prot_H-paniculata_contig6010.13686.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6010.13686.1
Unique Nameprot_H-paniculata_contig6010.13686.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
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BLAST of mRNA_H-paniculata_contig6010.13686.1 vs. uniprot
Match: D8LQD7_ECTSI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.570e-6
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:   61 SAATTAARSVPRWITRKYVVHNLRMGGSRVIKEIQVVCSRRNNGDDMPVPAEETSQEG 118
            SAA T A     WITR YVV +LRMGGSR I+E+ +VC+RRN      +P   T +EG
Sbjct:  778 SAAATGASPSSTWITRTYVVRDLRMGGSRAIREVSLVCARRNK-----LPTLSTQEEG 830
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BLAST of mRNA_H-paniculata_contig6010.13686.1 vs. uniprot
Match: A0A6H5LAJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAJ7_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 4.810e-6
Identity = 38/96 (39.58%), Postives = 46/96 (47.92%), Query Frame = 0 
Query:   61 SAATTAARSVPRWITRKYVVHNLRMGGSRVIKEIQVVCSRRNNGDDMPVPAEETSQEGLR----LLPGRRRNADGEDRCTQRQGAGVEVAEGKRVA 152
            SAA T       WITR YVV +LRMGGSR I+E+ +VC+RR     +    E   +   R     LPG RR  D         G GV  A G+  A
Sbjct:  226 SAAATGTSLSSTWITRTYVVRDLRMGGSRAIREVSLVCARRRKSPTLSTQGEGGEKVAARSAWSALPGGRRLED--------SGGGVSNAGGRSGA 313
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6010.13686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQD7_ECTSI1.570e-651.72Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
A0A6H5LAJ7_9PHAE4.810e-639.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6010contigH-paniculata_contig6010:3383..4350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6010.13686.1mRNA_H-paniculata_contig6010.13686.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6010 3381..4350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6010.13686.1 ID=prot_H-paniculata_contig6010.13686.1|Name=mRNA_H-paniculata_contig6010.13686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
KNNLQARVSCNSQATPLQSDTTERSHLRGGGRGDSSDLEARASHDNKKTP
PPEQTSVGTPSAATTAARSVPRWITRKYVVHNLRMGGSRVIKEIQVVCSR
RNNGDDMPVPAEETSQEGLRLLPGRRRNADGEDRCTQRQGAGVEVAEGKR
VATGG
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