prot_H-paniculata_contig6016.13694.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6016.13694.1
Unique Nameprot_H-paniculata_contig6016.13694.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
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BLAST of mRNA_H-paniculata_contig6016.13694.1 vs. uniprot
Match: D8LC23_ECTSI (Glyco_transf_41 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC23_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 5.020e-26
Identity = 50/78 (64.10%), Postives = 59/78 (75.64%), Query Frame = 0 
Query:   15 RREAGKAHLAVAYWSFDYREHAMGHLTRGVFCSHKVHGRILSVLASYSRNDGSSVRRSAEECAGKFLDLYGVGDVETA 92
            RR A    L VAYWS+DYR+HAMGHLTRG+FCSH+ H R+ +V ASY  +DGS VRRSAE CAGKFLD+   G  E+A
Sbjct:  378 RRAAAGGGLVVAYWSYDYRDHAMGHLTRGLFCSHQAHNRVFAVAASYGHDDGSPVRRSAENCAGKFLDVSLAGHAESA 455
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BLAST of mRNA_H-paniculata_contig6016.13694.1 vs. uniprot
Match: A0A8K1CCR9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCR9_PYTOL)

HSP 1 Score: 53.5 bits (127), Expect = 3.580e-6
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:   23 LAVAYWSFDYREHAMGHLTRGVFCSHKVHGRILSVLASYSRNDGSSVRRSAEECAGKFLDLYGVGDVETA 92
            L +AY +FD+R+H MGHLT G+  +H    R+ S   SY  ND S  R  AE     F D+  V D+E A
Sbjct:  386 LRIAYLTFDFRDHPMGHLTLGLLDTHDS-SRVGSFCYSYGTNDASEWRLRAESQCDIFHDVAMVSDLEAA 454
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6016.13694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC23_ECTSI5.020e-2664.10Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A8K1CCR9_PYTOL3.580e-642.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11380coord: 5..93
e-value: 2.0E-9
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6016contigH-paniculata_contig6016:11331..12684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6016.13694.1mRNA_H-paniculata_contig6016.13694.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6016 11331..12684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6016.13694.1 ID=prot_H-paniculata_contig6016.13694.1|Name=mRNA_H-paniculata_contig6016.13694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
EIEKNRVWGNSGGGRREAGKAHLAVAYWSFDYREHAMGHLTRGVFCSHKV
HGRILSVLASYSRNDGSSVRRSAEECAGKFLDLYGVGDVETAM
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