prot_H-paniculata_contig60315.13710.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60315.13710.1
Unique Nameprot_H-paniculata_contig60315.13710.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
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BLAST of mRNA_H-paniculata_contig60315.13710.1 vs. uniprot
Match: A5AIQ4_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AIQ4_VITVI)

HSP 1 Score: 53.9 bits (128), Expect = 3.860e-6
Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0 
Query:    3 WNSDTGTTDHMASDDAAFENYTPALPGTMCEIANGTLVPVEGWGRLVLLVSQPGKTSSHPP--------DTPQYNGVAERRLGLLREKPIALI 87
            W  D+G TDHM S    F  YTP+       +ANG+LV V G+  + +  +   K   H          +TPQ NGVAER+ G L +   AL+
Sbjct:   63 WIIDSGATDHMTSKSQLFHTYTPSPSNKKIAVANGSLVTVAGFEDIYIAPTLILKNVLHGGILHDSSCVNTPQQNGVAERKNGHLLDTTRALL 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60315.13710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A5AIQ4_VITVI3.860e-636.56Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60315contigH-paniculata_contig60315:332..643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60315.13710.1mRNA_H-paniculata_contig60315.13710.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60315 332..643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60315.13710.1 ID=prot_H-paniculata_contig60315.13710.1|Name=mRNA_H-paniculata_contig60315.13710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
EHWNSDTGTTDHMASDDAAFENYTPALPGTMCEIANGTLVPVEGWGRLVL
LVSQPGKTSSHPPDTPQYNGVAERRLGLLREKPIALIQDQTERDSKKLWV
GAMN
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