prot_H-paniculata_contig60361.13714.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig60361.13714.1
Unique Name	prot_H-paniculata_contig60361.13714.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	99

Homology

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.930e-19
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            TW GP R+V+A   HVY V++IV G  ++VHV R+R YAD+ L    D++ VF  +  QGE ++ +ILNIG + D  G Y+V V W G   +E +W+
Sbjct:   38 TWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQ 133

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.680e-17
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            TW GP R+V+A   HVY V++IV G  ++VHV R+R YAD+ L    D++ VF  +  QGE ++ +ILNIG + D  G Y+V V W G   +E +W+
Sbjct:  293 TWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQ 388

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.600e-17
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            TW GP R+V+A   HVY V++IV G  ++VHV R+R YAD+ L    D++ VF  +  QGE ++ +ILNIG + D  G Y+V V W G   +E +W+
Sbjct: 1516 TWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQ 1611

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.950e-12
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0

Query:   10 IVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            IV A   HVY V++IV G  ++VHV R+R YADA+L    +++ VF  A  QGE +++ I+++  + D  G + V VEWVG   EE++WE
Sbjct: 1602 IVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWE 1690

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5LBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBX7_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.920e-7
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNIL 70
            TW GP RIV A   HV  V++IV G  ++VHV R+R YADASL      + VF  A  Q E +++ I+
Sbjct:    2 TWTGPWRIVAAVRPHVCGVQNIVWGEDRDVHVARLRFYADASLEITAGSKDVFKHAFTQEEFEMAAIV 69

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: W2KEB9_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KEB9_PHYPR)

HSP 1 Score: 57.4 bits (137), Expect = 1.930e-7
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASL------VEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            TW GP RI+ A  AH + +E ++ GAK +VHV R++ YADASL      +E    Q++  + +     + ++++N         +Y VLV+W GL   E S+E
Sbjct:  613 TWVGPYRILRA-DAHSFLIEHLITGAKLDVHVSRLKFYADASLNVTEELLEHISAQVILLSVEKLKSHRWNDMIN---------DYEVLVQWKGLEQIEDSYE 705

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: V9EDH7_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9EDH7_PHYPR)

HSP 1 Score: 57.4 bits (137), Expect = 1.950e-7
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASL------VEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            TW GP RI+ A  AH + +E ++ GAK +VHV R++ YADASL      +E    Q++  + +     + ++++N         +Y VLV+W GL   E S+E
Sbjct:  841 TWVGPYRILRA-DAHSFLIEHLITGAKLDVHVSRLKFYADASLNVTEELLEHISAQVILLSVEKLKSHRWNDMIN---------DYEVLVQWKGLEQIEDSYE 933

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A6H5L994_9PHAE (Chromo domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L994_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.410e-6
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0

Query:   27 GAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            G  ++VHV R+R YADA+L    ++   F  A  QG  +++ I+++ ES D  G + V VEWVG   +E+ WE
Sbjct:    4 GEVRDVHVKRLRFYADAALEITAELNDDFQHAFTQGAFEMAAIVDVSESEDGPG-FDVEVEWVGFDKDENIWE 75

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: UPI001E1D2F17 (uncharacterized protein LOC123543780 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2F17)

HSP 1 Score: 53.9 bits (128), Expect = 1.460e-6
Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 0

Query:    4 WKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE 99
            W+GP R+V+  S H+Y VED++  A   +H  R+R Y DASL    ++     + Q+QG  ++  +  +  + + K  ++VLV W G    + +WE
Sbjct:   72 WRGPYRVVSTLSEHIYDVEDLLTKAVSSIHSSRLRFYHDASLEVSAELH-EHLSHQNQG-YEVRALQQLAFNAEDKI-FLVLVSWKGFEEADDTWE 164

[Close]

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Match: A0A225UQG0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQG0_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.070e-5
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0

Query:    3 TWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKDVQIVFAAAQHQGELQISNILNIGESPDKK-----GEYVVLVEWVGLGAEEHSWE 99
            TW GP +I T    H + V  +V GA  +VH+ R++ YAD SL   ++++   AA   QG      +L++GE  D +      +Y VL+ W GL   E SWE
Sbjct:  447 TWVGPYQI-TRADPHSFQVRHLVTGALTDVHLSRLKFYADISLSITEELRDHVAA---QGI-----VLSVGELKDSRWNEDTDDYEVLIGWKGLEPIEDSWE 539

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig60361.13714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5KAI3_9PHAE	9.930e-19	44.33	Chromo domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JVS6_9PHAE	2.680e-17	44.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7F6_9PHAE	3.600e-17	44.33	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A5_9PHAE	4.950e-12	43.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LBX7_9PHAE	1.920e-7	45.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
W2KEB9_PHYPR	1.930e-7	34.95	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
V9EDH7_PHYPR	1.950e-7	34.95	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
A0A6H5L994_9PHAE	1.410e-6	39.73	Chromo domain-containing protein n=2 Tax=Ectocarpu...	[more]
UPI001E1D2F17	1.460e-6	32.29	uncharacterized protein LOC123543780 n=1 Tax=Merce...	[more]
A0A225UQG0_9STRA	1.070e-5	36.27	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 64..99 score: 10.386

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig60361	contig	H-paniculata_contig60361:649..945 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig60361.13714.1	mRNA_H-paniculata_contig60361.13714.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig60361 649..945 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig60361.13714.1 ID=prot_H-paniculata_contig60361.13714.1|Name=mRNA_H-paniculata_contig60361.13714.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
VGTWKGPRRIVTAGSAHVYTVEDIVMGAKKEVHVVRMRPYADASLVEGKD
VQIVFAAAQHQGELQISNILNIGESPDKKGEYVVLVEWVGLGAEEHSWE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom