTTTCCGTTTTTGGTGGGGTAGGCGAAAGAACACGTGAAGGGAA
TGATTTATATATGGAAATGAAAGAATCAGGTGTAATCAATGAAAAAAGCT
TATTAGAATCTAAAGTAGCTTTAGTTTATGGGCAGATGAATGAGCCGCCT
GGTGCACGTATGCGTGTTGGATTGACTGCATTAACAATGGCTGAATATTT
CCGTGATATTAATAAGCAAGATGTTTTATTATTTATTGATAACATTTTTA
GATTTGTACAAGCTGGATCAGAGGTTTCAGCATTATTAGGTCGTATGCCT
TCAGCCGTAGGATACCAACCAACACTAGGTACTGAGATGGGTGCTTTACA
AGAACGTATCACTTCAACTAATCAAGGCTCAATAACTTCTATTCAAGCTG
TTTATGTACCAGCAGATGATTTAACTGATCCAGCCCCAGCAACTACTTTT
GCCCATTTAGATGCGACAACAGTATTATCAAGAGGACTAGCAGCTAAAGG
TATATATCCAGCAGTAGATCCTTTAGATTCAACTTCAACTATGTTACAAC
CTTTAATTGTCGGAGATGAGCATTATAAAACAGCTCAACTAGTTAAAGAA
ACTCTACAACGTTACAAAGAATTACAAGATATTATTGCTATTTTAGGAAT
TGATGAATTATCTGAGGAAGACCGTTTAGTTGTAGATCGTGCTCGAAAAA
TTGAAAGATTTTTATCACAACCATTCTTTGTTGCAGAAGTATTTACTGGT
TCACCGGGTAAATATGTAGACCTGGAAAATACAATTAAAGGCTTCAATAT
GATTTTAGGTGGAGAATTAGATGATTTACCTGAACAAGCTTTTTATTTAG
TTGGTGACATCAATGAAGCAATCTCTAAAGCAAAAACTTTTAAAAATTAA
GGTGGTGTTTCCGTTTTTGGTGGGGTAGGCGAAAGAACACGTGAAGGGAA
TGATTTATATATGGAAATGAAAGAATCAGGTGTAATCAATGAAAAAAGCT
TATTAGAATCTAAAGTAGCTTTAGTTTATGGGCAGATGAATGAGCCGCCT
GGTGCACGTATGCGTGTTGGATTGACTGCATTAACAATGGCTGAATATTT
CCGTGATATTAATAAGCAAGATGTTTTATTATTTATTGATAACATTTTTA
GATTTGTACAAGCTGGATCAGAGGTTTCAGCATTATTAGGTCGTATGCCT
TCAGCCGTAGGATACCAACCAACACTAGGTACTGAGATGGGTGCTTTACA
AGAACGTATCACTTCAACTAATCAAGGCTCAATAACTTCTATTCAAGCTG
TTTATGTACCAGCAGATGATTTAACTGATCCAGCCCCAGCAACTACTTTT
GCCCATTTAGATGCGACAACAGTATTATCAAGAGGACTAGCAGCTAAAGG
TATATATCCAGCAGTAGATCCTTTAGATTCAACTTCAACTATGTTACAAC
CTTTAATTGTCGGAGATGAGCATTATAAAACAGCTCAACTAGTTAAAGAA
ACTCTACAACGTTACAAAGAATTACAAGATATTATTGCTATTTTAGGAAT
TGATGAATTATCTGAGGAAGACCGTTTAGTTGTAGATCGTGCTCGAAAAA
TTGAAAGATTTTTATCACAACCATTCTTTGTTGCAGAAGTATTTACTGGT
TCACCGGGTAAATATGTAGACCTGGAAAATACAATTAAAGGCTTCAATAT
GATTTTAGGTGGAGAATTAGATGATTTACCTGAACAAGCTTTTTATTTAG
TTGGTGACATCAATGAAGCAATCTCTAAAGCAAAAACTTTTAAAAATTAA
back to top