mRNA_H-paniculata_contig6008.13680.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6008.13680.1
Unique NamemRNA_H-paniculata_contig6008.13680.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 4.550e-86
Identity = 160/226 (70.80%), Postives = 180/226 (79.65%), Query Frame = 1 
Query:  247 LYKSLCVATAALACFTAADAFGLGVPAAGAASRVASKACAAS------RPSSIPTPRMSTMESSSPSPGIARATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTELINKER 906
            +Y  LCVA AALAC + A+AFGLG  AA  A RV+  + AAS      R S +P P MSTME+S        A DVLADLDELDSVMGV+T DQQDLKPKQAYLNKLAGQAAQL+WRK+  D+GS ++ VA+LTEKIVYLTKHMQ +PHDYHSRRGLITMVNKRR QLNY+F+KEP +CLEMC  LGIRFRPKTKVR REQRYAAY NTKSKIG ARRT ++NKER
Sbjct:    1 MYNLLCVAAAALACLSTANAFGLGGGAARGACRVSRASKAASSVTSVARRSLVP-PSMSTMEASG-------AADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKER 218
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA)

HSP 1 Score: 176 bits (447), Expect = 5.150e-47
Identity = 87/149 (58.39%), Postives = 119/149 (79.87%), Query Frame = 1 
Query:  445 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTEL 891
            A+DVLADL+ LD+ M  D  D  DL+P+Q YLN+LA QAA+  W++   DSGSA+VQVA++TE+I+YLTKH+Q +P D+HSRRGLI +VN RR+QLNY F  EP +CL++C +LGIRF+P++ V+SREQ+Y++++NTKSKIG  R   L
Sbjct:   78 ASDVLADLEALDNAMSDDKEDS-DLEPRQPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 225
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.140e-43
Identity = 88/149 (59.06%), Postives = 120/149 (80.54%), Query Frame = 1 
Query:  445 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARRTEL 891
            A+DVLADL+ LDSV+  D  D  DL+P+Q YLN+LA QAA+  W++   DSGSA+VQVA++TE+I+YLTKHMQ +P D+HSRRGLI +VNKRR+QLN+ F  +  +CLE+C +LGIRF+P++ V+SREQ+Y++++NTKSKIG  R   L
Sbjct:   49 ASDVLADLEALDSVLSEDKEDA-DLEPRQPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 196
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S2S8K6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8K6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.130e-22
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 1 
Query:  535 YLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAY 846
            +LN  A  AAQ +W++   DSGS + Q+AV  E+I YLT H+Q NP D+ SRRGL+ +VNKRR  LNY +RK P + + M   LG+RF+P   V++RE++YA Y
Sbjct:  112 FLNLQALLAAQQKWKRHDSDSGSPEYQIAVAHERIKYLTAHLQRNPKDFASRRGLVAIVNKRRRLLNYLYRKNPEKAMGMVTELGVRFKPPGTVQTREEKYAVY 215
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH)

HSP 1 Score: 99.4 bits (246), Expect = 9.150e-21
Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 1 
Query:  541 NKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSKIGTARR 882
            N+ A  AA L+WR+D  D+GS +VQVAV+TE+I YLT H+  +P D  ++RGL  +VN RR  LN+    +  +  +MC  LGIR++P  +V  +E +Y+A++NTK+K   A++
Sbjct:    4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKK 117
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S0CN17_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CN17_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.010e-20
Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:  463 DLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQ----AAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSK 864
            D+++ D ++ +  LD  D  P     +  A Q    A +  WR   +D GS  VQVA +TE+I YLT+H++ +P D+ ++RGL+ +VNKRR  LNY + K P +  E+  ALG+R +P  +V+SR ++Y AY   K K
Sbjct:   65 DVEDDDFLLNIGELDPADNVPTDEVPDNYAHQQRLIATRKEWRTSDIDCGSPDVQVAGMTERITYLTRHLKEHPKDFSTKRGLLALVNKRRKLLNYLYSKNPERYAELVAALGVRHKPVGRVQSRSEKYGAYPQQKPK 202
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.360e-19
Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 1 
Query:  493 VDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKSK 864
            +D  +  + +P  +Y + ++    + +W +   DSGS + Q+A +TE+I+YLTKHMQ NP D+ +RRGL+ +VNKRR  LNY FR    + +E+  +LGIR +   +V +RE+ Y  +   K K
Sbjct:   27 LDASEDTESEPSSSYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150
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BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7R9YE60_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE60_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.120e-18
Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:  541 NKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTK 858
            NK+A      ++++   DSGSA+ QVA +TE+I YLT+H + +P D HSRRGLI +V+KR+  LNY  +++P     +CK LGIRF+P  ++ +R ++Y+A++  K
Sbjct:  122 NKMAVTETSSKYKRHETDSGSAEFQVATMTERIKYLTEHARRHPKDNHSRRGLIALVSKRKRLLNYLTKEKPEVVEPLCKDLGIRFKPAGRIMTRAEKYSAFKARK 227
[Close]
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.940e-18
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 1 
Query:  574 WRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTKS 861
            WR+   D+GS + QVA +TE+I YLTKH+Q NP DY +RRGL+ +VNKRR  LNY  R++  +  ++  +LGIR +   +V SRE +Y  +   KS
Sbjct:   82 WRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177
[Close]
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Match: A0A7S2PJX5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJX5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.530e-18
Identity = 52/138 (37.68%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:  445 ATDVLADLDELDSVMGVDTLDQQDLKPKQAYLNKLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRRGLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAAYRNTK 858
            A D +    +LDSV   +     + +P   +  +L     + ++R+   D+GS + QVA +TE+I YLTKH+QANP D+ +RRGL+ +VNKRR  LNY F+++  +   +  +LGIR +   +V SR ++YA Y + K
Sbjct:   74 APDFIVSSSDLDSVEDDEEDGVMEFEPPVGFTYQLKLAEVREQFRRHDTDTGSPEYQVASMTERISYLTKHLQANPKDFSTRRGLVALVNKRRRMLNYLFKEDVERYKTLVDSLGIRHKAPGRVMSRAEKYAKYASKK 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6008.13680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP06_ECTSI4.550e-8670.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ48_9STRA5.150e-4758.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDP8_9STRA1.140e-4359.06Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2S8K6_9STRA2.130e-2250.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SQL1_9ARCH9.150e-2143.8630S ribosomal protein S15 n=1 Tax=archaeon TaxID=1... [more]
A0A7S0CN17_9STRA4.010e-2039.13Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1C329_9STRA3.360e-1938.7130S ribosomal protein S15 n=2 Tax=Corethron hystri... [more]
A0A7R9YE60_9STRA3.120e-1843.40Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9ZK55_9STRA3.940e-1846.8830S ribosomal protein S15 n=2 Tax=Craspedostauros ... [more]
A0A7S2PJX5_9STRA6.530e-1837.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6008contigH-paniculata_contig6008:476..7198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.6
Seed ortholog evalue5.4e-13
Seed eggNOG ortholog159749.K0TMZ8
Preferred nameMRPS15
KEGG koko:K02956,ko:K05061
KEGG Pathwayko03010,ko04060,ko04151,ko04630,ko04640,ko05200,map03010,map04060,map04151,map04630,map04640,map05200
KEGG ModuleM00178,M00179
Hectar predicted targeting categorychloroplast
GOsGO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0040008,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0065007,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.Belongs to the universal ribosomal protein uS15 family
EggNOG OGs2XCVW@2836,COG0184@1,KOG2815@2759
Ec32 ortholog descriptionRibosomal protein S15, bacterial-type
Ec32 orthologEc-06_007070.1
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04050,ko04090
Exons5
Model size2201
Cds size726
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930668.0349767-UTR-H-paniculata_contig6008:475..17071622930668.0349767-UTR-H-paniculata_contig6008:475..1707Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6008 476..1707 -
1691481397.9622395-UTR-H-paniculata_contig6008:475..17071691481397.9622395-UTR-H-paniculata_contig6008:475..1707Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6008 476..1707 -
1622930668.1341157-UTR-H-paniculata_contig6008:6955..71981622930668.1341157-UTR-H-paniculata_contig6008:6955..7198Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6008 6956..7198 -
1691481398.0241504-UTR-H-paniculata_contig6008:6955..71981691481398.0241504-UTR-H-paniculata_contig6008:6955..7198Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6008 6956..7198 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930668.0535624-CDS-H-paniculata_contig6008:1707..18451622930668.0535624-CDS-H-paniculata_contig6008:1707..1845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 1708..1845 -
1691481397.9738014-CDS-H-paniculata_contig6008:1707..18451691481397.9738014-CDS-H-paniculata_contig6008:1707..1845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 1708..1845 -
1622930668.0829144-CDS-H-paniculata_contig6008:2330..24361622930668.0829144-CDS-H-paniculata_contig6008:2330..2436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 2331..2436 -
1691481397.984134-CDS-H-paniculata_contig6008:2330..24361691481397.984134-CDS-H-paniculata_contig6008:2330..2436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 2331..2436 -
1622930668.098528-CDS-H-paniculata_contig6008:3421..36151622930668.098528-CDS-H-paniculata_contig6008:3421..3615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 3422..3615 -
1691481397.9947155-CDS-H-paniculata_contig6008:3421..36151691481397.9947155-CDS-H-paniculata_contig6008:3421..3615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 3422..3615 -
1622930668.110049-CDS-H-paniculata_contig6008:5704..58781622930668.110049-CDS-H-paniculata_contig6008:5704..5878Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 5705..5878 -
1691481398.0052898-CDS-H-paniculata_contig6008:5704..58781691481398.0052898-CDS-H-paniculata_contig6008:5704..5878Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 5705..5878 -
1622930668.1218767-CDS-H-paniculata_contig6008:6841..69551622930668.1218767-CDS-H-paniculata_contig6008:6841..6955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 6842..6955 -
1691481398.0147185-CDS-H-paniculata_contig6008:6841..69551691481398.0147185-CDS-H-paniculata_contig6008:6841..6955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6008 6842..6955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6008.13680.1prot_H-paniculata_contig6008.13680.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6008 1708..6955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6008.13680.1

>prot_H-paniculata_contig6008.13680.1 ID=prot_H-paniculata_contig6008.13680.1|Name=mRNA_H-paniculata_contig6008.13680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MLYKSLCVATAALACFTAADAFGLGVPAAGAASRVASKACAASRPSSIPT
PRMSTMESSSPSPGIARATDVLADLDELDSVMGVDTLDQQDLKPKQAYLN
KLAGQAAQLRWRKDGMDSGSAQVQVAVLTEKIVYLTKHMQANPHDYHSRR
GLITMVNKRRTQLNYFFRKEPTQCLEMCKALGIRFRPKTKVRSREQRYAA
YRNTKSKIGTARRTELINKEREVQRAAAEAKREAEKSAQDY*
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mRNA from alignment at H-paniculata_contig6008:476..7198-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6008.13680.1 ID=mRNA_H-paniculata_contig6008.13680.1|Name=mRNA_H-paniculata_contig6008.13680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6723bp|location=Sequence derived from alignment at H-paniculata_contig6008:476..7198- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATGATCGTGAAGAAATGGCGTTTTCGTCATTATTCTCTATTTGTACGA
AGGCGTCTATCGCCGCATTAATAAAAAATCAACATCCCCACTGCAGTGAT
CGTGAACAGGGTGTTGGTGCCGAGTGCCGAGAGAGTGCTGCGCTGGAACG
AGACGGCAAGTACCAAGCTACACAAATACCCACAGGCATCATCGGGCGTG
CTTAATATAGATCTGTAGAGATACAGGTTCATAAGTGAAAACCATGTTGT
ACAAGTCTCTCTGCGTGGCGACGGCGGCCCTGGCATGCTTCACCGCAGCC
GACGCATTTGGGCTTGGCGTGCCGGCGGCAGGAGCAGCATCCAGGGTAGC
GTCAAAGGTGAGAACACCAAATAGCTGCTCAAGTCAAAGACCGACCCTTA
CCTGTCGTGAAAGCTTGGCTCTGGTGCAGGCTGAATGTACTTCTGTTACT
CACATATCCCCAATAGGAAACACATATTGTCACAAGTGGCAGCCTGCCCA
GGAATATGCGCATTTTAGACTCGAGTGTGTGGTTCGGCTGGGTGTGCGCA
CCCTTGGCGTCATGAAGGATTTGCCCTGCCTCGTTCGTAGAACAGCGGAA
GTTCAAGTATCGATATTCTTGTGGTGATGAGAGCCCTCCTTTGATGAACG
TAATGCCGCTCCGCGTGTGATTGTGTTGTTGAAAACTGTCTGGTTCTAGC
TGCATCAAACCACGTGCGTTGGGATTGTACGATATGCTGTCATATTGAGA
TAAACATGCTACAACCGAGGGTGTTTCGTCAAGCGCCGCGTGGTTCAACA
GTTGATGGCTTCAAGGGCGATCACGCTACCCTGAGATGGTTGCGTTGGCC
TCTGCTGTTGGAATTTGGTGTAGAGGGTATTCTCACCCGCGGATCGCCCC
ACTATACCTCTCCAGGACGTTTCGTACTATGGTATCAGCTTTGTGCCGAC
GCGCCGACTTCCCTACAGATTAAACTTGAATCCTGGTATTCACAGTACCA
ACGTTTTGTGACAAAGATGGTGAGTGTGGAGCCCAACAACTTTATACCTG
GTGTTTAGTCGAAACGTCATTTTTTAAACCAGGTGATTGGGCACTTGATG
AGCAGTGAATAAAGAGATCGTGAGTGGGAATCTATAGGCACAATGGCTAT
CCACGTGTTGGACGACCAACATCTATCTTTCATTCCCTCACCTATAACAG
GACAGTGTTGTAGCGACTTGTTCGAAATCCATCTACTTGATGTCAATATG
GACTGACTTGACTAAACAGTTCGTGGTCCATGTCCCTGGCTCCCACTATT
TGCTCGTGAAAACATCGAAGGCGTGCGCCGCCAGCCGACCATCGTCGATA
CCAACGCCCAGGATGTCGACGATGGAATCTTCGTCACCATCACCTGGCAT
CGCGCGCGCTACCGATGTTTTGGCGGACCTCGACGAGCTCGACTCAGTCA
TGGGTGTGGACACACTGGACCAACAGGATCTAAAGCCCAAGCAGGTGGGT
GGGTGTCGCTTATCTGAGTATTTCAGTGAGAAAAGGTTACGTCTTCTGTT
GGAGATCTATTCACTGTAGTTTAGTGAGAAAAAATGGTTGTACGCTGGTA
ACGATGACCGCGGTGTCGTGTACTTCCAGTGTTCGGTGTTGTTCTCACTG
TAACGTGTAGAGCCGACTGTCATCAGTGTATGGCTGCTTGTTGGGGTATT
ATGTTTTATATACAGGTGTGCTTCCTACGTTTTGGGGAATTATGTTGGTT
CGAGTTTTGTCCTTGCTGAAGTATTATCTGTAGTCCAGATGATACTAGGG
CTGAGAGAGTCGCGAAGGTTTCACGTGGCCCGGATCAGTGAAGGATGCTC
TATCAATAGTGCGTCACACATGGACCGACCGTAAAATGGACCGTTACTCA
ACTTTTGCCTCGTCTGTTGTCGAATGCTAGCGTGTAAAGGAAACACTCAC
CGCACTGCAGCACATTGGAATATTCGGCAGCGACGAAGGGAGTAGCATAA
TGACGGCGAACGGTTGAGAGCTCCTACTGGGGACTATTATCTCACTGGGG
CCACGATGCATCAAACAAGATCAAGCAACGAATCCAGCTATCACATTGCT
TTATCAACTTGTGTTGCCGTCTTGTACACCCCCAAAAAATTCACACGCAC
TACGAAGGATATTTGATAGAATGACCACAGCTTAGTCTCAATGACCTGTG
TGTGCTGGGCGTGACTGTTCTATGGCTGTGCTGCAGCTCATAACTGAACG
TTGTCCATTCCCGGTCTCCGTCTAATATCCTGAGCCCAGCCGAAATCACG
ATGCCCGTGAGAAAATAGCGGTATTCTCGTGCCATGGGTCTGGTGTGCAT
CTATCAAAATAATAAATTACAGCTTGGTAGATAAAAATGCGTATTATTAA
ACTCGAAGGCTTTCTCATCACCGGCAAAATTTCACAGAAACGAGCGCGAA
CCAGTTGTGCAAATGAATCATCACAGAACCGCTACCGAGAAGCGGTTCTA
GCTCTGGTCATGCGTAAATGTACTATGTTCGGTAGTGAGCTGAGGATATT
CAGCAAAGAGAAGGGAGATGAGGCTGCTAGAGTGGGGAGTGCCAATGTGC
CAACAGAGTAGATATGTAGATTTGTTCAGACACGTAATATGAAGCACAAA
AATTTTCAAGATACAAAGTCTCAAACATCTCCGATCATCTTCACTTGTCA
GCTTCTCGCACATAACATGAGGTTGTTCAGGACCCAACCCGGTACACCTG
TTTCATGACTAGTCCTATGTTCAAATTTTTCAACTGGTGCCCGGGACACG
TAACATGACCGGCTTGTCGTTGAAATCGTAAAATCGATGCCCCGGTATAC
ATGTATCGTGACCAGCTCGATTTTCAGATTATACAACCGGTGCCCCGGTA
CACATGTATACAAGACCGGCTATGCCTAAAACTGTCAGGCAAAACCAACC
ACGAACCGGTTGTAGAAGTGAAAAATCAGACACTACCGACCGCCAATCAG
CTTGAAGCACACAGGCTGAACCGACGGCGAACCGGTTGTACAAATGGTTA
ATCTCACAGAACACTATCGAGAACTGGTTCCGGTTCTGGTTACACTTGAA
AGTCATTTGTAATATCGGTCAAGTGAAAAGCCTTGGTTTTTTCATTTGTT
TTTATATGAGCAGATACATGCTTCCACACACTGTTGGCCTTTGCGCCCAC
TGTCGTGTTTGAGGCATACGCCACAAACTGCTCTTGACCTCGTGATCCAA
ACGTTCTTTGTTGGCCGTATCAGGATTTTTTTTCCCAGTCTAGCTGATTT
TTTTTTTTTTTGCAATTGCAAAGGATCCGATTCACCATGGGTGTTTTGCG
CTCAAAATCGTTCAAGAGTCATTTTTTATACCTCGAATCTCGCTCCGACT
TTCCGGAAAAGAAGTGCGCACAAAGCTGTCTTGACAAAAAGTTCCATTTT
TAAGCGGTCGCTTCGGGTAAAAAGAGGGACGAAGTTCGACGAAGATTTGT
TCTGCGCAAATAATCTTCTCAGCACTTATTCATGAAGAACTCCCTCACTC
TCTGTCTACTGCACAACTTATGCTGCCCATCAGGCTTACCTTAACAAGCT
CGCGGGACAGGCCGCCCAGCTGAGGTGGCGTAAGGACGGAATGGACTCGG
GGTCGGCACAGGTCCAGGTTGCGGTGCTGACGGAGAAAATTGTGTACCTC
ACGAAACACATGCAAGCTAACCCACACGACTACCACTCCCGCCGTGGTCT
CATCACGATGGTCAACAAGCGGCGTACGTGAGAATCAACCAAATCGAGTA
TTTGTTCTTGTTTTCCCCTTCAGTTTCTTTTCTCTTCCTCCACGTCCTCT
GCTTGCTCGTCTTGTCTTCTTTTGACACACAGTAATCTCTCTTTTGTCCA
GCCATGGAGGTACTACTGTCATTTCACGCTTGTTCCCATTTCGTAAATAG
GGTAGAGAGGGGGAGAAGGGCGTAACTTACAGACGGGAAGCACTTTGTTG
GAGTGCCTCCAAGTGTGCGTGCAGTAGTACCGCCGAGTGGGTCCAGTCAC
TGTATTTAAACGTATACTCGCGCGGAAAATTATGTTTCGGCGAATGCATG
GGCCATCAGTCGATAGCAGATTGAAAATGCCTCCTCTCCGTGGTTCCTTC
AGTCCTCTCTCGTTTTTCTTGGCCATGTGGTAGTGCACATAAGCGCACAT
AATGGCTGATGAATATTCTGTAGTGTACGTTCTCCCTCCTTCGACCTATG
CACGTGCCTCTCGCAGAGTGCGAATAAAATGTAGATGGCGGAAAATAGCT
TTTCCACTCCATTCGCGCATAATATCAAGAGGATCAAAGGTACTTTGCCT
TGGTATCTACGCGCCCCCACATGCACACACGAGTATTTGCGCATGCTGTC
ACAAAAATACAAGTCATGACTGTTATCATCCATCCTCGTGGCCTAGTGTA
CTTCACCGTCGATAGGATACGAAACACATTTTTCATCACCCTTGTGAAAT
AGGGAAGAGGCTGAATTGTCACTGCGCATAATTATCTATAAACGGGATAA
CCAATATATTTTTGAGTCACCTTGGGTTGGATAGAAAACAGCGTTTGGCC
ATCGGCAATTCTCCTGAGGGCGCGTAGTTGGCCCAATAGTTGAGGCAATG
CAGAACATGAGTTCGTTCCCCCGCATTCACGCCCCTGTTTCGTATGCCAT
TCTCACCGTCACGTCTTCCCTGTGTTGAAATGGAATATGACCTATCGTGT
ACGACGTGACAGGCAACTGAACTACTTCTTCCGAAAGGAGCCCACCCAGT
GCCTGGAGATGTGCAAGGCTCTGGGGATCCGATTCCGACCCAAGACGAAA
GTCAGGTCACGCGAGCAGGTGCCTTAATGGATACCAGCTGCCTTTTTTTT
CGTTTCCTGTTAGTAGTTTCAGGTTTGATTATTTTTTTATTTTTTCTCTT
CATATGTCAACTTTTCGTGTTTCGATTTTTGCGCAACAACAAACATTAAA
GAGAAGACTTTGAAGACCGATGAAAGATTGCGGAAAGCGTTGAACAGCTT
TCCGTCTGTTTATGCCATCAGAATGCGTATCCTGCTGCTGCTTGTAGTCG
AGGTGAAAATAAATCCTGTTCCGTGTAGATAAAGTGGTGTGCCGATCCTG
TTTTTTTCTGAAAACGCCCACCGTCGCCCTTGTTGCATCGTCGACAGATG
GGTTTTCTGACTAACTAGAGCTGCGTTGTTTCGAATCCCCCCCCCCCGTT
GCGGTATTGGAAATTTGGCGATTACTCTAATTGTGGCTATAAGTACAGGC
TGAATTAAAGAACCCCCGACCCCCTTGTTCATCGCTCTCTTTGATTGATT
CAGCGTTACGCAGCGTACAGAAACACCAAGTCCAAGATCGGAACTGCCCG
CCGTACGGAGCTCATCAACAAGGAGCGCGAGGTGCAACGGGCTGCGGCTG
AGGCAAAGAGGGAAGCGGAAAAGAGTGCCCAGGATTACTAATCGAGTGTC
GTCGTCGGAGGGTTTCGTGCTTATTCCTCCTCACCCCCCACCGTTGCTGC
CGTCGTGGCGTATTCGGCTCACGCTTGCGTATAACTGGGGTAGGTTGTTG
AGGGGCCACTAGTCGGTCATATTTCGTCTTAGGGTGCCTTTTAATTGGTT
CGATTTCGGCTTGCCTCTGGCCCACGTTTGTATTCAAGATGTGTTGTTCG
CTCTTCAAGCTGCGAATAGCTGGCCATCCACGGTTACTTTAGTGTGCACT
TTGTTTTCGAATTCGAATACGTCTTTCTCGTCCTAGCATATCGGCTAGAT
TATCAGCAATTATGGATTATGGCGGTGTTGTGTCGACCTCTTGAAGGGCT
GCGAGATTTGGTCTTCAAATCATCGCTTTTTGCTTGGTTCAACAAGCGGT
CAATCGATGCAAACGTAACTACGCAGCATCCCCCCCCCCCCCCATTTCCA
TGTATCACCATTTTTGTCACGTAGAACAAGCGGAGGGGAGGCAAGATATT
TTGCGTGAATGCGCGCGAGGTATCAGTCGCGTGAACGTTGAAACGAACAC
AGACGGGTGAGCGTAAGTGGCCTTGGTTTATCGTGTGATAATTGGACGAA
TTCGTCGTTTGTGGAAAAGATGAGATCAGAGAAAGACTACAGTATACGAG
AATTTGGCACATGCGGGGGTCGAGGGGAGGGACAGAAAATTAGACCAAAC
AAAAAGACATGACTCAGCAAGACGCTTCGAGACGAGTATGCGTCAAAACA
GCCGTTGTGAGTTTTTTTTATGAGAGGGGGAAAAGGATAATACGTTCTCC
GAATTTTCCCAGTAGGCAGGTATTTGAACAGAGAGCTATGTAGACCCATG
CCCATAGGATCGGATCTCATACCACACATGAGCGCGAGGAATTCGGGTTT
GTTTTCTTTCAGCGTGATCAATCTGTGGGGTACTGTACCTACCTGCGGAG
AGGACGCAGACTCCCCTTCGAATCATCTCTTGGGCTAGGCATGGCTCTAT
CTATCGTCGAACAAACTGCAGTGCAATAAACAAGCTCTTAGCCTGCGATA
TATATTGCGCCCTGGCACTCTGCGACCACGGGGGCTTCTCGGACGTCGAT
TTTATTGACAATAACACGCTTTATATCAGCGACTCTGGCCCTTCAACACT
CGTGCGAACCAGAGCGAATTTCCATGATCACAACTTTGTAAAAAGTACTT
CGGGGCTTGACAGTAAAAAGGAA
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Coding sequence (CDS) from alignment at H-paniculata_contig6008:476..7198-

>mRNA_H-paniculata_contig6008.13680.1 ID=mRNA_H-paniculata_contig6008.13680.1|Name=mRNA_H-paniculata_contig6008.13680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at H-paniculata_contig6008:476..7198- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGTACAAGTCTCTCTGCGTGGCGACGGCGGCCCTGGCATGCTTCAC
CGCAGCCGACGCATTTGGGCTTGGCGTGCCGGCGGCAGGAGCAGCATCCA
GGGTAGCGTCAAAGATGTTGTACAAGTCTCTCTGCGTGGCGACGGCGGCC
CTGGCATGCTTCACCGCAGCCGACGCATTTGGGCTTGGCGTGCCGGCGGC
AGGAGCAGCATCCAGGGTAGCGTCAAAGGCGTGCGCCGCCAGCCGACCAT
CGTCGATACCAACGCCCAGGATGTCGACGATGGAATCTTCGTCACCATCA
CCTGGCATCGCGCGCGCTACCGATGTTTTGGCGGACCTCGACGAGCTCGA
CTCAGTCATGGGTGTGGACACACTGGACCAACAGGATCTAAAGCCCAAGC
AGGCGTGCGCCGCCAGCCGACCATCGTCGATACCAACGCCCAGGATGTCG
ACGATGGAATCTTCGTCACCATCACCTGGCATCGCGCGCGCTACCGATGT
TTTGGCGGACCTCGACGAGCTCGACTCAGTCATGGGTGTGGACACACTGG
ACCAACAGGATCTAAAGCCCAAGCAGGCTTACCTTAACAAGCTCGCGGGA
CAGGCCGCCCAGCTGAGGTGGCGTAAGGACGGAATGGACTCGGGGTCGGC
ACAGGTCCAGGTTGCGGTGCTGACGGAGAAAATTGTGTACCTCACGAAAC
ACATGCAAGCTAACCCACACGACTACCACTCCCGCCGTGGTCTCATCACG
ATGGTCAACAAGCGGCGTACGCTTACCTTAACAAGCTCGCGGGACAGGCC
GCCCAGCTGAGGTGGCGTAAGGACGGAATGGACTCGGGGTCGGCACAGGT
CCAGGTTGCGGTGCTGACGGAGAAAATTGTGTACCTCACGAAACACATGC
AAGCTAACCCACACGACTACCACTCCCGCCGTGGTCTCATCACGATGGTC
AACAAGCGGCGTACGCAACTGAACTACTTCTTCCGAAAGGAGCCCACCCA
GTGCCTGGAGATGTGCAAGGCTCTGGGGATCCGATTCCGACCCAAGACGA
AAGTCAGGTCACGCGAGCAGGCAACTGAACTACTTCTTCCGAAAGGAGCC
CACCCAGTGCCTGGAGATGTGCAAGGCTCTGGGGATCCGATTCCGACCCA
AGACGAAAGTCAGGTCACGCGAGCAGCGTTACGCAGCGTACAGAAACACC
AAGTCCAAGATCGGAACTGCCCGCCGTACGGAGCTCATCAACAAGGAGCG
CGAGGTGCAACGGGCTGCGGCTGAGGCAAAGAGGGAAGCGGAAAAGAGTG
CCCAGGATTACTAACGTTACGCAGCGTACAGAAACACCAAGTCCAAGATC
GGAACTGCCCGCCGTACGGAGCTCATCAACAAGGAGCGCGAGGTGCAACG
GGCTGCGGCTGAGGCAAAGAGGGAAGCGGAAAAGAGTGCCCAGGATTACT
AA
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