prot_H-paniculata_contig6009.13683.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6009.13683.1
Unique Nameprot_H-paniculata_contig6009.13683.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length259
Homology
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: D7FJM8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM8_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 4.140e-153
Identity = 235/254 (92.52%), Postives = 249/254 (98.03%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            RDVCASATTGSGKTAAF+LPILERLLYRPKKVAVTRVM++TPTRELGVQIHSMC SL+Q+TDI+ ALVVGGNKN+KAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCP GRQTLLFSATMNTKVDDLASLALNKPVRV+ASP+NSAPQRLVQEFVRIRQSRE+DREAILLSLL RTF TKTIVFFDTK+LAHRLNI+LG+AGIR+AELHGNLAMTQRLEALDR
Sbjct:  345 RDVCASATTGSGKTAAFLLPILERLLYRPKKVAVTRVMIITPTRELGVQIHSMCRSLSQFTDIACALVVGGNKNLKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPIGRQTLLFSATMNTKVDDLASLALNKPVRVKASPMNSAPQRLVQEFVRIRQSREQDREAILLSLLTRTFKTKTIVFFDTKILAHRLNIVLGIAGIRAAELHGNLAMTQRLEALDR 598          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A835YJC4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC4_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 3.000e-127
Identity = 199/258 (77.13%), Postives = 224/258 (86.82%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDRQVVG 258
            RDVCASA TGSGKTAAF+LP+LERLLYRP+  A TRVMV+TPTREL VQIHSMC +LAQ+TDI   LVVGGNKN+KAQEAELR RPDIVICTPGRM+DH+ NSA VH+DD+EILVLDEADRLLE+GF+EEV  LV+ CP+GRQT+LFSATMNTKV  L  LALNKPVRV A+P NS   RLVQEFVR+RQSRE DREAILLSLL+RTFT KTIVF+DTK  AHR  ++LGLAG+++AELHGNL MTQRLEALDR   G
Sbjct:  323 RDVCASAQTGSGKTAAFVLPMLERLLYRPRSAAATRVMVITPTRELAVQIHSMCGALAQFTDIGCCLVVGGNKNIKAQEAELRNRPDIVICTPGRMIDHVVNSACVHLDDLEILVLDEADRLLEMGFEEEVHTLVEHCPRGRQTMLFSATMNTKVQGLIKLALNKPVRVVATPPNSVNTRLVQEFVRVRQSREMDREAILLSLLSRTFTEKTIVFYDTKAQAHRALLVLGLAGLKAAELHGNLTMTQRLEALDRFKAG 580          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A7S2V390_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V390_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.670e-106
Identity = 170/256 (66.41%), Postives = 209/256 (81.64%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKG--RQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            RDVCASA TGSGKTAAF+LP+LERLLYRP++V  TRV+VV PTREL  Q  +M + LAQ+TD++ ALVVGG+KN++AQEAELRARPD+V+CTPGRMVDHLTN+ SVH+D +EIL+LDE DRLLELGFQEE+ +LV++CP+G  RQTLLFSATM+  V+ LA+L+LNKPVRVR         RLVQEFVRIR SRE+DREAI+ SL+AR F+ K +VF D K   HRL ++LGL G++  ELHGNL   QRL++L R
Sbjct:   94 RDVCASAATGSGKTAAFLLPVLERLLYRPQRVRATRVLVVCPTRELAAQGSAMLHQLAQFTDVTLALVVGGSKNLRAQEAELRARPDVVVCTPGRMVDHLTNTPSVHLDTIEILILDEVDRLLELGFQEELEQLVQACPQGLGRQTLLFSATMSMGVERLATLSLNKPVRVRVDSSYVVAPRLVQEFVRIRPSREKDREAIVASLVARNFSEKCMVFVDYKSQCHRLRLVLGLLGMKVGELHGNLTQEQRLDSLQR 349          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A7S1C375_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C375_9STRA)

HSP 1 Score: 329 bits (844), Expect = 3.830e-105
Identity = 169/253 (66.80%), Postives = 200/253 (79.05%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALD 253
            RDVC SA TGSGKTAAF+LP+LERLLYR K++A  R +V++PTREL  Q  SM   L +YTD+ S LVVGG  +VKAQEAELR RPD+VICTPGRM+DHL NS SVH+DDV+ILV+DEADRLLELGF EEV E+VK+CPKGRQTL+FSATM   VD LA ++L +PVRV A PL    QRLVQEF+R+R  RE+DREAI++SL+ R+F   TIVFF  K  AHR  I+LGLAG+   ELHGNL   QRLEAL+
Sbjct:  106 RDVCGSAETGSGKTAAFLLPVLERLLYRDKRIAAIRCVVMSPTRELASQTWSMLKELNKYTDVRSCLVVGG-LSVKAQEAELRTRPDVVICTPGRMIDHLRNSMSVHLDDVDILVMDEADRLLELGFTEEVEEVVKACPKGRQTLMFSATMTDDVDKLAKMSLKRPVRVSADPLYDLSQRLVQEFIRVRDDREDDREAIMVSLVTRSFKKGTIVFFQRKKRAHRAAILLGLAGVNVGELHGNLTQRQRLEALE 357          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A7S3PR35_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR35_9STRA)

HSP 1 Score: 324 bits (831), Expect = 4.190e-103
Identity = 164/254 (64.57%), Postives = 202/254 (79.53%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            RD+C SA TGSGKTAA++LP LERLL+RP+ V+V RV+++TPTREL  Q+ SMC  LAQ+TDI +  VVGG  N++AQ  +LR RPDIV+ TPGR++DH+ N+ SV +DDVEIL+LDEADRLLE+GF +EV E+VK CPK +QTLLFSATM T V+ LA L+LN+PVRV A PL     RLVQEFVRIR SRE DREAILL+L  RTF  +TI+FF  KV AHR+ II GL+G+++AELHGNL   QRLE+L R
Sbjct:  115 RDICGSAVTGSGKTAAYLLPTLERLLFRPRSVSVIRVLILTPTRELAQQVLSMCQKLAQFTDIEAMSVVGG-LNLQAQATQLRGRPDIVVATPGRLIDHVRNTQSVDLDDVEILILDEADRLLEMGFTDEVMEVVKFCPKSKQTLLFSATMTTSVNQLAELSLNRPVRVAADPLYDMANRLVQEFVRIRASRESDREAILLALCTRTFHKETIIFFRRKVRAHRMGIIFGLSGLKAAELHGNLTQRQRLESLQR 367          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A7S2WP83_9STRA (Hypothetical protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WP83_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.710e-102
Identity = 168/254 (66.14%), Postives = 202/254 (79.53%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            RD+C SA TGSGKTAAF+LP+LERLL+RPK++A TRV++VTPTREL  Q+ SM   LAQYTDI +A +VGG  ++  Q  ELR+RPDIV+ TPGR++DH+ N+ SV +DDVEIL+LDEADRLLELGF +EV ELVK CPK RQTLLFSATM T V+ LA L+LN+PVRV+A PL     RLVQEFVRIR SRE DREA+LL+L  R+F +K IVFF  K  AHR+ II GL G+++AELHGNL   QRLEAL R
Sbjct:  261 RDICGSAVTGSGKTAAFVLPVLERLLFRPKRIAATRVLIVTPTRELTQQVLSMLEKLAQYTDIKAAGIVGG-LSMSMQAMELRSRPDIVVATPGRLIDHVRNTQSVDLDDVEILILDEADRLLELGFMDEVMELVKFCPKSRQTLLFSATMTTSVNQLAELSLNRPVRVQADPLYDMAARLVQEFVRIRPSRERDREAMLLALCTRSFKSKVIVFFSRKHHAHRMGIIFGLCGLKAAELHGNLTQRQRLEALQR 513          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: M4BEJ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEJ4_HYAAE)

HSP 1 Score: 318 bits (815), Expect = 4.810e-102
Identity = 164/254 (64.57%), Postives = 198/254 (77.95%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            +D+CASA TGSGKTAAF+LPILERL +R ++V  TRVM++ P REL  Q  SM   LA++TDI+ +L VGG   +K QEAELR RPD+V+CTPGRM+DHL NS SVHMDD+EILVLDEADRLLELGF +EV ELV+ CP  RQT+LFSATM +KVD L  L++ +PVR+   PL    + LVQEFVRIR +RE+DREAILL+L  RTF T TIVF +TK  AHR+ II GLAGI++AELHGNL    RLEAL +
Sbjct:   27 KDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITISLAVGGLP-LKVQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTDEVLELVRMCPVQRQTMLFSATMTSKVDQLIGLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLLQRDRLEALQK 279          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: D0N9A9_PHYIT (DEAD/DEAH box RNA helicase, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0N9A9_PHYIT)

HSP 1 Score: 321 bits (822), Expect = 1.510e-101
Identity = 165/254 (64.96%), Postives = 200/254 (78.74%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            +D+CASA TGSGKTAAF+LPILERL +R ++V  TRVM++ P REL  Q  SM   LA++TDI+ +L VGG   +KAQEAELR RPD+V+CTPGRM+DHL NS SVHMDD+EILVLDEADRLLELGF EEV ELV+ CP  RQT+LFSATM +KVD L  L++ +PVR+   PL    + LVQEFVRIR +RE+DREAILL+L  RTF + TIVF +TK  AHR+ II GLAGI++AELHGNL   +RLEAL +
Sbjct:  169 KDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGLP-LKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQK 421          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A662YB28_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YB28_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.640e-101
Identity = 166/252 (65.87%), Postives = 200/252 (79.37%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEAL 252
            +D+CASA TGSGKTAAF+LPILERL +R ++V  TRVM++ P REL  Q  SM   LA++TDI+ +L VGG   +KAQEAELR RPD+V+CTPGRM+DHL NS S+HMDD+EILVLDEADRLLELGF EEV ELV+ CP  RQT+LFSAT+ +KVD L  L++ +PVR+   PL    + LVQEFVRIRQ+RE DREAILL+L  RTF T TIVF +TKV AHR+ II GLAGI++AELHGNL   +RLEAL
Sbjct:  289 KDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITCSLAVGGLP-LKAQEAELRNRPDVVVCTPGRMIDHLRNSKSIHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVARQTMLFSATLTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRQNREGDREAILLALCTRTFRTNTIVFMETKVHAHRMMIIFGLAGIKAAELHGNLLQRERLEAL 539          
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Match: A0A3M6VKN0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN0_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.260e-101
Identity = 166/254 (65.35%), Postives = 201/254 (79.13%), Query Frame = 0
Query:    1 RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQIHSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSATMNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAILLSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLEALDR 254
            +D+CASA TGSGKTAAF+LPILERL +R ++V  TRVM++ P REL  Q  SM   LA++TDI+ +L VGG   +KAQEAELR RPD+V+CTPGRM+DHL NS SVHMDD+EILVLDEADRLLELGF EEV ELV+ CP  RQT+LFSATM +KVD L +L++ +PVR+   PL    + LVQEFVRIR +RE+DREAILL+L  RTF T TIVF +TK  AHR+ II GLAGI++AELHGNL   +RLEAL +
Sbjct:  266 KDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITISLAVGGLP-LKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLINLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLMQRERLEALQK 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6009.13683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJM8_ECTSI4.140e-15392.52DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YJC4_9STRA3.000e-12777.13P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2V390_9STRA1.670e-10666.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1C375_9STRA3.830e-10566.80Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3PR35_9STRA4.190e-10364.57Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2WP83_9STRA1.710e-10266.14Hypothetical protein (Fragment) n=2 Tax=labyrinthu... [more]
M4BEJ4_HYAAE4.810e-10264.57Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0N9A9_PHYIT1.510e-10164.96DEAD/DEAH box RNA helicase, putative n=9 Tax=Phyto... [more]
A0A662YB28_9STRA1.640e-10165.87Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VKN0_9STRA4.260e-10165.35Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..185
e-value: 1.1E-35
score: 134.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..169
score: 28.629
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..158
e-value: 2.3E-39
score: 134.9
NoneNo IPR availableGENE3D3.40.50.300coord: 171..255
e-value: 1.4E-7
score: 32.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..170
e-value: 1.4E-62
score: 212.7
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..254
NoneNo IPR availablePANTHERPTHR24031:SF637ATP-DEPENDENT RNA HELICASE DDX27-RELATEDcoord: 1..254
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 115..123
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..170
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 106..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6009contigH-paniculata_contig6009:3021..13021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6009.13683.1mRNA_H-paniculata_contig6009.13683.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6009 3021..13021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6009.13683.1 ID=prot_H-paniculata_contig6009.13683.1|Name=mRNA_H-paniculata_contig6009.13683.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp
RDVCASATTGSGKTAAFMLPILERLLYRPKKVAVTRVMVVTPTRELGVQI
HSMCNSLAQYTDISSALVVGGNKNVKAQEAELRARPDIVICTPGRMVDHL
TNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPKGRQTLLFSAT
MNTKVDDLASLALNKPVRVRASPLNSAPQRLVQEFVRIRQSREEDREAIL
LSLLARTFTTKTIVFFDTKVLAHRLNIILGLAGIRSAELHGNLAMTQRLE
ALDRQVVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR027417P-loop_NTPase