prot_H-paniculata_contig6030.13707.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6030.13707.1
Unique Nameprot_H-paniculata_contig6030.13707.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length606
Homology
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BLAST of mRNA_H-paniculata_contig6030.13707.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.480e-9
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0 
Query:  162 GPVFNTDDFQLVELGTGDDGRWDDYKDFSDTGSVFETASGADTAYGEDLARNFEV 216
            GP +N DDF+LVE GTGDDG WDDY D+SD   +++   GADTAY EDL    +V
Sbjct:  158 GPGYNMDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKV 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6030.13707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4S8_ECTSI4.480e-958.18DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6030contigH-paniculata_contig6030:1666..8814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6030.13707.1mRNA_H-paniculata_contig6030.13707.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6030 1665..8814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6030.13707.1 ID=prot_H-paniculata_contig6030.13707.1|Name=mRNA_H-paniculata_contig6030.13707.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp
GGWGESGRDSGTRGYGEGGGRSGRNMRPRGAGGGRDFQYNDNYGNNGRDQ
GRNSYYDGGRGTTLRRNRDEGPRRQYDDYNGDGGKGYQSRQYDGYNSDDG
RGYQSRQYDGYSGDSGRQRGNRGGGRRGRGGRGGGGAGGRGGRGRGDGNR
GGRGRSKERSTGPVFNTDDFQLVELGTGDDGRWDDYKDFSDTGSVFETAS
GADTAYGEDLARNFEVREPPPPQQQQQQQQLEGGRGSNRGDWEGADTTQR
FSKERNAGNSGGGGGSDRGEGSGGRDRRPFTPPLRMVDESKPDVIEFGDV
RPVDYLVPNARIGGASNSVDWGSNAVKGYESARNFNRERRGRGGGSGGGR
SAPRSARDIAGTGRGGQRGERFPSERRVVVDDRRGGRASNSPQPSAFVDE
EGSGWAGEAARSPSESGGSMDRISGRSDEESISGGSGSGSGDSGGRLRAR
RTYGDDQGYAQEDEKGKRGMFDNSSRNSNNGGGGGGGDSLFGDYFSADRV
EKRPFTQERFREHSPERFQERSQWSPQREAIGWADAGWGNEQQQQRQPLQ
GRRGDGRGDSVDDYGGQRPAAGRQAQGSSRGARGGDGGGGGGSDRRVDRW
DDGGAW
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