mRNA_H-paniculata_contig603.13705.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig603.13705.1 vs. uniprot
Match: D7G5H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H7_ECTSI) HSP 1 Score: 800 bits (2065), Expect = 3.970e-279 Identity = 435/780 (55.77%), Postives = 538/780 (68.97%), Query Frame = 1
Query: 1 QHADELLSAQEARGPRHGIRAFQDASVGGKRHVLMLPVNALVKGLNHVATHDPLLEGWMGVSPPELARWVQGRAGKSS--PRTLRLTYFVLVWLPIVLSFSKKTDGGRNPAIEGMNSSTMRTPGDRAYSDERPGDFQFAATSPGVSENARCVPLSFRILIYFRSRVRNKFARNIMSTLTIGLPCFGETVNHFYCVMSCYRHFSGAAYGQSVAYGLSWRGGREFWPPYIRVHTAQILVENGDAFVHHAFTSRDVERPWWWAVKGIVMRNRHLDVKGLYSHSYASEVYKSRTQILTFVESYVEDEDTEELEETIANSRTLWSLPEEYGGRDAGKGRGLAVFAIEEVNASIEIDPIEPPSAFRRVAVGEEFTEADTMMPRPFSSVDIGHFLSVMQTKSIPALVSFSLPPALSALKIFRGRQEPTSMVQYLSHPTFAIFEPNMPRVSAAA--EESQKAFTRGASVNRIGTRDKGVRWADQHSEKKP-QTVFDPLTCPNLDAFLDAVTNERQRTGAVEWSTEGEEESDWIEAVVAQLRNAKREAKKVTKAKADISQ--AVPAGXXXXXXXXXXXXXXXADAE------KEVPEWIVQQLPGLLDTLEACRHLVHGDVMTRNYEEEALPMHWTEVERLGKSDTLRDPAAVHALLARVSVSQIYACMSALAVAGGAAVPRNS--ESNSPSIEVYVVEKGVMTFTGEAESEEHFAFHALYKETTKGFSVYVTKEHPNQAAAVLWCYLKAKGMPVMMCHLTACLMDRTLDCRWD-SAHNDSIFHLAALK 2292
+HAD LLSAQEA+GP+HGIRAFQDAS GG+RHVLMLPVNALVKGLN V+ +DPLLEGWMGVSP ELAR + + R LT + +P + K G P G S + G R S++ FQF + S + P + + ++F + LP ET +M+ ++ +G A G + + RG FWPPYIRVHTA +LVENGDAFVHHAF SRDV+ PWW+++KGIVMRNRHLDVKGL+SHSYASEVYKSRTQ++TF+E+YVEDE+ ++LE I +++LW L + +D G+GR L++FAIEEV+AS+ IDPI+PP+AFRRV VGEEFTEAD ++PRPFSSVDIGHFL+VMQTKSIPALV FSLPPAL +K+FR +QEP SMVQYLSHP FA +EPNMPRV++A ++S+K+ R AS R KGVRWADQ K+ Q V D L CPNL+AFLD VTN R+RTGAVEWS EG+EE+DWIEAV+ QLR AK+ A + KA+ +++ A A + E +EVPEW+ QQLP LL LEACR L + D + R YEEEALP+HW +VE+LGKSDTL D AAVHA+ VSVSQ+YACMSALA GGA P E+ +I+VY VE+ V+TFTG AESEEH+AFH++YK+T++G VYVTKEH NQAA VLWCYLKA G+PVM+CHL CLMDR LDCRWD S + +F AALK
Sbjct: 35 EHADALLSAQEAQGPKHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKGIENRLPMLTSSLSKTIPRSAEKNMKGRAGNGPLTPGSRGS-RDSGGSRDLSEDAA--FQFGTQAVSRSPTVQRSPPRAASNRWMHQFLPSRFRDTDVDVSETDLPRRRETTTTVNPMMNVFKALAGVALGGADMDSRT-RGHPGFWPPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVKGLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRDTS-KDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALLPRPFSSVDIGHFLTVMQTKSIPALVCFSLPPALRDVKVFREKQEPISMVQYLSHPVFAEYEPNMPRVASAPGLDQSRKSIVRSASAVSPSARSKGVRWADQVVPKQEEQKVLDALECPNLEAFLDEVTNHRKRTGAVEWSAEGQEEADWIEAVLEQLRTAKKTASGIAKARNALTKNKAAAAAEQRGGGDGGFADRNVEEVEEALAKLREVPEWVTQQLPDLLRLLEACRLLSNDDELLRTYEEEALPLHWADVEKLGKSDTLHDSAAVHAVSCWVSVSQVYACMSALASGGGAGTPNAQAREAGPSTIKVYDVERQVLTFTGAAESEEHYAFHSVYKKTSEGLVVYVTKEHKNQAAGVLWCYLKAMGVPVMICHLAECLMDRALDCRWDNSPASAELFKCAALK 809 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig603.13705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig603.13705.1 >prot_H-paniculata_contig603.13705.1 ID=prot_H-paniculata_contig603.13705.1|Name=mRNA_H-paniculata_contig603.13705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=764bp QHADELLSAQEARGPRHGIRAFQDASVGGKRHVLMLPVNALVKGLNHVATback to top mRNA from alignment at H-paniculata_contig603:967..15217- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig603.13705.1 ID=mRNA_H-paniculata_contig603.13705.1|Name=mRNA_H-paniculata_contig603.13705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14251bp|location=Sequence derived from alignment at H-paniculata_contig603:967..15217- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig603:967..15217- >mRNA_H-paniculata_contig603.13705.1 ID=mRNA_H-paniculata_contig603.13705.1|Name=mRNA_H-paniculata_contig603.13705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4584bp|location=Sequence derived from alignment at H-paniculata_contig603:967..15217- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |