mRNA_H-paniculata_contig60275.13701.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig60275.13701.1
Unique NamemRNA_H-paniculata_contig60275.13701.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 3.060e-180
Identity = 258/272 (94.85%), Postives = 266/272 (97.79%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            MELL+RLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAY NPRAANGRIACANCHLAEKPVQ+ESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS+EIKEKSKGVFISPYS TQ+NILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSSFEGQVIDI+ LDKGETAITLLDS GKETKQNIPKGLSL+ISKKDNIKVDQPLTK PNV GFGQTDVE
Sbjct:    1 MELLRRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISTEIKEKSKGVFISPYSPTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIETLDKGETAITLLDSKGKETKQNIPKGLSLIISKKDNIKVDQPLTKDPNVGGFGQTDVE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: D1J7B1_ECTSI (Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J7B1_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 9.320e-175
Identity = 249/272 (91.54%), Postives = 262/272 (96.32%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            MELLKRLMKFFIISFIF+ISSIPFS++MSEAYPIYAQQ Y NPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPY+KDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSSFEGQVIDIQ L KGET +T+++S G ETKQNIPKGLS+V+SKKDNIK+DQPLTK PNV GFGQTDVE
Sbjct:    1 MELLKRLMKFFIISFIFVISSIPFSMEMSEAYPIYAQQGYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIQTLAKGETEVTMVNSKGNETKQNIPKGLSVVVSKKDNIKLDQPLTKDPNVGGFGQTDVE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 4.970e-163
Identity = 232/272 (85.29%), Postives = 254/272 (93.38%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            M+LL+RL+K   ISFI IISS    I+MS+AYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EIKEK+KGV+ISPYS+TQ+NILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSS EGQ+ ++Q L+KGETA+T+ +S GKE KQ IPKGLSLV+SKKDNIK+DQPLT+ PNV GFGQTDVE
Sbjct:    1 MQLLRRLVKILSISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKNKGVYISPYSSTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSLEGQITELQVLEKGETALTITNSQGKEIKQTIPKGLSLVVSKKDNIKLDQPLTRDPNVGGFGQTDVE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 2.870e-162
Identity = 226/272 (83.09%), Postives = 256/272 (94.12%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            M+ L+R+MKF +IS +FI SS+  S+K+S+AYPIYAQQAY NPRAANGR+ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EI++K+KGV+ISPYS+TQ+NILVVGPIAGDTHQEI FP+LSPDPATNKK+NFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSS+ GQ+IDIQ LDKGET++T+++S+GKE  Q IPKGLSLV+SKKDNIK+DQPLTK PNV GFGQTDVE
Sbjct:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIQQKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYGGQIIDIQTLDKGETSVTIINSSGKEVNQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 2.350e-161
Identity = 230/272 (84.56%), Postives = 253/272 (93.01%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            MELLKRLMKF +ISFIFIISS+  S+KMSEAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPYAKDAKQ+L NGQLSGLNVGAVVILPEGFKLAP NLIS EI+EKSKGV+ISPYS+TQ+NILVVGPIAGD +QEIIFP+LSPDPATNKKINFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSS EGQ+ +I+ L+KGET+IT++ S G E KQ IPKGLSLV+S+KD IK+DQPLTK PNV GFGQTDVE
Sbjct:    1 MELLKRLMKFIMISFIFIISSLALSVKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSNGQLSGLNVGAVVILPEGFKLAPKNLISKEIQEKSKGVYISPYSSTQDNILVVGPIAGDKNQEIIFPILSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSEGQIAEIKTLEKGETSITIIGSTGTEIKQTIPKGLSLVVSQKDTIKLDQPLTKDPNVGGFGQTDVE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A8F0F7A9_9PHAE (Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A9_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 7.120e-156
Identity = 216/272 (79.41%), Postives = 251/272 (92.28%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            M+ LK++++F +ISF FI++S  FS+ +S+AYPIYAQQAY NPRAANGRIACANCHLAEKPVQI+SPKA+LPNKVFEAAVKIPY+KDAKQILGNGQLS LNVGAVVILPEGFKLAPNNLIS EI+EK+KGV+ISPYS+TQ+NILVVGPIAGD H EIIFP+LSPDP TNKK+NFLKYPIY+GANRGRGQIYPTGEKSNNN+VTS+ +GQ+ +IQ L+KGET I++++S GKE KQ IPKGLS+VISKKDNIK+DQPLTK PNV GFGQTD+E
Sbjct:    1 MKTLKKVLQFILISFTFIVNSFTFSVAISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIDSPKAILPNKVFEAAVKIPYSKDAKQILGNGQLSSLNVGAVVILPEGFKLAPNNLISKEIQEKNKGVYISPYSSTQDNILVVGPIAGDQHPEIIFPILSPDPLTNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNVVTSNTDGQITEIQTLEKGETLISIINSQGKEVKQTIPKGLSIVISKKDNIKIDQPLTKDPNVGGFGQTDIE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: D1GJK5_FUCVE (Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJK5_FUCVE)

HSP 1 Score: 442 bits (1136), Expect = 1.670e-154
Identity = 212/272 (77.94%), Postives = 251/272 (92.28%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            M++ KR+MK F+ISF+FI S +  SI++S+AYPIYAQQ+Y NPRAANGR+ACANCHLAEKP+QIESPKAVLPNKVFE AVKIPY +DAKQILGNGQLSGLNVGAVVILPEGFKLAPN LIS EI+EK+KG++ISPYS+ Q+NILVVGP++GD H+EI FP+L+PDPATNKK+NFLKYPIY+GANRGRGQIYPTGEKSNNN++TSSFEGQ+ +IQ L+KGET IT+++SNG+E KQNIPKGLSL++S+KDNIK+DQPLTK PNV GFGQTD E
Sbjct:    1 MKICKRIMKMFMISFMFIFSFLTLSIEISQAYPIYAQQSYTNPRAANGRLACANCHLAEKPIQIESPKAVLPNKVFEVAVKIPYPQDAKQILGNGQLSGLNVGAVVILPEGFKLAPNKLISKEIQEKNKGIYISPYSSNQDNILVVGPVSGDLHKEITFPILAPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIITSSFEGQIREIQYLEKGETLITVINSNGQEIKQNIPKGLSLIVSQKDNIKLDQPLTKDPNVGGFGQTDTE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A6B9TMM8_SARFS (Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TMM8_SARFS)

HSP 1 Score: 441 bits (1134), Expect = 3.370e-154
Identity = 214/272 (78.68%), Postives = 251/272 (92.28%), Query Frame = 1
Query:    1 MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            M++LK++MK  +ISF+ I  S  FS K S+AYPIYAQQAYANPRAANGR+ACANCHLAEKP+QIESPKA+LPNKVFEAAVKIPY ++AKQILGNGQLSGLNVGAVVILPEGFKLAP+NLIS EI+EK+KGV+ISPYS+ Q+NILVVGPI+GD H+EI FP+LSPDP+TNKK+NFLKYPIY+GANRGRGQIYPTGEKSNNN+VTS FEG++ +IQALDKG+T IT+++SNG+E KQ IPKGLSL++SKKDNIK+DQPLTK PNV GFGQTD+E
Sbjct:    1 MKILKKIMKILLISFMLIHISFTFSCKDSQAYPIYAQQAYANPRAANGRLACANCHLAEKPIQIESPKAILPNKVFEAAVKIPYPREAKQILGNGQLSGLNVGAVVILPEGFKLAPSNLISKEIQEKNKGVYISPYSSNQDNILVVGPISGDLHKEINFPILSPDPSTNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSFFEGEITEIQALDKGDTLITIINSNGQELKQTIPKGLSLIVSKKDNIKLDQPLTKDPNVGGFGQTDIE 272          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 2.460e-147
Identity = 204/268 (76.12%), Postives = 239/268 (89.18%), Query Frame = 1
Query:   13 KRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
             R++K+F+++ I +ISS+  SI  SEAYPIYAQQAY NPRAANGRIACANCHLAEKP++IE+PKA+LPN VFE A+KIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAP NL++ E +EK+KGV+ISPYS+TQ+NILVVGPI G+TH EI+FP+LSPDP TNKK+NFLKYPIY+G NRGRGQIYPTGEKSNNN+VT+S EGQV +I+    GET I++ +S+GKETKQ+IPKGLSLV+SKKDNIKVDQPLTK PNV GFGQ D E
Sbjct:    6 NRILKYFLLNSILVISSLTVSITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPKNLLTKEFQEKNKGVYISPYSSTQDNILVVGPIQGETHSEIVFPILSPDPETNKKVNFLKYPIYVGGNRGRGQIYPTGEKSNNNMVTASTEGQVFEIETASNGETLISIRNSDGKETKQSIPKGLSLVVSKKDNIKVDQPLTKDPNVGGFGQMDTE 273          
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 1.060e-144
Identity = 210/269 (78.07%), Postives = 235/269 (87.36%), Query Frame = 1
Query:   10 LKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNNLVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDNIKVDQPLTKVPNVCGFGQTDVE 816
            L+  +K  I+S  F+  S  F    S+AYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPK++LPNKVF+A VKIPYAKDAKQILGNGQLS LNVGAVVILPEGFKLAP+NLIS EI+EK+KG++ISPYS++QENILVVGP++GD HQEIIFPVLSPDP TNKKINFLKYPIY+GANRGRGQIYPTGEKSNNN+VTSS+ GQV +IQ L+KGE  ITLLDS GKE KQ +PKGLSL+ISK D I VDQP+TK PNV GFGQTD E
Sbjct:    8 LETTLKIIILSCSFMSLSFGFFNYTSQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGNGQLSSLNVGAVVILPEGFKLAPSNLISREIQEKNKGIYISPYSSSQENILVVGPVSGDKHQEIIFPVLSPDPTTNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYNGQVKEIQTLEKGEIIITLLDSEGKEIKQTVPKGLSLIISKNDLITVDQPITKDPNVGGFGQTDTE 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60275.13701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7F215_9PHAE3.060e-18094.85Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=... [more]
D1J7B1_ECTSI9.320e-17591.54Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID... [more]
A0A8F0F9U7_9PHAE4.970e-16385.29Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577... [more]
A0A8F0FB28_9PHAE2.870e-16283.09Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62... [more]
A0A516ICS4_9PHAE2.350e-16184.56Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A8F0F7A9_9PHAE7.120e-15679.41Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=284... [more]
D1GJK5_FUCVE1.670e-15477.94Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1G... [more]
A0A6B9TMM8_SARFS3.370e-15478.68Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepI... [more]
A0A2I4Q308_9PHAE2.460e-14776.12Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID... [more]
A0A8E5XRH3_9PHAE1.060e-14478.07Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60275contigH-paniculata_contig60275:1..816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue2.7e-138
Seed eggNOG ortholog2880.D1J7B1
Preferred namepetA
KEGG koko:K02634
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.photosynthesis
EggNOG OGs2CMAK@1,2QPT8@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Exons1
Model size816
Cds size816
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930670.467877-CDS-H-paniculata_contig60275:0..8161622930670.467877-CDS-H-paniculata_contig60275:0..816Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig60275 1..816 -
1691481399.1642773-CDS-H-paniculata_contig60275:0..8161691481399.1642773-CDS-H-paniculata_contig60275:0..816Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig60275 1..816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60275.13701.1prot_H-paniculata_contig60275.13701.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig60275 1..816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig60275.13701.1

>prot_H-paniculata_contig60275.13701.1 ID=prot_H-paniculata_contig60275.13701.1|Name=mRNA_H-paniculata_contig60275.13701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MELLKRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYANPRAANGRI
ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGL
NVGAVVILPEGFKLAPNNLISSEIKEKSKGVFISPYSATQENILVVGPIA
GDTHQEIIFPVLSPDPATNKKINFLKYPIYIGANRGRGQIYPTGEKSNNN
LVTSSFEGQVIDIQALDKGETAITLLDSNGKETKQNIPKGLSLVISKKDN
IKVDQPLTKVPNVCGFGQTDVE
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mRNA from alignment at H-paniculata_contig60275:1..816-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig60275.13701.1 ID=mRNA_H-paniculata_contig60275.13701.1|Name=mRNA_H-paniculata_contig60275.13701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=816bp|location=Sequence derived from alignment at H-paniculata_contig60275:1..816- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACTTTTGAAAAGGCTAATGAAATTTTTCATAATAAGTTTTATTTT TATCATTAGTAGCATTCCATTTTCTATTAAAATGTCAGAGGCTTACCCAA TATATGCTCAACAAGCATATGCAAACCCTCGTGCTGCTAATGGACGAATT GCTTGTGCAAATTGTCACTTGGCAGAAAAACCTGTTCAAATAGAATCACC AAAAGCAGTATTACCAAATAAGGTCTTTGAAGCTGCTGTTAAAATTCCTT ATGCTAAAGATGCAAAACAAATTTTAGGTAACGGTCAATTAAGTGGTTTA AATGTAGGTGCGGTTGTTATATTACCAGAAGGTTTTAAACTAGCCCCGAA TAATTTAATTTCAAGCGAAATTAAAGAAAAAAGTAAAGGTGTTTTTATAT CGCCTTATAGTGCAACCCAAGAAAATATATTAGTTGTTGGGCCAATTGCT GGTGATACACATCAAGAAATTATTTTCCCTGTTTTATCACCAGACCCAGC AACTAATAAGAAAATTAATTTTTTAAAATACCCAATTTATATAGGAGCAA ATCGAGGCCGTGGCCAAATATATCCTACGGGTGAGAAAAGCAATAATAAT CTTGTAACTTCTTCATTTGAAGGACAGGTTATAGATATTCAGGCTTTAGA TAAAGGGGAAACAGCAATAACGTTATTAGATTCTAACGGAAAAGAGACTA AACAAAATATTCCAAAAGGTTTATCATTAGTTATTTCTAAAAAAGATAAT ATTAAAGTAGATCAACCTTTAACAAAAGTTCCTAATGTTTGTGGGTTTGG CCAAACAGATGTTGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig60275:1..816-

>mRNA_H-paniculata_contig60275.13701.1 ID=mRNA_H-paniculata_contig60275.13701.1|Name=mRNA_H-paniculata_contig60275.13701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig60275:1..816- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACTTTTGAAAAGGCTAATGAAATTTTTCATAATAAGTTTTATTTT
TATCATTAGTAGCATTCCATTTTCTATTAAAATGTCAGAGGCTTACCCAA
TATATGCTCAACAAGCATATGCAAACCCTCGTGCTGCTAATGGACGAATT
GCTTGTGCAAATTGTCACTTGGCAGAAAAACCTGTTCAAATAGAATCACC
AAAAGCAGTATTACCAAATAAGGTCTTTGAAGCTGCTGTTAAAATTCCTT
ATGCTAAAGATGCAAAACAAATTTTAGGTAACGGTCAATTAAGTGGTTTA
AATGTAGGTGCGGTTGTTATATTACCAGAAGGTTTTAAACTAGCCCCGAA
TAATTTAATTTCAAGCGAAATTAAAGAAAAAAGTAAAGGTGTTTTTATAT
CGCCTTATAGTGCAACCCAAGAAAATATATTAGTTGTTGGGCCAATTGCT
GGTGATACACATCAAGAAATTATTTTCCCTGTTTTATCACCAGACCCAGC
AACTAATAAGAAAATTAATTTTTTAAAATACCCAATTTATATAGGAGCAA
ATCGAGGCCGTGGCCAAATATATCCTACGGGTGAGAAAAGCAATAATAAT
CTTGTAACTTCTTCATTTGAAGGACAGGTTATAGATATTCAGGCTTTAGA
TAAAGGGGAAACAGCAATAACGTTATTAGATTCTAACGGAAAAGAGACTA
AACAAAATATTCCAAAAGGTTTATCATTAGTTATTTCTAAAAAAGATAAT
ATTAAAGTAGATCAACCTTTAACAAAAGTTCCTAATGTTTGTGGGTTTGG
CCAAACAGATGTTGAGATGGAACTTTTGAAAAGGCTAATGAAATTTTTCA
TAATAAGTTTTATTTTTATCATTAGTAGCATTCCATTTTCTATTAAAATG
TCAGAGGCTTACCCAATATATGCTCAACAAGCATATGCAAACCCTCGTGC
TGCTAATGGACGAATTGCTTGTGCAAATTGTCACTTGGCAGAAAAACCTG
TTCAAATAGAATCACCAAAAGCAGTATTACCAAATAAGGTCTTTGAAGCT
GCTGTTAAAATTCCTTATGCTAAAGATGCAAAACAAATTTTAGGTAACGG
TCAATTAAGTGGTTTAAATGTAGGTGCGGTTGTTATATTACCAGAAGGTT
TTAAACTAGCCCCGAATAATTTAATTTCAAGCGAAATTAAAGAAAAAAGT
AAAGGTGTTTTTATATCGCCTTATAGTGCAACCCAAGAAAATATATTAGT
TGTTGGGCCAATTGCTGGTGATACACATCAAGAAATTATTTTCCCTGTTT
TATCACCAGACCCAGCAACTAATAAGAAAATTAATTTTTTAAAATACCCA
ATTTATATAGGAGCAAATCGAGGCCGTGGCCAAATATATCCTACGGGTGA
GAAAAGCAATAATAATCTTGTAACTTCTTCATTTGAAGGACAGGTTATAG
ATATTCAGGCTTTAGATAAAGGGGAAACAGCAATAACGTTATTAGATTCT
AACGGAAAAGAGACTAAACAAAATATTCCAAAAGGTTTATCATTAGTTAT
TTCTAAAAAAGATAATATTAAAGTAGATCAACCTTTAACAAAAGTTCCTA
ATGTTTGTGGGTTTGGCCAAACAGATGTTGAG
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