mRNA_H-paniculata_contig6014.13692.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE) HSP 1 Score: 150 bits (380), Expect = 5.640e-39 Identity = 87/234 (37.18%), Postives = 136/234 (58.12%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEF---ITPKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T DI + H + A+ E + R TAK + +L G+ AC CS +KA R ++++T +R+ + + R+++DLGG I S+ Y MI+ DD++R + F+K +SDA AF F+ I P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + ++P E W+G
Sbjct: 251 TMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 482
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE) HSP 1 Score: 144 bits (362), Expect = 6.720e-38 Identity = 84/234 (35.90%), Postives = 135/234 (57.69%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T DI + H + A+ E + R TAK + +L G+ AC CS +KA R ++++T +R+ + + R++ DLGG I S+ Y +I+ DD++R + F++ KSDA +AF F+ P +++ VR++NGG+ G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + ++P E W+G
Sbjct: 31 TMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEI--VRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 262
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.800e-37 Identity = 86/232 (37.07%), Postives = 132/232 (56.90%), Query Frame = 1
Query: 7 DITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
D+ + H + A+ E + R TAK + IELTG+ AC CS +KA + + +T R+ + + R+++DLGG + S+ Y MI+ DD++R + F+K KSDA +AF F+ P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ +A +Q V G +++LW EAM++AC+ IN + S N + +P E WHG
Sbjct: 571 DVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHG 800
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.620e-37 Identity = 86/234 (36.75%), Postives = 135/234 (57.69%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T DI + H + A+ E + R TAK + +L G+ AC CS +KA R ++ +T +R+ + + R+++DLGG I S+ Y MI+ DD++R + F++ KSDA +AF F+ P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + ++P E W+G
Sbjct: 184 TMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEI--VRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 415
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.560e-36 Identity = 85/234 (36.32%), Postives = 134/234 (57.26%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T DI + H + A+ E + R TAK + +L G+ AC CS +KA R ++++T +R+ + + R+++DLGG S+ Y MI+ DD++R + F++ KSDA +AF F+ P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + + P E W+G
Sbjct: 129 TMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYG 360
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE) HSP 1 Score: 144 bits (362), Expect = 7.940e-36 Identity = 84/234 (35.90%), Postives = 130/234 (55.56%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T D+ + H + A+ + + R TAK + EL GE C CS KA + + ++T R+ + + R+++DLGG + S+ Y MI+ DD++R + F+K KSDA AF F+ P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + +P E W+G
Sbjct: 663 TMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 894
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 144 bits (362), Expect = 8.020e-36 Identity = 84/234 (35.90%), Postives = 130/234 (55.56%), Query Frame = 1
Query: 1 TQDITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
T D+ + H + A+ + + R TAK + EL GE C CS KA + + ++T R+ + + R+++DLGG + S+ Y MI+ DD++R + F+K KSDA AF F+ P +++ VR++NGGE G F EL I + TP +PQYN +AER LGL+ E +A +Q V G ++KLW EAM++AC+ +N + S N + +P E W+G
Sbjct: 370 TMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 601
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 139 bits (350), Expect = 3.230e-34 Identity = 83/232 (35.78%), Postives = 130/232 (56.03%), Query Frame = 1
Query: 7 DITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIAL-MQDLVESG------SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
D+ D H + + E + R TAK + IELTG+ AC CS KA R A+ T + + + R++++LGG + S+ Y MI+ DD++R + F++ KSDA +AF F+ P I++ VR++NGGE G F EL I + TP +P++N +AER LGL+ E +A +Q V G +++LW EAM++AC+ +N + S N + +P E W+G
Sbjct: 392 DVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYG 621
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE) HSP 1 Score: 132 bits (333), Expect = 3.640e-33 Identity = 81/228 (35.53%), Postives = 120/228 (52.63%), Query Frame = 1
Query: 7 DITDMHRLLAYPSEQITRDTAKAINIELTG-EWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFITPK-KIKVGAVRTNNGGECEGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIALMQDLVESG-----SEKLWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
D+ H + E++ + TAK ++LTG C+ CS +K + K TD R + RL+++LGG MQ S+ N Y +II DD +R + F+K KSDA AAF ++ ++ +V RT+ GGE +G F GI + TPP+TP+YN +AER LGLL + +A E S LW EA++ AC +N + T+ N +P E +HG
Sbjct: 134 DLNSDHNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHG 361
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.150e-31 Identity = 79/230 (34.35%), Postives = 122/230 (53.04%), Query Frame = 1
Query: 7 DITDMHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKRTTRVVERLYIDLGGPMQIPSLSDNSYVMIIIDDYSRLQAL*FMKKKSDATAAFMCFIDEFIT---PKKIKVGAVRTNNGGEC-EGSFDL*LYELGIMHQHTPPDTPQYNVLAERWLGLLREKTIA--LMQDLVESGSEK---LWTEAMNYACDVINMSVTSTNDNVITPNEEWHG 669
DI D H + E + R TAK L GE R C+ CS K + KT R + ++R+++DL G ++ SL Y +I+ DDY+R + F+K KSDA AF ++ E P + V VR++NGGE EG F + I + TP +P+YN +AER LGL+++ +A + + G+ LW EA+ ++C+ +N + T++N +P E WHG
Sbjct: 509 DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHG 736 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6014.13692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6014.13692.1 >prot_H-paniculata_contig6014.13692.1 ID=prot_H-paniculata_contig6014.13692.1|Name=mRNA_H-paniculata_contig6014.13692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp MHRLLAYPSEQITRDTAKAINIELTGEWRACVECSQTKAHRFAVLKKTDKback to top mRNA from alignment at H-paniculata_contig6014:10670..11338- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6014.13692.1 ID=mRNA_H-paniculata_contig6014.13692.1|Name=mRNA_H-paniculata_contig6014.13692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=669bp|location=Sequence derived from alignment at H-paniculata_contig6014:10670..11338- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6014:10670..11338- >mRNA_H-paniculata_contig6014.13692.1 ID=mRNA_H-paniculata_contig6014.13692.1|Name=mRNA_H-paniculata_contig6014.13692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at H-paniculata_contig6014:10670..11338- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |