prot_H-paniculata_contig60240.13698.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60240.13698.1
Unique Nameprot_H-paniculata_contig60240.13698.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5JRZ5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ5_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 9.280e-26
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:   65 TNTPQQTGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 123
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.450e-25
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGE++LTA YL NRSPH+ALGGATP
Sbjct:  154 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATP 212
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5KV62_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV62_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.320e-25
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVS RDGQ+LA +TRCL+KDG FP S+WGEL+LTA YL NRSPH ALGGATP
Sbjct:   91 TNTPQQIGVSGRDGQSLAEVTRCLVKDGDFPPSMWGELMLTAAYLLNRSPHLALGGATP 149
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.680e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:   66 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 124
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.890e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  200 TNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.260e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  524 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 582
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.380e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  200 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.380e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  396 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 454
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.390e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  200 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258
[Close]
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.390e-25
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:    1 TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSPHAALGGATP 59
            TNTPQQ GVSERDGQTLA +TRCL+KDG FP S+WGEL+LTA YL NRSPH+ALGGATP
Sbjct:  200 TNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60240.13698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRZ5_9PHAE9.280e-2681.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KF63_9PHAE1.450e-2579.66Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KV62_9PHAE2.320e-2577.97Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5K5H2_9PHAE2.680e-2581.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCM0_9PHAE2.890e-2581.36Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5KVF6_9PHAE3.260e-2581.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K500_9PHAE3.380e-2581.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JSL6_9PHAE3.380e-2581.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE3.390e-2581.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJR8_9PHAE3.390e-2581.36Integrase catalytic domain-containing protein n=11... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..59
e-value: 1.3E-7
score: 33.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..59
score: 8.858
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60240contigH-paniculata_contig60240:744..920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60240.13698.1mRNA_H-paniculata_contig60240.13698.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60240 744..920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60240.13698.1 ID=prot_H-paniculata_contig60240.13698.1|Name=mRNA_H-paniculata_contig60240.13698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
TNTPQQNGVSERDGQTLATITRCLMKDGRFPASLWGELLLTAVYLCNRSP
HAALGGATP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf