mRNA_H-paniculata_contig6012.13689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6012.13689.1
Unique NamemRNA_H-paniculata_contig6012.13689.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A6H5KD59_9PHAE (Cysteine dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD59_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 6.340e-65
Identity = 111/197 (56.35%), Postives = 142/197 (72.08%), Query Frame = 1 
Query:  664 GDLRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRRLQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSV--HLSVTS-GFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTG---LIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWADA 1236
            GDLRL +FME+VK ELW+++A+P R+RFR+QSLLRRL TP  ETW+HAL R  ++  R FTRTLLA+++ + S+   L V + GFDL+L+CW+PGAM+ IHDHP + CW  VL G++ ETRY+ A P          G G   +++TS  T   G VTYI+DSMG HKM N S  EECISLHLY+PG+ ECTTWADA
Sbjct:  123 GDLRLVEFMEQVKMELWEFSAMPLRKRFRIQSLLRRLHTPPLETWSHALARAAEEGPRHFTRTLLARYQPTSSLPARLDVDAPGFDLLLLCWRPGAMTDIHDHPKTACW--VLTGEIKETRYALAPP-ADRGITNGNGDGGENMVQTSSVTCTPGAVTYIEDSMGLHKMENPSSTEECISLHLYSPGILECTTWADA 316
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: D7FK04_ECTSI (Cysteine dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK04_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.960e-52
Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 1 
Query:  751 VQSLLRRLQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSV--HLSVTS-GFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTG---LIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWADA 1236
            V S  RRL TP  ETW+HAL R T++  RPFTRTLLA+++ S SV   L V + GFDL+L+CW+PGA+S IHDHP + CW  VL G++ ETRYS A P       + +G G   +++TS  T   G VTYI+DSMG HKM N S  EECISLHLY+PG+ ECTTWADA
Sbjct:    3 VCSCCRRLHTPPLETWSHALARSTEEGPRPFTRTLLARYQPSSSVPERLDVDAPGFDLLLLCWRPGAVSDIHDHPKAACW--VLTGEIKETRYSLAPP-ADRGITSGDGDGGGNMVQTSSVTCTPGAVTYIEDSMGLHKMENPSSTEECISLHLYSPGILECTTWADA 167
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BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A8K1CM57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM57_PYTOL)

HSP 1 Score: 115 bits (289), Expect = 7.190e-27
Identity = 66/190 (34.74%), Postives = 100/190 (52.63%), Query Frame = 1 
Query:  670 LRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRR--LQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWAD 1233
            + L + +E ++  L +   +P + + ++Q+LL    +   + + +AH       D  R +TR L++    +          + LML+CW  G  SPIHDHP+ GCWVK +QG V+E RY               G  L+ETS+     G VTY+DDS+GFHK+GN  E  + I++HLYAP   +C  W D
Sbjct:    8 MTLANLVESIETLLLEEPEVPLKDKLKIQTLLEAYPVNMHELKPFAHF------DPSRNYTRNLISTDHET----------YALMLICWNRGKYSPIHDHPSDGCWVKCIQGHVNEVRYER------------RGERLVETSNIVLTDG-VTYMDDSLGFHKVGNPREDMDSITMHLYAPPYEKCRIWFD 168
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BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: K3WU71_GLOUD (Cysteine dioxygenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU71_GLOUD)

HSP 1 Score: 115 bits (289), Expect = 1.240e-26
Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 1 
Query:  676 LGDFMEEVKAELWQYNA---IPFRRRFRVQSLLRR--LQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWAD 1233
            L + ++ ++AEL+  +A   +P  ++  +Q+LL R  +   + + +AH       D  R +TR L++    +          + LML+CW  G  SPIHDHP+ GCWVKV+QG V+E RY              +G+ L+ET++    +G VTY+DDS+G HK+GN     + I++HLY+P   +C  W D
Sbjct:   28 LEELVDAIEAELFDNDAQKHLPLHKKSDLQALLERFPVNMDELKQFAHF------DPSRNYTRNLISTDHET----------YALMLLCWNRGKYSPIHDHPSDGCWVKVIQGHVNEVRYQK------------QGSKLVETANTVLTSG-VTYMDDSLGLHKVGNPHAEIDAITMHLYSPPYEKCRVWFD 189
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: W4GMB8_9STRA (Cysteine dioxygenase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMB8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.240e-26
Identity = 66/187 (35.29%), Postives = 98/187 (52.41%), Query Frame = 1 
Query:  670 LRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRRLQTPKFETWAHALKRPTD-DSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTW 1227
            L L + ++ +++E  +   +P  ++  +++ L       F   ++ LKR    D  R +TR L+A    +          + LML+CW  G  SPIHDHP+ GCWV+ +QG V E RY               GT L +TS  T   G VTY+DDS+G HK+GN S++ + I+LHLYAP   +C  W
Sbjct:   21 LTLRELVDVIESEFERQERLPLNKKDDIKNAL-----AAFNVDSNELKRYAHFDPSRNYTRNLIATDNAT----------YALMLLCWNKGKYSPIHDHPSDGCWVRHIQGTVHEVRYWN------------NGTSLEQTSELTISEG-VTYMDDSLGLHKIGNPSDSTDAITLHLYAPPYDKCRLW 179
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BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A662WHT7_9STRA (Cysteine dioxygenase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHT7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.110e-25
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 1 
Query:  619 PLAGPPMSSMLGMESGDLRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRR-----LQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWAD 1233
            P + PP +     +S  + L   +E ++ EL     +P + + ++Q LL       L   + + +AH       D  R +TR L++    +          + LML+CW  G  SPIHDHP  GCWVKV+QG V+E RY     +            L+ETS+    +G VTY+DDS+G HK+GN     + IS+HLYAP   +C  W D
Sbjct:   19 PSSAPPQTR--SEDSTPMDLAQLVETLERELEHGPELPIKNKPKLQQLLEYVFAAVLNMAELQQFAHF------DPSRNYTRNLISTDNET----------YALMLLCWNRGKYSPIHDHPTDGCWVKVIQGFVNEVRYQRQDGK------------LVETSNVVLTSG-VTYMDDSLGLHKVGNPHAEVDAISMHLYAPPYEKCHVWLD 197
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A6G0XKW4_9STRA (Cysteine dioxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKW4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.700e-25
Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 1 
Query:  631 PPMSSMLGMESGDLRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRR--LQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTW 1227
            P  ++   + S  L L + ++ +++E+  ++ IP  ++  +++ L    +   + + +AH       D  R +TR L+A    +          + LML+CW  G  SPIHDHP+ GCWV+ +QG V E RY               GT L E S A    G VTY+DD +G HK+GN S++E+ I+LHLYAP   +C  W
Sbjct:    3 PTTNNETVLPSKGLTLRELVDTIESEIELHDGIPLHKKDDIKAALAAYVVDMEELKRYAHF------DPSRNYTRNLIATDNET----------YALMLLCWNKGKYSPIHDHPSDGCWVRHIQGAVHEVRYRNV------------GTHLEEISQALVTEG-VTYMDDLIGLHKIGNPSDSEDAITLHLYAPPYDKCRLW 174
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A482RH41_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RH41_9ARCH)

HSP 1 Score: 112 bits (279), Expect = 2.420e-25
Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 1 
Query:  889 LSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWAD 1233
            ++    F LML+CW  G  SPIHDHP  GCW++V+ G V+ETRY      C       E   +++TS A   AG V YIDD++ FHK+GN SE E   SLHLY+P    C+ W +
Sbjct:   63 IATNEDFTLMLLCWNAGRASPIHDHPGHGCWMRVVDGSVTETRY-----RCD-----GELNKMVQTSFAQANAGDVIYIDDNIAFHKVGNPSETELAFSLHLYSPPFNSCSIWLE 167
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A6G0XHB0_9STRA (Cysteine dioxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHB0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.030e-25
Identity = 65/188 (34.57%), Postives = 97/188 (51.60%), Query Frame = 1 
Query:  670 LRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRRLQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTWAD 1233
            L L + ++ ++ E+   + IP  ++  +Q  L        +   +AL  PT    R +TR L++    S          + LM +CW  G  SPIHDHP+ GCWV+ +QG ++E RY              +G  L+ETS+    AG V+Y+DDS+G HK+GN S   + I+LHLYAP   +C  W D
Sbjct:   41 LTLQELVDVIETEIHMNDGIPLHKKKDIQGALMAFDANMDDLKRYALFDPT----RYYTRNLISTDNAS----------YALMFLCWNKGKYSPIHDHPSDGCWVRHIQGTLNEVRYWN------------DGAKLVETSNVLITAG-VSYMDDSLGLHKIGNPSTDVDAITLHLYAPPYEKCRLWFD 201
[Close]
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Match: A0A024TVA6_9STRA (Cysteine dioxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVA6_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.900e-25
Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 1 
Query:  670 LRLGDFMEEVKAELWQYNAIPFRRRFRVQSLLRRLQTP--KFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVTSGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHSAVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYAPGMGECTTW 1227
            L L + +  ++AE   +  +P  ++  ++  L  L     + + +AH       D  R +TR L+A    +          + LML+CW  G  SPIHDHP+ GCWV+ +QG V E RY               GT L +TS      G VTY+DDS+G HK+GN S+  + I+LHLYAP   +C  W
Sbjct:   19 LTLRELVHAIEAEFEHHERLPLNKKDDIKKALASLHADLDELKRYAHF------DPSRNYTRNLIATDNQT----------YALMLLCWNKGKYSPIHDHPSDGCWVRHIQGTVHEVRYWN------------NGTSLEQTSETFVSEG-VTYMDDSLGLHKIGNPSDTTDAITLHLYAPPYDKCRLW 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6012.13689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD59_9PHAE6.340e-6556.35Cysteine dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FK04_ECTSI1.960e-5256.55Cysteine dioxygenase n=1 Tax=Ectocarpus siliculosu... [more]
A0A8K1CM57_PYTOL7.190e-2734.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WU71_GLOUD1.240e-2634.55Cysteine dioxygenase n=1 Tax=Globisporangium ultim... [more]
W4GMB8_9STRA7.240e-2635.29Cysteine dioxygenase n=4 Tax=Aphanomyces astaci Ta... [more]
A0A662WHT7_9STRA1.110e-2533.81Cysteine dioxygenase n=2 Tax=Nothophytophthora sp.... [more]
A0A6G0XKW4_9STRA1.700e-2533.33Cysteine dioxygenase n=1 Tax=Aphanomyces euteiches... [more]
A0A482RH41_9ARCH2.420e-2545.22Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6G0XHB0_9STRA3.030e-2534.57Cysteine dioxygenase n=1 Tax=Aphanomyces euteiches... [more]
A0A024TVA6_9STRA4.900e-2534.57Cysteine dioxygenase n=2 Tax=Aphanomyces invadans ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6012contigH-paniculata_contig6012:240..5857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.1
Seed ortholog evalue1.3e-43
Seed eggNOG ortholog2880.D7FK04
Preferred nameCDO1
KEGG rclassRC00404
KEGG koko:K00456,ko:K05012,ko:K15711
KEGG TC2.A.49.1.1,2.A.49.1.2,2.A.49.1.3,2.A.49.2.2,2.A.49.2.3,2.A.49.2.8
KEGG ReactionR00893
KEGG Pathwayko00270,ko00430,ko01100,map00270,map00430,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0000098,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006090,GO:0006520,GO:0006534,GO:0006790,GO:0006805,GO:0006807,GO:0006810,GO:0006950,GO:0006952,GO:0006954,GO:0007275,GO:0007589,GO:0007595,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009093,GO:0009410,GO:0009636,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014074,GO:0016020,GO:0016053,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017172,GO:0019448,GO:0019450,GO:0019451,GO:0019452,GO:0019530,GO:0019694,GO:0019752,GO:0030879,GO:0031960,GO:0032501,GO:0032502,GO:0032787,GO:0033762,GO:0033993,GO:0042221,GO:0042412,GO:0042493,GO:0043167,GO:0043169,GO:0043200,GO:0043434,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045471,GO:0046305,GO:0046394,GO:0046395,GO:0046439,GO:0046677,GO:0046683,GO:0046872,GO:0046903,GO:0046914,GO:0048513,GO:0048545,GO:0048731,GO:0048732,GO:0048856,GO:0050878,GO:0050896,GO:0051179,GO:0051213,GO:0051234,GO:0051384,GO:0051591,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0097305,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901652,GO:1901698,GO:1901700
EggNOG free text desc.alkanesulfonate biosynthetic process
EggNOG OGsKOG4064@1,KOG4064@2759
EC1.13.11.20,2.3.2.27
COG Functional cat.C
BiGG ReactioniRC1080.CRv4_Au5_s3_g10641_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400,ko04040,ko04121
Exons5
Model size1252
Cds size1251
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6012.13689.1prot_H-paniculata_contig6012.13689.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6012 240..5857 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930669.0824676-CDS-H-paniculata_contig6012:239..5031622930669.0824676-CDS-H-paniculata_contig6012:239..503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 240..503 -
1691481398.536615-CDS-H-paniculata_contig6012:239..5031691481398.536615-CDS-H-paniculata_contig6012:239..503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 240..503 -
1622930669.0961618-CDS-H-paniculata_contig6012:846..10101622930669.0961618-CDS-H-paniculata_contig6012:846..1010Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 847..1010 -
1691481398.5514243-CDS-H-paniculata_contig6012:846..10101691481398.5514243-CDS-H-paniculata_contig6012:846..1010Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 847..1010 -
1622930669.1106184-CDS-H-paniculata_contig6012:1592..16481622930669.1106184-CDS-H-paniculata_contig6012:1592..1648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 1593..1648 -
1691481398.561404-CDS-H-paniculata_contig6012:1592..16481691481398.561404-CDS-H-paniculata_contig6012:1592..1648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 1593..1648 -
1622930669.1229455-CDS-H-paniculata_contig6012:4013..44531622930669.1229455-CDS-H-paniculata_contig6012:4013..4453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 4014..4453 -
1691481398.571328-CDS-H-paniculata_contig6012:4013..44531691481398.571328-CDS-H-paniculata_contig6012:4013..4453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 4014..4453 -
1622930669.136603-CDS-H-paniculata_contig6012:5530..58571622930669.136603-CDS-H-paniculata_contig6012:5530..5857Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 5531..5857 -
1691481398.584927-CDS-H-paniculata_contig6012:5530..58571691481398.584927-CDS-H-paniculata_contig6012:5530..5857Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6012 5531..5857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6012.13689.1

>prot_H-paniculata_contig6012.13689.1 ID=prot_H-paniculata_contig6012.13689.1|Name=mRNA_H-paniculata_contig6012.13689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=417bp
SPDRRHAGRSPVSRAPRARERYHRRLGRHHFGGAQMHALRSKRIRVLRRV
LFQIYLPRGRKHGRLGKSGEELLEQVASRVVGEQESDEVSQKGVLLERMK
QVISVTTQQPRLRAAAVAAAASRSLASHAHQQQSRWSADRDQAQQEFSHV
ALPPPARQAQSQTPIQASAADSTTPTTVKSSAVGVSVAVPGGDAAAADKL
DLNVTRPLAGPPMSSMLGMESGDLRLGDFMEEVKAELWQYNAIPFRRRFR
VQSLLRRLQTPKFETWAHALKRPTDDSGRPFTRTLLAKHEGSPSVHLSVT
SGFDLMLMCWKPGAMSPIHDHPNSGCWVKVLQGQVSETRYSPATPECTHS
AVAAEGTGLIETSHATYGAGTVTYIDDSMGFHKMGNASEAEECISLHLYA
PGMGECTTWADACSMG*
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mRNA from alignment at H-paniculata_contig6012:240..5857-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6012.13689.1 ID=mRNA_H-paniculata_contig6012.13689.1|Name=mRNA_H-paniculata_contig6012.13689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5618bp|location=Sequence derived from alignment at H-paniculata_contig6012:240..5857- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCCTGATCGACGTCACGCAGGCAGATCCCCAGTCAGCAGGGCACCTCG
AGCGCGGGAGCGCTACCATCGACGGCTCGGCCGCCACCACTTCGGAGGTG
CGCAAATGCATGCACTACGCTCGAAGAGAATACGTGTCCTTCGACGAGTG
TTGTTTCAAATTTACCTCCCTCGCGGTAGAAAGCATGGGCGTCTGGGAAA
GTCCGGAGAGGAGCTGCTTGAGCAGGTGGCGTCCAGGGTGGTGGGGGAAC
AGGAGAGTGACGAGGTTTCGCAGAAAGGAGTACTGCTGGAGCGGATGAAA
CAAGTCATTTCGGTGACTACACAACAGGTAGCCATCTCGAGACGGGTGCA
GAGATACAGACTGGCTCTGTGGGGAAGGCAAGAAGCAGCAGAAGGGGCTC
TCAAACCTCTAGCGTGGGGATATGGTTTAGCGACGCCGTAGTGTTCCATC
ACGGCGTTTTATCATTTTCTGATTTTACATGTGTTCTTAAGTTAGATAGA
TGAGTGATTTCACAATACCGCATGTTTTGAACTTGTAAGAGCAAGTTGTA
TATTTATAGTTCTCAAGTGAGGAACAACAGTGCTTTGCTGAAGAGGTTTT
GCTGTAGGTCAGGTATTCGAGCACAACATATGACTATTATTAGGTTTGAA
GTTTTCTTGTTTCGTCTGCCGTTCATTTTTCTTACTCTGTGAACTTACCT
TTGAAGATTCCCAACAGCCAGTTCTGAGTCTGCAATTGTCAGAAGGCAAT
GATATAGAGTAACATAATAACATATTAAAGATATATAATAAGGATACAGC
TCACAAAGGGTCTGACCCCATAAGTGTTCGAGCTCCTAGTTGAGTCAGGC
CCAACGTTTTACGTTCGGGTGCACTACTGTTTGCATACTATATAAAGTAC
AACAGTACCAGTCTATAATAGTAGTGTAATATAGTGCAATATATGTACAT
GGGCGTCGGCTATTATTATCTGGTAGTACGTACAGTAATTGGGTTGTCAT
CTTTTCTATTTTGTGTCTAACTACAAGTAGTAGTAGGATGAACACAGAAT
GGATTATGACATATTTTTGGTCCACGTTTTGTCAGAGGGCAAATAACACA
AAACTGCAGACTGCAGAACAAAATACGGTGCGCATCATCTTCATATGACG
CGCTCTGATTGGCTTAAGGATTCCTCAAGCGTTGAATGTTTAAGAATCTC
AACAACATCTTTCAACAATGGTGAGAAGAGAAATCACCCATAATTCGAGC
ACATGCCCCCACTCTTCACCAGTCACTAAACCCAAACACAAGGAGCACGG
TAGTGGATAGAGCCGGCGAGAAGCACATCACCTAGGCAAGCATAGCCTAC
AACATGACGACGTTCAGAACTGTTGTTGCCTTCGCTTCCTCTGCCACCCA
GCAGCCACGACTGCGAGCTGCTGCTGTTGCTGCTGCCGCCTCGAGATCTC
TGGCGTCCCACGCCCACCAACAGCAGAGCAGATGGTCGGCAGATCGGGAT
CAAGCCCAGCAGGAGTTCTCTCACGTAGCGCTGCCACCGCCTGCCCGCCA
AGCTCAATCCCAAACGCCGATCCAAGCCTCTGCTGCGGATAGCACCACCC
CAACTACCGTGAAAAGCTCCGCGGTGGGCGTCAGCGTGGCTGTGCCCGGT
GGTGATGCTGCTGCTGCGGACAAACTCGACCTGAATGTGACCCGCCCGCT
CGCTGGTCCGCCCATGAGCAGCATGCTCGGCATGGAGTCTGGTGACCTGA
GGCTCGGTGACTTCATGGAGGAGGTGAAGGCTGAGCTCTGGCAATATAAC
GCCATACCTTTCAGGAGGCGGTTCAGAGTACAGAGTCTGCTTCGGTGAGT
TGTGGTTCTCATGTTGTTTTTTCGTTTTCCCTCGCCTGTCTATGCACGCA
CTACACTACAGTATGCATATCATCCATGTTTTTCCTTGGGGATAAGAATT
TTATTCTGTTAGCTTCGAAGGTGTTGGAAATGTTGCCTTTGGCCGGTACA
ACATCATTGAACAAAACGGCATCCCTTGTCCTCCACGCGCGGGACCACGT
CCTCCGACCCGCGGATGTAAATTGGCTGGATTCCAGCGATACGTGCCTAT
GGGAATTGCTTCTTTACTTCCCATGAGGAAGGGTGGGAGCCTTTGGTTGA
CCTCTCATTTTTCATTAATCATTCAACATGAAGACTACCCGTTGCAGATC
TATAGACATGCAAAAGAGACAGTACAGTGATAAAGCAGTAACTGCCAAGA
TCAGTGGTGGTCACTCGGACTTTTAAGTGTATACAAATGTCGATCAGTCA
CCATCAGTCAAATGATTTGCTGACTCCACAGCACGGAGCACAAAAGCCAA
TAGACCGTGGATTGAAGATCGACCGTCGCCGCAGCCTACTATTAAGGTTG
GTGACGAGGTGATGCCCACGACAAGGAGTATATGATATCTGGGAGTAGAA
GTACGCCACAGATCTTCGACCGTGCGACTATAATCGTTTCTCTATGACAG
GCAAGCAACTGGATACCATCTCCACCACTTGTTGCATATGGGCCGTTGTT
GTTTATGCGTTGAATATGAAGTGGAAACGAAAAATCGATGAAAAATGAAC
ATATCTTTGTTGTCAACAGATGGGGGTAGGTAGTGTCAACACGACGGAAA
ATTATATCAATCTGTCCTCTGTGCACTCACAGAACATGATCGTACTGAAG
TTTTTGGCCGAGGTGTTTCCACACATTTTTATAAATCAACATGTCTTATT
TTTGTTGATCCATAATCTTCCCCAATAAATTGCAGTGGATTTTATCAAGT
GTGTCGTTGCCGCGTGGCCAGTTCAAATTGAACCTGGGGAGAGTTGAGTT
ATTTTCCCAAAATCCACGTAACAACCTGGTCCACCTCAGTATCCTCTTTT
GTCCACGGTGTCCCCAGCGATCTCCCAAGTAACAGAAAAACCGTCAAGGA
CTGCACCGACTATCGTTGGTTGCTGTTTAGATCGAAACAAACGGTGTAAA
ACAGGATCGATTTCTTAGTATGGTGAGACGAACAATTGGGTGTTTTGACA
CATAATGAAGAAGGCACTGAAGCGTCACCTGTTTTAAAATAATGAAATTA
CCGCCGCCATTCGTGTCTCCCTTTTTGAGTTGTGGAAAGCTGCGGTGGCC
GTTGATTTTATGGCAAAACTTTGACCAGATGTATGTGTGCACTTCGGCAG
AAACCCGGGCGTTCCCCGTCGCGATCGCGATCTTATAAAGAAAAAAATTA
CTCTTGTGTGTTCGGCACCGTGACCGGGCTTTACAAGCCCCGACTCTTTG
GACAGTCCGGACTCCAGAAGCTTGGGGGTCACATTCCGTAACAGCATAGA
TAGAATATTGAAATCTTTCATAACCTCAGCTTTCGTTCATGATAAGATCG
CATGCTGCATAGATTGTTGATCCATACAAGACGGTTCAGTGGTACAGGGC
ACCGTTACCGGCATACCTTCTTCCCCCCCAAAAAGAATACAGCAAAACAC
CATCCAGTCGAGCCATCTGATGAAAACATAAATATTCCTAATTGTGACCT
TCATAGTATCGTCTTTTCGACGGGTGCTCTATATGGTATATAATAGTGTG
TCTTCCAAAATGAGGTTCAACCCCGAAACTAAGATTTCCTTAACCTAAAG
TCATGGACCATTGACCTTTCTTTGGAGGGCCCGTGCCCTTCGATCGAGTT
GAAGTGTCATGACTTGAGGTTTGGGAAATCCCTTTTTGGGGTTGAAAATC
AATTTTAAGGTTGAACCTCAATTTTGCAAGACACTCTTACACTAGTACAT
CTGAACATTAATTTAATTTATTCTTGGTACTGCAGTCTACATTCCCAACC
ATTTTCCACATCAGACTTATCAACTGTGTATCGCGAGAGACACGGCCGTT
AACCCCACCATGACTGATCGCTACAGGGAGCTGCCTTCGTTTAGACAGAC
ATGTTCAGTCCATCACAGACAAGACATACAACTTGACACAAGGTAGTTAG
AACCATTAATCCTGCCCACAAACGACTGCAGCGCTCGAAATTGTTACGTG
GGTATGTTGTTTTGAAATTGGCGCCGCGGGGTTGAGTCCATGTAGGTCAA
CCATATGCTAAGCAGGAATTGCAGTAAGACTTGAGATGCGTTTTTAACCT
TGCCTCTCTTGTAAAAAATGTCGTTGTGGTTGTGGGCGCTCTTTTGTTTT
GTTTCTCAGGAGATTGCAGACGCCCAAGTTCGAGACCTGGGCTCACGCCC
TCAAGCGTCCAACAGGTGAGAACGAAACAATTTTATGATTTTTTTTACAT
ATTAAAAAAAAGAAATTTATAGAGTATCCTGCACTAGGGATATATGACTG
GCTGAAAGGATATCGGATCCATTGACCACAGCAATCACTATGACAAGGTC
TTCAACTGAAGAGATCACATTGCGCTGCCATCGCTCTCTTAGCGGCTCTT
GGTGCTATGCGTGCATCTATTAGACCACATTACACAGCCGTGCTGACAGC
ATATCGCCCCCAGAAGCACAGCGGCAGTCTTAAAAACCCAAACCTCCCAC
CACTGGTTGGTTGACTCACGTTTTGTGCGGGCGAATCCCTGTAGAAGTGT
GATGCATAGAAAACCATACCTTTTGAAACGGCCATTAGGTCAACAAACGT
ACGCAATTGGCGTGAGTCCATGTCGCCCTCCCGATGGGACTCGAGGGTGA
ACAAAAGGACGAGTATCAAATGACCTAATACGTGATATCGCGCTTGTTTC
CCTTTTTTTTCAAGTCGGACGTGAACATCAACACAACGGAGAACATGATC
TTTTTTGTAGAAGTAATTTTTTTGGCGCGGAATGTAACGAAAAACAGATG
ATTCCGGAAGGCCCTTCACGCGAACGCTGCTAGCTAAGCACGAGGGGTCT
CCATCTGTTCACCTGTCCGTGACGAGCGGATTCGACTTGATGCTCATGTG
TTGGAAGCCCGGGGCGATGTCGCCGATTCACGACCACCCAAATTCTGGCT
GCTGGGTCAAGGTGAGATTTTAGATCTGTGTTTTGAAGAAATCACTGGAG
TACTGCACATCGAAGAGTCGAAAATCTGTTTCGCAATAACGTTGACGATA
GTGAAGTCTGGTTGATATTTGTGAGATGTATTATGTTTGACGAGCTTTCG
AAGGAACTTGACAATTTGCTGTCTGCGGGATCGATCTGTCCAAGGCGATT
TTTTCTAGCGTAGGATTAATTGCCTCTACTTGTCAACAGCCACATATGAC
TCAGCAAATTGTCTGCACAGTGAACATGGTACGACAACGGACAACGTTAT
ACCGTCTCCTTCAAAAGGATTTGGTGTGCGCTTTCCCAAAACCAAAAAAT
ACAGGTACTTCAGGGGCAAGTATCGGAGACGCGGTATTCTCCCGCAACAC
CTGAGTGCACGCACTCAGCAGTCGCCGCCGAGGGTACGGGGTTGATCGAG
ACCTCACACGCTACCTACGGTGCCGGGACGGTTACGTATATCGATGACTC
CATGGGCTTCCACAAGATGGGCAACGCTAGCGAGGCTGAAGAGTGCATTT
CGTTGCACCTGTACGCTCCTGGGATGGGGGAGTGCACTACTTGGGCGGAT
GCATGTTCAATGGGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig6012:240..5857-

>mRNA_H-paniculata_contig6012.13689.1 ID=mRNA_H-paniculata_contig6012.13689.1|Name=mRNA_H-paniculata_contig6012.13689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2502bp|location=Sequence derived from alignment at H-paniculata_contig6012:240..5857- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCCTGATCGACGTCACGCAGGCAGATCCCCAGTCAGCAGGGCACCTCG
AGCGCGGGAGCGCTACCATCGACGGCTCGGCCGCCACCACTTCGGAGGTG
CGCAAATGCATGCACTACGCTCGAAGAGAATACGTGTCCTTCGACGAGTG
TTGTTTCAAATTTACCTCCCTCGCGGTAGAAAGCATGGGCGTCTGGGAAA
GTCCGGAGAGGAGCTGCTTGAGCAGGTGGCGTCCAGGGTGGTGGGGGAAC
AGGAGAGTGACGAGGTTTCGCAGAAAGGAGTACTGCTGGAGCGGATGAAA
CAAGTCATTTCGGTGACTACACAACAGTCTCCTGATCGACGTCACGCAGG
CAGATCCCCAGTCAGCAGGGCACCTCGAGCGCGGGAGCGCTACCATCGAC
GGCTCGGCCGCCACCACTTCGGAGGTGCGCAAATGCATGCACTACGCTCG
AAGAGAATACGTGTCCTTCGACGAGTGTTGTTTCAAATTTACCTCCCTCG
CGGTAGAAAGCATGGGCGTCTGGGAAAGTCCGGAGAGGAGCTGCTTGAGC
AGGTGGCGTCCAGGGTGGTGGGGGAACAGGAGAGTGACGAGGTTTCGCAG
AAAGGAGTACTGCTGGAGCGGATGAAACAAGTCATTTCGGTGACTACACA
ACAGCCACGACTGCGAGCTGCTGCTGTTGCTGCTGCCGCCTCGAGATCTC
TGGCGTCCCACGCCCACCAACAGCAGAGCAGATGGTCGGCAGATCGGGAT
CAAGCCCAGCAGGAGTTCTCTCACGTAGCGCTGCCACCGCCTGCCCGCCA
AGCTCAATCCCAAACGCCGATCCAAGCCTCTGCTGCGGATAGCACCACCC
CAACTACCGTGAAAAGCTCCGCGGTGGGCGTCAGCGTGGCTGTGCCCGGT
GGTGATGCTGCTGCTGCGGACAAACTCGACCTGAATGTGACCCGCCCGCT
CGCTGGTCCGCCCATGAGCAGCATGCTCGGCATGGAGTCTGGTGACCTGA
GGCTCGGTGACTTCATGGAGGAGGTGAAGGCTGAGCTCTGGCAATATAAC
GCCATACCTTTCAGGAGGCGGTTCAGAGTACAGAGTCTGCTTCGCCACGA
CTGCGAGCTGCTGCTGTTGCTGCTGCCGCCTCGAGATCTCTGGCGTCCCA
CGCCCACCAACAGCAGAGCAGATGGTCGGCAGATCGGGATCAAGCCCAGC
AGGAGTTCTCTCACGTAGCGCTGCCACCGCCTGCCCGCCAAGCTCAATCC
CAAACGCCGATCCAAGCCTCTGCTGCGGATAGCACCACCCCAACTACCGT
GAAAAGCTCCGCGGTGGGCGTCAGCGTGGCTGTGCCCGGTGGTGATGCTG
CTGCTGCGGACAAACTCGACCTGAATGTGACCCGCCCGCTCGCTGGTCCG
CCCATGAGCAGCATGCTCGGCATGGAGTCTGGTGACCTGAGGCTCGGTGA
CTTCATGGAGGAGGTGAAGGCTGAGCTCTGGCAATATAACGCCATACCTT
TCAGGAGGCGGTTCAGAGTACAGAGTCTGCTTCGGAGATTGCAGACGCCC
AAGTTCGAGACCTGGGCTCACGCCCTCAAGCGTCCAACAGGAGATTGCAG
ACGCCCAAGTTCGAGACCTGGGCTCACGCCCTCAAGCGTCCAACAGATGA
TTCCGGAAGGCCCTTCACGCGAACGCTGCTAGCTAAGCACGAGGGGTCTC
CATCTGTTCACCTGTCCGTGACGAGCGGATTCGACTTGATGCTCATGTGT
TGGAAGCCCGGGGCGATGTCGCCGATTCACGACCACCCAAATTCTGGCTG
CTGGGTCAAGATGATTCCGGAAGGCCCTTCACGCGAACGCTGCTAGCTAA
GCACGAGGGGTCTCCATCTGTTCACCTGTCCGTGACGAGCGGATTCGACT
TGATGCTCATGTGTTGGAAGCCCGGGGCGATGTCGCCGATTCACGACCAC
CCAAATTCTGGCTGCTGGGTCAAGGTACTTCAGGGGCAAGTATCGGAGAC
GCGGTATTCTCCCGCAACACCTGAGTGCACGCACTCAGCAGTCGCCGCCG
AGGGTACGGGGTTGATCGAGACCTCACACGCTACCTACGGTGCCGGGACG
GTTACGTATATCGATGACTCCATGGGCTTCCACAAGATGGGCAACGCTAG
CGAGGCTGAAGAGTGCATTTCGTTGCACCTGTACGCTCCTGGGATGGGGG
AGTGCACTACTTGGGCGGATGCATGTTCAATGGGGTGAGTACTTCAGGGG
CAAGTATCGGAGACGCGGTATTCTCCCGCAACACCTGAGTGCACGCACTC
AGCAGTCGCCGCCGAGGGTACGGGGTTGATCGAGACCTCACACGCTACCT
ACGGTGCCGGGACGGTTACGTATATCGATGACTCCATGGGCTTCCACAAG
ATGGGCAACGCTAGCGAGGCTGAAGAGTGCATTTCGTTGCACCTGTACGC
TCCTGGGATGGGGGAGTGCACTACTTGGGCGGATGCATGTTCAATGGGGT
GA
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