prot_H-paniculata_contig6042.13719.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6042.13719.1
Unique Nameprot_H-paniculata_contig6042.13719.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A6H5L508_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L508_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 2.790e-81
Identity = 143/241 (59.34%), Postives = 169/241 (70.12%), Query Frame = 0
Query:    9 YFRVPRLVRGLVGTHVVSVCCGSNFTLVVDSDGVAHSFGWNEGDALGR--HGVYDPSPRPVPSLPPIIGISAGSTHSCAITGVGPALGRHLCSLVDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDR------LPTVALCLEHATADTVRLLVFYLYTDEIPSDGVSGEMLGTLGGLAKELLLPRLEGLCVERLPYSIRRRWV 241
            YFRVPR V GLVGTH+VSV CGSNFTL VD DG+ HSFGWNEGDALGR   G YDP+P  +PS+P ++ ++AGS H  A+   GPA+GRHL  L+     DSA+VELL PDAA RG+ GVP HM ++S RCPYL GHIEAA K SS+        AA   NEN           V LCLEHA+A++V LL  YLY DE+PSD  SG+ L  L  LA ELLLPRLEGL V++LPYS+RRR+V
Sbjct:  438 YFRVPRTVNGLVGTHIVSVHCGSNFTLAVDRDGLTHSFGWNEGDALGRGWEGGYDPAPGRIPSIPRVVSVAAGSRHGVAVAAEGPAVGRHLRPLIGAV--DSADVELLTPDAASRGEPGVPAHMSVISARCPYLLGHIEAARKTSSAC-------AAAATNENGADNDGGASKRVVLCLEHASAESVPLLARYLYADELPSDATSGKTLEALARLANELLLPRLEGLSVQKLPYSLRRRYV 669          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A024U0W1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0W1_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.020e-10
Identity = 70/232 (30.17%), Postives = 101/232 (43.53%), Query Frame = 0
Query:   10 FRVPRLVRGLVGTH-VVSVCCGSNFTLVVDSDGVAHSFGWNEGDALG-RHGVYDPSPRPVPSLP--PIIGISAGSTHSCAITGV--GPALGRHLCSLVDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTVALC---LEHATADTVRLLVFYLYTDEIPSDGVSGEMLGTLGGLAKELLLPRLEGLCVERL 232
            F VPR  + L  T  +VSVCCGS++TL    DG  +S+GWN    LG  H +   +P+P+  L    I  + AG   S AI      P   R    +V   +    ++ L  P A +       VH   +  RCPYL G+  AA            V AA Q    D +P V +    L    +  ++ ++ YLYTD +    ++   +  +  +AK   LP L   C  RL
Sbjct:  351 FFVPRKQQTLATTAPIVSVCCGSHYTLATGRDGRLYSWGWNTYGVLGVGHFLTTTAPQPIDKLNGYTIARVMAGCNQSGAIVDCMGAPHAMRFRRLIVGDHSSKRYDLALTVPTAVKSS----LVHWVFLKARCPYLFGYCRAA------------VAAAPQLCGADHVPVVQVHFPDLPMLDSPVLKAILVYLYTDRLD---IAIHKVAAVKEVAKVFALPFLMAQCDMRL 563          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A6G0X363_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X363_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.110e-9
Identity = 64/201 (31.84%), Postives = 89/201 (44.28%), Query Frame = 0
Query:    5 DVHGYFRVPRLVRGLVGTHVVSVCCGSNFTLVVDSDGVAHSFGWNEGDALGR-HGVYDPSPRPVPSLPP--IIGISAGSTHSCAITG-VGPALGRHLCSLVDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTVALCLEHATADT--VRLLVFYLYTDEI 199
            D   YF +PR    L    +VSVCCGS+FTL    DG  +S+GWN    LG  H +   +P+ V SL    +  I AG   S AI   VG     +  SLV       +++ L  P    +     PVH   +  RCP+L G++ +A+              A  A E D    VAL       D   ++ ++ YLYTD +
Sbjct:  348 DPREYF-IPRQQMSLADVPMVSVCCGSHFTLSTSRDGKIYSWGWNSFGVLGLGHFLTTTAPQWVESLNGYNVTRIMAGYNQSGAIVQYVGSPHAMNFRSLVIAETTKMSDITLTLP----KTKVVFPVHKLFLKARCPFLYGYVRSAV--------------ASMAEEEDS-SVVALHFPDLPLDAPVLKAVLTYLYTDRL 528          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A024TZ06_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZ06_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.430e-9
Identity = 62/199 (31.16%), Postives = 88/199 (44.22%), Query Frame = 0
Query:   10 FRVPRLVRGLVGTH-VVSVCCGSNFTLVVDSDGVAHSFGWNEGDALG-RHGVYDPSPRPVPSLP--PIIGISAGSTHSCAITGV--GPALGRHLCSLVDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTVALC---LEHATADTVRLLVFYLYTDEI 199
            F VPR  + L  T  +VSVCCGS++TL    DG  +S+GWN    LG  H +   +P+P+  L    I  + AG   S AI      P   R    +V   +    ++ L  P A +       VH   +  RCPYL G+  AA            V AA Q    D +P V +    L    +  ++ ++ YLYTD +
Sbjct:  351 FFVPRKQQTLATTAPIVSVCCGSHYTLATGRDGRLYSWGWNTYGVLGVGHFLTTTAPQPIDKLNGYTIARVMAGCNQSGAIVDCMGAPHAMRFRRLIVGDHSSKRYDLALTVPTAVKSS----LVHWVFLKARCPYLFGYCRAA------------VAAAPQLCGADHVPVVQVHFPDLPMLDSPVLKAILVYLYTDRL 533          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A1V9ZIB6_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIB6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.310e-7
Identity = 66/228 (28.95%), Postives = 95/228 (41.67%), Query Frame = 0
Query:   24 VVSVCCGSNFTLVVDSDGVAHSFGWNEGDALGRHGVYDPSPRPVPSLPPII----GISAGSTHS------CAITGVGPALGRHLCSLVDGANDDSANVELLAPDAARRGDRG-------VPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTVALCLEHATADTVRLLVFYLYTDEIPSDGVSGEMLGTLGGLAKELLLPRLEGLCVERLPY 234
            +VSV CGS+FT+  D  GV HS+GWN    LG  G +  S     +LP ++    G+S  +T +        +   G        SL+  A+   ++V + A   + RG          VPVH   +  RCP L G++ AAL H +             A + D +   AL         ++ L+ Y+YTD I    VS   L  L  +A  L L  L   C     Y
Sbjct:  368 IVSVVCGSHFTVATDRHGVLHSWGWNAFGVLGT-GFFQGS-----TLPQVVDHLRGLSVSNTRAGYNQCGAIVQYRGLPYATGFQSLL--ASGVFSDVSVAAKGVSVRGSAAESLTLPQVPVHKVFLKARCPQLYGYVRAALAHRNE----------TAAVDLDEMGVPAL-----DGTVLKALLAYVYTDRIE---VSAHKLPALKAVADALGLADLGARCRHHRKY 569          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: A0A024TYK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYK6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.240e-7
Identity = 56/172 (32.56%), Postives = 75/172 (43.60%), Query Frame = 0
Query:   10 FRVPRLVRGLVGTH-VVSVCCGSNFTLVVDSDGVAHSFGWNEGDALG-RHGVYDPSPRPVPSLP--PIIGISAGSTHSCAITGV--GPALGRHLCSLVDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTV 175
            F VPR  + L  T  +VSVCCGS++TL    DG  +S+GWN    LG  H +   +P+P+  L    I  + AG   S AI      P   R    +V   +    ++ L  P A +       VH   +  RCPYL G+  AA            V AA Q    D +P V
Sbjct:  351 FFVPRKQQTLATTAPIVSVCCGSHYTLATGRDGRLYSWGWNTYGVLGVGHFLTTTAPQPIDKLNGYTIARVMAGCNQSGAIVDCMGAPHAMRFRRLIVGDHSSKRYDLALTVPTAVKSS----LVHWVFLKARCPYLFGYCRAA------------VAAAPQLCGADHVPVV 506          
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Match: T0QF54_SAPDV (BTB domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QF54_SAPDV)

HSP 1 Score: 59.3 bits (142), Expect = 1.890e-6
Identity = 61/217 (28.11%), Postives = 86/217 (39.63%), Query Frame = 0
Query:   24 VVSVCCGSNFTLVVDSDGVAHSFGWNEGDALGRHGVYDPSPRPVPSLPPIIGISAGSTHSCAITGVGPALGRHLCSLVD---GANDDSANVELLAPDAARRG---------DRGVPVHMCIVSVRCPYLTGHIEAALKHSSSGDSRILVGAAQQANENDRLPTVALCLEHATADTVRLLVFYLYTDEIPSDGVSGEMLGTLGGLAKELLLPRLEGLC 228
            ++SV CGS+FTL  D  GV HS+GWN    LG  G +     P P L  + G+S   T +          G +LC  +    G         LLA  A R              +P+H   +  RCP L G+I AA+ H  +    +              P   L L    A  ++ L+ Y+Y D +    ++   L  L G+A  L L  L   C
Sbjct:  378 IISVTCGSHFTLATDVHGVLHSWGWNAFGVLGT-GFFQGYTLPQP-LDHLRGLSLCHTRA----------GYNLCGAIVQYLGLPYAMGFRSLLASGAVRLQFWILPDLIMSILMPLHKVFLKARCPQLYGYIRAAVAHGDAPSGVV--------------PLEGLDLPGLDASILKALMTYVYADRLE---IAPHKLAALRGVADALGLTDLVARC 565          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6042.13719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L508_9PHAE2.790e-8159.34BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A024U0W1_9STRA1.020e-1030.17Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0X363_9STRA1.110e-931.84Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TZ06_9STRA1.430e-931.16BTB domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZIB6_9STRA1.310e-728.95Regulator of chromosome condensation (RCC1)-like p... [more]
A0A024TYK6_9STRA2.240e-732.56Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
T0QF54_SAPDV1.890e-628.11BTB domain-containing protein n=2 Tax=Saprolegnia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 104..245
e-value: 4.0E-10
score: 41.9
NoneNo IPR availablePANTHERPTHR22872BTK-BINDING PROTEIN-RELATEDcoord: 9..87
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 2..95
e-value: 4.5E-16
score: 60.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 12..87
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 40..86
e-value: 1.8E-5
score: 25.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 41..89
score: 9.258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6042contigH-paniculata_contig6042:1480..6652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6042.13719.1mRNA_H-paniculata_contig6042.13719.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6042 453..12720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6042.13719.1 ID=prot_H-paniculata_contig6042.13719.1|Name=mRNA_H-paniculata_contig6042.13719.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
MGDQDVHGYFRVPRLVRGLVGTHVVSVCCGSNFTLVVDSDGVAHSFGWNE
GDALGRHGVYDPSPRPVPSLPPIIGISAGSTHSCAITGVGPALGRHLCSL
VDGANDDSANVELLAPDAARRGDRGVPVHMCIVSVRCPYLTGHIEAALKH
SSSGDSRILVGAAQQANENDRLPTVALCLEHATADTVRLLVFYLYTDEIP
SDGVSGEMLGTLGGLAKELLLPRLEGLCVERLPYSIRRRWVEKEIMRLGW
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens