prot_H-paniculata_contig6008.13681.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6008.13681.1
Unique Nameprot_H-paniculata_contig6008.13681.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length271
Homology
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BLAST of mRNA_H-paniculata_contig6008.13681.1 vs. uniprot
Match: A0A6H5L995_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L995_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.190e-79
Identity = 130/172 (75.58%), Postives = 145/172 (84.30%), Query Frame = 0 
Query:  107 RGIDVSEV--------LHPGAGGGGGGKANKPLRDCVLNVERVRVSTKQLEDDLTNKGAPPGLNGLVKGLIKNYKLDESLRQGVMYIESSGDRRTADSAGREALEYLAQTAEYFPPELDERTGMAKVMNAEALEFTVNALGATRAKLDLYLSKIPPDALREARAELKAEGGD 270
            +GID+SEV        +H GAG  GG KA KPLRDC+LNVERVR+STKQLED LTN GAPPGL GLVKGLIKNYKLDESL+QG  YIESSGDR TA SAGREALEYLAQTAEYFP E+D+RTG  K +++EALEFTVNAL ATRAKLDL+LSK+P DAL EARAE+K+EGGD
Sbjct:   90 KGIDLSEVXXXXXXXXMHLGAGSSGG-KATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDESLQQGAKYIESSGDRNTAASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSEGGD 260
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BLAST of mRNA_H-paniculata_contig6008.13681.1 vs. uniprot
Match: A0A7S2XY69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY69_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.610e-23
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 0 
Query:  126 KANKPLRDCVLNVERVRVSTKQLEDDLTNKGAPPGLNGLVKGLIKNYKLDESLRQGVMYIESSGDRRTADSAGREALEYLAQTAEYFPPELDERTGM----AKVMNAEALEFTVNALGATRAKLDLYLSKIPPD-------ALREARAELKAEG 268
            K  KPL +C+ +V  V+++TKQLEDD+TN      +    + L++NYKL+E+LRQGV Y+ES+ +R  A    +EALE L    EYFP   D  TG     +  +  E ++F+V AL +T   L+ YLS +P +       ++ E  AE +A G
Sbjct:  118 KPTKPLEECLESVALVQLTTKQLEDDITNGQEIGDIPAQAQLLLRNYKLEENLRQGVQYLESNAERVEATKYAKEALEDLILITEYFPESYDNFTGKRLPSSLTLTPEKIKFSVKALSSTTKALEGYLSTMPVEMVAKVKQSIAEDMAESEASG 271
[Close]
BLAST of mRNA_H-paniculata_contig6008.13681.1 vs. uniprot
Match: A0A7S3TS97_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TS97_9SPIT)

HSP 1 Score: 57.0 bits (136), Expect = 6.560e-6
Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = 0 
Query:  126 KANKPLRDCVLNVERVRVSTKQLE--------DDLTNKGAPPGLNGLVKGLIKNYKLDESLRQGVMYIESSGDRRTADSAGREALEYLAQTAEYFPPELDERTGMAKVMNAEALEFTVNALGATRAKLDLYLSKIPPDALREARAELKAE 267
            K+   L++ +  + RV+ +T Q E         D+        LN +    + NYKL + +     Y   + +   A  AG+EA++ L    EYF  EL + +G+     +    F V+A+ ATR KLD +L  +P + ++ AR +++ E
Sbjct:   98 KSVNELQEALYLISRVQEATVQQERLVSTGKFKDMQRNSIKMALNMM----LNNYKLGDQIVVASAYASPADNVFKASQAGKEAIDVLETAQEYFAKEL-KVSGLTDTQRS----FIVDAMTATRTKLDNFLKFMPAETVQAARKQVEDE 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6008.13681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L995_9PHAE1.190e-7975.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XY69_9STRA4.610e-2338.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3TS97_9SPIT6.560e-627.33Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.587
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6008contigH-paniculata_contig6008:7487..10782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6008.13681.1mRNA_H-paniculata_contig6008.13681.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6008 7228..11540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6008.13681.1 ID=prot_H-paniculata_contig6008.13681.1|Name=mRNA_H-paniculata_contig6008.13681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
MQPTLRRSASLALILAPYICNAFLALSPGAAIVHHRTITPEVCTTTMMST
PGADGGEASSSWSRGAFLSQGASSATSAVVGWTVIGSASVTAPGRASAKD
IVGIDVRGIDVSEVLHPGAGGGGGGKANKPLRDCVLNVERVRVSTKQLED
DLTNKGAPPGLNGLVKGLIKNYKLDESLRQGVMYIESSGDRRTADSAGRE
ALEYLAQTAEYFPPELDERTGMAKVMNAEALEFTVNALGATRAKLDLYLS
KIPPDALREARAELKAEGGD*
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