prot_H-paniculata_contig6026.13699.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6026.13699.1
Unique Name	prot_H-paniculata_contig6026.13699.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	92

Homology

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: D8LF38_ECTSI (Divalent metal transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF38_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.110e-49
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 91
            GAYTGYQLLWVLLLAHILGL+LQSLAAR+GVVTGTHLADVCR HYDRPAALLLW MME+AIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT
Sbjct:  120 GAYTGYQLLWVLLLAHILGLVLQSLAARIGVVTGTHLADVCRTHYDRPAALLLWVMMEVAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 210

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A835YZC9_9STRA (Divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.580e-38
Identity = 68/91 (74.73%), Postives = 81/91 (89.01%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 91
            GAYTGYQL+WVLLLAH+ GL+LQS+A+RLGVVTG HLA + R++Y RPA+LLLW M E+AIIGSDIQEVLGSAI LQIL G+PLW GC++T
Sbjct:   68 GAYTGYQLIWVLLLAHMFGLLLQSMASRLGVVTGNHLAGIARLNYKRPASLLLWLMAELAIIGSDIQEVLGSAIALQILTGVPLWAGCVIT 158

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A7S2X831_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X831_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 5.150e-34
Identity = 60/89 (67.42%), Postives = 72/89 (80.90%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCL 89
            GAYTGYQLLWVL ++  +GL  Q LAARLGVVTG +LA +CR+ Y R A+L LW M E+AIIGSDIQE++GSA+  QILFG PLW+GCL
Sbjct:   65 GAYTGYQLLWVLFMSTAVGLYFQILAARLGVVTGRNLAQMCRLAYPRWASLGLWVMTELAIIGSDIQEIIGSAVAFQILFGFPLWLGCL 153

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A1V9YM96_9STRA (Metal Ion (Mn2-iron) Transporter (Nramp) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM96_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.670e-34
Identity = 64/92 (69.57%), Postives = 75/92 (81.52%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTG 92
            GAY GY+L+WVL  A +LG  LQ+LAARLGVVTG HLA+VC   Y R A+ +LW M EIAI+GSDIQEVLGSAI LQILF +PLW+GCL+TG
Sbjct:   83 GAYGGYELIWVLFGATVLGFFLQTLAARLGVVTGKHLAEVCHTMYPRWASFILWVMTEIAIVGSDIQEVLGSAIALQILFSLPLWLGCLITG 174

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A1V9ZYU6_9STRA (Metal Ion (Mn2-iron) Transporter (Nramp) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYU6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.950e-34
Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTG 92
            GAY+ YQL+WVLL A ++G  LQ+L+ARLGVVTG HLA+VCR  Y R A+ +LW M EIAI+GSDIQEVLGSAI LQILFG+PLW GCL+TG
Sbjct:  571 GAYSRYQLIWVLLGATVMGFFLQTLSARLGVVTGKHLAEVCREMYPRWASYILWIMTEIAIVGSDIQEVLGSAIALQILFGLPLWAGCLVTG 662

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A7J6RAF5_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RAF5_PEROL)

HSP 1 Score: 123 bits (309), Expect = 1.280e-33
Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 91
            GA+TGYQ+LWVLLLAHI+GLILQ L+ RL  VTG HLA+ CR  Y R  A +LW M EIAIIGSDIQEVLG+AI  ++LF IPLW G ++T
Sbjct:   91 GAFTGYQMLWVLLLAHIVGLILQVLSCRLAAVTGEHLAEHCRARYPRWTARVLWIMTEIAIIGSDIQEVLGTAIAFRVLFNIPLWAGTIIT 181

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A418EA93_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EA93_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.300e-33
Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 91
            GAY GYQL+WVLL A I+G  LQ L+ARLGVVTG +LA++C + Y R  + +LW M E+AI+GSDIQEVLGSAI LQILF +PLW+GCL+T
Sbjct:  101 GAYGGYQLIWVLLGATIMGFFLQVLSARLGVVTGKNLAEMCHLMYPRWTSRVLWFMAEVAIVGSDIQEVLGSAIALQILFKLPLWIGCLIT 191

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A5D6XI84_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI84_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.420e-33
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTG 92
            GAY GYQL+WVL  A ++G  LQ LAARLGVVTG +LA++C   Y R A+L+LW M EIAI+GSDIQEVLGSAI  Q+LFG PLWVGCL+TG
Sbjct:  106 GAYGGYQLIWVLFAATVMGFFLQVLAARLGVVTGKNLAEMCTARYPRWASLVLWIMTEIAIVGSDIQEVLGSAIAFQLLFGFPLWVGCLVTG 197

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A7J6UGL9_PEROL (Uncharacterized protein (Fragment) n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6UGL9_PEROL)

HSP 1 Score: 123 bits (308), Expect = 1.440e-32
Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 91
            GA+TGYQ+LWVLLLAHI+GLILQ L+ RL  VTG HLA+ CR  Y R  A +LW M E+AIIGSDIQEVLG+AI  ++LF IPLW G ++T
Sbjct:   91 GAFTGYQMLWVLLLAHIVGLILQVLSCRLAAVTGEHLAEHCRARYPRWTARVLWIMTEVAIIGSDIQEVLGTAIAFRVLFNIPLWAGTIIT 181

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BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Match: A0A8K1CE46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE46_PYTOL)

HSP 1 Score: 126 bits (317), Expect = 3.420e-32
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAALLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTG 92
            GAY GYQL+WVL  + ++G  LQ LAARLGVVTG +LA+VC   Y R A+L+LW M EIAIIGSDIQEVLGSAI  QILF  PLW+GCL+TG
Sbjct:   99 GAYGGYQLIWVLFASTVMGFYLQILAARLGVVTGKNLAEVCTSEYPRWASLVLWVMTEIAIIGSDIQEVLGSAIAFQILFNFPLWLGCLITG 190

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6026.13699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF38_ECTSI	1.110e-49	94.51	Divalent metal transporter n=2 Tax=Ectocarpus TaxI...	[more]
A0A835YZC9_9STRA	3.580e-38	74.73	Divalent metal transporter n=1 Tax=Tribonema minus...	[more]
A0A7S2X831_9EUKA	5.150e-34	67.42	Hypothetical protein (Fragment) n=1 Tax=Lotharella...	[more]
A0A1V9YM96_9STRA	8.670e-34	69.57	Metal Ion (Mn2-iron) Transporter (Nramp) Family n=...	[more]
A0A1V9ZYU6_9STRA	8.950e-34	70.65	Metal Ion (Mn2-iron) Transporter (Nramp) Family n=...	[more]
A0A7J6RAF5_PEROL	1.280e-33	67.03	Uncharacterized protein (Fragment) n=1 Tax=Perkins...	[more]
A0A418EA93_9STRA	5.300e-33	65.93	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A5D6XI84_9STRA	7.420e-33	68.48	Uncharacterized protein (Fragment) n=1 Tax=Pythium...	[more]
A0A7J6UGL9_PEROL	1.440e-32	65.93	Uncharacterized protein (Fragment) n=2 Tax=Perkins...	[more]
A0A8K1CE46_PYTOL	3.420e-32	68.48	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001046	NRAMP family	PRINTS	PR00447	NATRESASSCMP	coord: 81..92 score: 30.8 coord: 53..79 score: 59.85
IPR001046	NRAMP family	PFAM	PF01566	Nramp	coord: 1..92 e-value: 2.9E-34 score: 118.6
IPR001046	NRAMP family	PANTHER	PTHR11706	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	coord: 1..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 65..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 91..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 28..47
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..27
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..64
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 70..90
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..26 score: 0.504
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 69..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6026	contig	H-paniculata_contig6026:797..1072 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6026.13699.1	mRNA_H-paniculata_contig6026.13699.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6026 797..1072 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6026.13699.1 ID=prot_H-paniculata_contig6026.13699.1|Name=mRNA_H-paniculata_contig6026.13699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
GAYTGYQLLWVLLLAHILGLILQSLAARLGVVTGTHLADVCRMHYDRPAA
LLLWAMMEIAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001046	NRAMP_fam