prot_H-paniculata_contig6008.13680.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6008.13680.1
Unique Nameprot_H-paniculata_contig6008.13680.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length242
Homology
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.440e-92
Identity = 163/246 (66.26%), Postives = 189/246 (76.83%), Query Frame = 0
Query:    2 LYKSLCVATAALACFTAADAFGLGVPAAGAASRVASKACAAS------RPSSIPTPRMSTMESSSPSPGIARATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTELINKEREVQRAAAEAKREAEKSAQDY 241
            +Y  LCVA AALAC + A+AFGLG  AA  A RV+  + AAS      R S +P P MSTME+S        A DVLADLDELDSVMGV+T DQQDLKPKQAYLNKLAGQAAQL+WRK+  D+GS ++ VA+LTEKIVYLTKHMQ +PHDYHSRRGLITMVNKRR QLNY+F+KEP +CLEMC  LGIRFRPKTKVR REQRYAAY NTKSKIG ARRT ++NKER   +   + ++ A + A+ Y
Sbjct:    1 MYNLLCVAAAALACLSTANAFGLGGGAARGACRVSRASKAASSVTSVARRSLVP-PSMSTMEASG-------AADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGY 238          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.540e-51
Identity = 87/149 (58.39%), Postives = 119/149 (79.87%), Query Frame = 0
Query:   68 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTEL 216
            A+DVLADL+ LD+ M  D  D  DL+P+Q YLN+LA QAA+  W++   DSGSA+VQVA++TE+I+YLTKH+Q +P D+HSRRGLI +VN RR+QLNY F  EP +CL++C +LGIRF+P++ V+SREQ+Y++++NTKSKIG  R   L
Sbjct:   78 ASDVLADLEALDNAMSDDKEDS-DLEPRQPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 225          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.200e-48
Identity = 88/149 (59.06%), Postives = 120/149 (80.54%), Query Frame = 0
Query:   68 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTEL 216
            A+DVLADL+ LDSV+  D  D  DL+P+Q YLN+LA QAA+  W++   DSGSA+VQVA++TE+I+YLTKHMQ +P D+HSRRGLI +VNKRR+QLN+ F  +  +CLE+C +LGIRF+P++ V+SREQ+Y++++NTKSKIG  R   L
Sbjct:   49 ASDVLADLEALDSVLSEDKEDA-DLEPRQPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 196          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S2S8K6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8K6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.400e-24
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0
Query:   98 YLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAY 201
            +LN  A  AAQ +W++   DSGS + Q+AV  E+I YLT H+Q NP D+ SRRGL+ +VNKRR  LNY +RK P + + M   LG+RF+P   V++RE++YA Y
Sbjct:  112 FLNLQALLAAQQKWKRHDSDSGSPEYQIAVAHERIKYLTAHLQRNPKDFASRRGLVAIVNKRRRLLNYLYRKNPEKAMGMVTELGVRFKPPGTVQTREEKYAVY 215          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH)

HSP 1 Score: 99.4 bits (246), Expect = 1.170e-22
Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 0
Query:  100 NKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARR 213
            N+ A  AA L+WR+D  D+GS +VQVAV+TE+I YLT H+  +P D  ++RGL  +VN RR  LN+    +  +  +MC  LGIR++P  +V  +E +Y+A++NTK+K   A++
Sbjct:    4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKK 117          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S0CN17_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CN17_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.650e-22
Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 0
Query:   74 DLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQ----AAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSK 207
            D+++ D ++ +  LD  D  P     +  A Q    A +  WR   +D GS  VQVA +TE+I YLT+H++ +P D+ ++RGL+ +VNKRR  LNY + K P +  E+  ALG+R +P  +V+SR ++Y AY   K K
Sbjct:   65 DVEDDDFLLNIGELDPADNVPTDEVPDNYAHQQRLIATRKEWRTSDIDCGSPDVQVAGMTERITYLTRHLKEHPKDFSTKRGLLALVNKRRKLLNYLYSKNPERYAELVAALGVRHKPVGRVQSRSEKYGAYPQQKPK 202          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.970e-21
Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   84 VDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSK 207
            +D  +  + +P  +Y + ++    + +W +   DSGS + Q+A +TE+I+YLTKHMQ NP D+ +RRGL+ +VNKRR  LNY FR    + +E+  +LGIR +   +V +RE+ Y  +   K K
Sbjct:   27 LDASEDTESEPSSSYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7R9YE60_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE60_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.230e-20
Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = 0
Query:  100 NKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTK 205
            NK+A      ++++   DSGSA+ QVA +TE+I YLT+H + +P D HSRRGLI +V+KR+  LNY  +++P     +CK LGIRF+P  ++ +R ++Y+A++  K
Sbjct:  122 NKMAVTETSSKYKRHETDSGSAEFQVATMTERIKYLTEHARRHPKDNHSRRGLIALVSKRKRLLNYLTKEKPEVVEPLCKDLGIRFKPAGRIMTRAEKYSAFKARK 227          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.820e-20
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 0
Query:  111 WRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKS 206
            WR+   D+GS + QVA +TE+I YLTKH+Q NP DY +RRGL+ +VNKRR  LNY  R++  +  ++  +LGIR +   +V SRE +Y  +   KS
Sbjct:   82 WRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177          
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S2PJX5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJX5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.200e-19
Identity = 52/138 (37.68%), Postives = 83/138 (60.14%), Query Frame = 0
Query:   68 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTK 205
            A D +    +LDSV   +     + +P   +  +L     + ++R+   D+GS + QVA +TE+I YLTKH+QANP D+ +RRGL+ +VNKRR  LNY F+++  +   +  +LGIR +   +V SR ++YA Y + K
Sbjct:   74 APDFIVSSSDLDSVEDDEEDGVMEFEPPVGFTYQLKLAEVREQFRRHDTDTGSPEYQVASMTERISYLTKHLQANPKDFSTRRGLVALVNKRRRMLNYLFKEDVERYKTLVDSLGIRHKAPGRVMSRAEKYAKYASKK 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP06_ECTSI1.440e-9266.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ48_9STRA1.540e-5158.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDP8_9STRA3.200e-4859.06Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2S8K6_9STRA1.400e-2450.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SQL1_9ARCH1.170e-2243.8630S ribosomal protein S15 n=1 Tax=archaeon TaxID=1... [more]
A0A7S0CN17_9STRA4.650e-2239.13Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1C329_9STRA5.970e-2138.7130S ribosomal protein S15 n=2 Tax=Corethron hystri... [more]
A0A7R9YE60_9STRA5.230e-2043.40Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9ZK55_9STRA7.820e-2046.8830S ribosomal protein S15 n=2 Tax=Craspedostauros ... [more]
A0A7S2PJX5_9STRA1.200e-1937.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..240
NoneNo IPR availableGENE3D1.10.287.10coord: 99..184
e-value: 9.0E-23
score: 82.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..241
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePRODOMPD157043coord: 117..184
e-value: 2.0E-14
score: 192.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.701
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 95..184
e-value: 4.9E-28
score: 109.1
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 113..184
e-value: 4.7E-23
score: 81.2
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 112..184
e-value: 1.2E-22
score: 78.0
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 112..186
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 87..185
score: 16.333
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 105..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6008contigH-paniculata_contig6008:1708..6955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6008.13680.1mRNA_H-paniculata_contig6008.13680.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6008 476..7198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6008.13680.1 ID=prot_H-paniculata_contig6008.13680.1|Name=mRNA_H-paniculata_contig6008.13680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MLYKSLCVATAALACFTAADAFGLGVPAAGAASRVASKACAASRPSSIPT
PRMSTMESSSPSPGIARATDVLADLDELDSVMGVDTLDQQDLKPKQAYLN
KLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRR
GLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAA
YRNTKSKIGTARRTELINKEREVQRAAAEAKREAEKSAQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd