prot_H-paniculata_contig6013.13690.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6013.13690.1
Unique Nameprot_H-paniculata_contig6013.13690.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.960e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  232 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 313          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.990e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  437 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 518          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.000e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  501 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 582          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.000e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  645 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 726          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.020e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  851 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 932          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 7.610e-18
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++  +
Sbjct:  165 MCAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAL 246          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5JKT7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-16
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVLAVI 82
            M +EFEGL+ AG F   ++ P GCNV++++W YKWK D  G I +A  R+V + + Q   VDY   F+PTA+A+S R+L  +
Sbjct:  148 MSAEFEGLLRAGTFALAEKAPLGCNVINARWVYKWKADETGKIVKAEARLVAEGFKQKHVVDYLGTFSPTANASSIRLLVAL 229          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5L6C0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.880e-12
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0
Query:   19 EVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTASATSNRVL 79
            ++PEGCNV+D++W +KWK D  G I +A  R+V K + Q  GVDY   F+PTA+A S R++
Sbjct:  216 KLPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLV 276          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 8.460e-11
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEG 60
            M +E EGL+ AG F    ++PEGCNV+D++W +KWK D  G I +   R+V K + Q  G
Sbjct:  827 MSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKTKARLVAKGFRQKHG 886          
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Match: A0A5N6LL66_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LL66_9ASTR)

HSP 1 Score: 63.9 bits (154), Expect = 5.390e-10
Identity = 36/84 (42.86%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    1 MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRMVGKEWSQLEGVDYHAIFTPTAS-ATSNRVLAVIV 83
            M  E + L   G +  V   P   NVVD KW Y+ K DPHG I R   R+V K + Q  GVDYH  F+P    AT   VL++ V
Sbjct:  300 MADELDALNRNGTWTLVPSAPH-LNVVDCKWVYRLKTDPHGNISRYKARLVAKGFHQQHGVDYHETFSPVIKPATIQTVLSIAV 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6013.13690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV80_9PHAE2.960e-1846.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LDZ0_9PHAE2.990e-1846.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE3.000e-1846.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE3.000e-1846.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K622_9PHAE3.020e-1846.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP36_9PHAE7.610e-1846.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKT7_9PHAE1.190e-1645.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6C0_9PHAE1.880e-1249.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JH25_9PHAE8.460e-1145.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5N6LL66_9ASTR5.390e-1042.86Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6013contigH-paniculata_contig6013:153..440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6013.13690.1mRNA_H-paniculata_contig6013.13690.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6013 36..452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6013.13690.1 ID=prot_H-paniculata_contig6013.13690.1|Name=mRNA_H-paniculata_contig6013.13690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
MDSEFEGLVAAGNFCEVKEVPEGCNVVDSKWGYKWKCDPHGMIDRAALRM
VGKEWSQLEGVDYHAIFTPTASATSNRVLAVIV*
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