prot_H-paniculata_contig6009.13682.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6009.13682.1
Unique Nameprot_H-paniculata_contig6009.13682.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: D7FJM8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM8_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 7.720e-44
Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            VLVATDLAARGLDITGVHTVINFEMPRS +SYIHRVGRTARAGCGGRSVTLIGESRR++MK+VLKTQGEGVEIKSRAVPQ+ IDHFR
Sbjct:  606 VLVATDLAARGLDITGVHTVINFEMPRSADSYIHRVGRTARAGCGGRSVTLIGESRRIVMKEVLKTQGEGVEIKSRAVPQSAIDHFR 692          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A835YJC4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.520e-40
Identity = 74/87 (85.06%), Postives = 82/87 (94.25%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            VLVATDLAARGLDITGVHTVIN+EMPRS ++YIHRVGRTARAGCGGRSVTLIGESRR++MKDVLK Q E  E+KSRAVPQ+VIDH+R
Sbjct:  584 VLVATDLAARGLDITGVHTVINYEMPRSRDTYIHRVGRTARAGCGGRSVTLIGESRRLVMKDVLKIQAEKAEVKSRAVPQSVIDHYR 670          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A482SS31_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS31_9ARCH)

HSP 1 Score: 108 bits (270), Expect = 1.770e-25
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQG------EGVEIKSRAVPQTVIDHF 87
            VLVATD+AARGLDI GV TVIN EMPR   +Y+HRVGRTARAGCGGR++TL+ + RR +MK+VLK +G      +G +I SR +  +V+ H+
Sbjct:  381 VLVATDVAARGLDIQGVQTVINSEMPRDVSTYVHRVGRTARAGCGGRAITLVSDERRKVMKEVLKGEGGKMSSEQGGQILSRTIASSVLVHY 472          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A1E7FR92_9STRA (DEAD-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR92_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.400e-24
Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGE---------------GVEIKSRAVPQTVIDHF 87
            +L+ATDLAARGLDI+ V TVINFEMP   E+YIHR+GRTARAG GGRS TLIGE RR +MK+++K   E                  I+SR++P  VI HF
Sbjct:  309 ILLATDLAARGLDISRVETVINFEMPNQVETYIHRIGRTARAGRGGRSCTLIGEGRRHLMKEIMKDASERKQITPNESSTNRSQSATIRSRSIPAAVIAHF 409          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A2G8KK60_STIJA (RNA helicase n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KK60_STIJA)

HSP 1 Score: 105 bits (261), Expect = 2.920e-24
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            +LVATDLAARGLDI GV TVIN  MP + + Y+HRVGRTARAG GGRSV+LIGES R ++KD++K     V  KSR VP  V++ +R
Sbjct:  492 ILVATDLAARGLDIEGVKTVINLTMPNTAQHYVHRVGRTARAGKGGRSVSLIGESERRMLKDIIKQSKTAV--KSRTVPHEVVERYR 576          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: Q20AI2_ICTPU (DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 (Fragment) n=1 Tax=Ictalurus punctatus TaxID=7998 RepID=Q20AI2_ICTPU)

HSP 1 Score: 101 bits (251), Expect = 5.570e-24
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            +LVATD+AARGLDI GV TVINF MP +P+ Y+HRVGRTARAG  GRSV+L+GES R ++K+++K       +K+R +PQ VI  FR
Sbjct:   81 ILVATDVAARGLDIDGVKTVINFTMPNTPKHYVHRVGRTARAGKVGRSVSLVGESERKMLKEIVKKAK--APVKARIIPQEVILKFR 165          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A7S2V390_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V390_9STRA)

HSP 1 Score: 103 bits (258), Expect = 7.370e-24
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVE------------IKSRAVPQTVIDHFR 88
            VL+ TD+AARGLD+ GV TVIN +MPR+  +YIHRVGR+ARAG  GR+VTL+GE RR +MK+VL+                   +KSR VPQ+V+DHFR
Sbjct:  357 VLLCTDVAARGLDVAGVRTVINLDMPRTRTTYIHRVGRSARAGKSGRAVTLVGEGRRAVMKEVLRHHXXXXXXXXXXXXXXXSMMKSRTVPQSVVDHFR 455          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A6P8VZ95_GYMAC (RNA helicase n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8VZ95_GYMAC)

HSP 1 Score: 102 bits (254), Expect = 2.560e-23
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            +LVATD+AARGLDI GV TVINF MP +P+ Y+HRVGRTARAG  GRSV+L+GES R I+K+V+K+    V  K+R +P  VI  FR
Sbjct:  490 ILVATDVAARGLDIDGVKTVINFTMPSTPKHYVHRVGRTARAGKSGRSVSLVGESERRILKEVVKSAKNSV--KARVLPPDVILKFR 574          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A2I4BNL9_9TELE (RNA helicase n=5 Tax=Rivulidae TaxID=28771 RepID=A0A2I4BNL9_9TELE)

HSP 1 Score: 102 bits (254), Expect = 2.570e-23
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            +LVATD+AARGLDI GV TVINF MP + + Y+HRVGRTARAGC GRSV+L+GES R ++K+V+K+    V  K+R +P  VI  FR
Sbjct:  482 ILVATDVAARGLDINGVKTVINFTMPSTIKHYVHRVGRTARAGCSGRSVSLVGESERKMLKEVVKSAKSSV--KARVLPPEVILKFR 566          
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Match: A0A2T7NHJ8_POMCA (RNA helicase n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NHJ8_POMCA)

HSP 1 Score: 102 bits (253), Expect = 3.510e-23
Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 0
Query:    2 VLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSVTLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFR 88
            VL+ATDLA+RGLDI GV TVINF MP + + Y+HRVGRTARAG  GRSVTL+GE  R ++K+V+K       +KSR VP  V++HFR
Sbjct:  468 VLLATDLASRGLDIEGVKTVINFTMPNTLKHYVHRVGRTARAGKAGRSVTLVGEKERKMLKEVVKHAK--TPLKSRIVPPEVVEHFR 552          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6009.13682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJM8_ECTSI7.720e-4491.95DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YJC4_9STRA2.520e-4085.06P-loop containing nucleoside triphosphate hydrolas... [more]
A0A482SS31_9ARCH1.770e-2558.70DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
A0A1E7FR92_9STRA2.400e-2455.45DEAD-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2G8KK60_STIJA2.920e-2462.07RNA helicase n=2 Tax=Stichopus japonicus TaxID=307... [more]
Q20AI2_ICTPU5.570e-2459.77DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 (Fragmen... [more]
A0A7S2V390_9STRA7.370e-2454.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6P8VZ95_GYMAC2.560e-2362.07RNA helicase n=2 Tax=Notothenioidei TaxID=8205 Rep... [more]
A0A2I4BNL9_9TELE2.570e-2360.92RNA helicase n=5 Tax=Rivulidae TaxID=28771 RepID=A... [more]
A0A2T7NHJ8_POMCA3.510e-2360.92RNA helicase n=2 Tax=Pomacea canaliculata TaxID=40... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..94
e-value: 5.6E-27
score: 96.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 2..74
NoneNo IPR availablePANTHERPTHR24031:SF637ATP-DEPENDENT RNA HELICASE DDX27-RELATEDcoord: 2..74
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..44
e-value: 1.2E-17
score: 64.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..87
score: 13.596
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6009contigH-paniculata_contig6009:707..2533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6009.13682.1mRNA_H-paniculata_contig6009.13682.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6009 707..2552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6009.13682.1 ID=prot_H-paniculata_contig6009.13682.1|Name=mRNA_H-paniculata_contig6009.13682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MVLVATDLAARGLDITGVHTVINFEMPRSPESYIHRVGRTARAGCGGRSV
TLIGESRRMIMKDVLKTQGEGVEIKSRAVPQTVIDHFRYNQQMWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase