prot_H-paniculata_contig6007.13679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6007.13679.1
Unique Nameprot_H-paniculata_contig6007.13679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 6.150e-28
Identity = 53/57 (92.98%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFKNPTPFLRTREFLWQEGHTAHASFE+AD+MV+QAL+LYRRVYEELLAVPVIMG
Sbjct:  547 RWEFKNPTPFLRTREFLWQEGHTAHASFEDADKMVIQALELYRRVYEELLAVPVIMG 603          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: B8LCI1_THAPS (Proline--tRNA ligase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCI1_THAPS)

HSP 1 Score: 109 bits (272), Expect = 1.300e-26
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK+PTPFLRTREFLWQEGHTAHAS+E+AD MVMQALDLYRRVYEELLA+PVI G
Sbjct:  167 RWEFKDPTPFLRTREFLWQEGHTAHASYEDADVMVMQALDLYRRVYEELLAIPVIPG 223          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A6T8LU20_9STRA (Proline--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LU20_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.050e-26
Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK+PTPFLR+REFLWQEGHTAHA+F+EA+EMVMQALDLYRRVYEELLAVPVI G
Sbjct:  193 RWEFKDPTPFLRSREFLWQEGHTAHATFDEANEMVMQALDLYRRVYEELLAVPVIPG 249          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A7S3XY27_HETAK (Proline--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY27_HETAK)

HSP 1 Score: 105 bits (261), Expect = 9.610e-26
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK PTPFLR+REFLWQEGHTAHAS+EEA+EMVMQAL+LYRRVYEELLA PV+ G
Sbjct:  243 RWEFKYPTPFLRSREFLWQEGHTAHASYEEANEMVMQALELYRRVYEELLACPVVPG 299          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A835YT63_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT63_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.230e-25
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK+PTPFLR+REFLWQEGHTAH +FEEA+EMV Q LDLYRRVYEELLAVPVI G
Sbjct:  552 RWEFKDPTPFLRSREFLWQEGHTAHTTFEEAEEMVFQILDLYRRVYEELLAVPVIKG 608          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A7S3XXY9_HETAK (Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXY9_HETAK)

HSP 1 Score: 105 bits (261), Expect = 5.750e-25
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK PTPFLR+REFLWQEGHTAHAS+EEA+EMVMQAL+LYRRVYEELLA PV+ G
Sbjct:  366 RWEFKYPTPFLRSREFLWQEGHTAHASYEEANEMVMQALELYRRVYEELLACPVVPG 422          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A7S3P631_9STRA (Proline--tRNA ligase n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P631_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.460e-24
Identity = 47/57 (82.46%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK PTPFLRTREFLWQEGHTAHA+FEEA++MVMQAL+LYR+VYE+L+AVPV+ G
Sbjct:  625 RWEFKYPTPFLRTREFLWQEGHTAHATFEEAEKMVMQALELYRQVYEDLMAVPVVPG 681          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A7S3L317_9STRA (Proline--tRNA ligase n=3 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L317_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.470e-24
Identity = 47/57 (82.46%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK PTPFLRTREFLWQEGHTAHA+FEEA++MVMQAL+LYR+VYE+L+AVPV+ G
Sbjct:  625 RWEFKYPTPFLRTREFLWQEGHTAHATFEEAEKMVMQALELYRQVYEDLMAVPVVPG 681          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: K0SBF7_THAOC (Proline--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBF7_THAOC)

HSP 1 Score: 103 bits (256), Expect = 2.190e-24
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK+PTPFLRTREFLWQEGHTAHASF++A+ MV +ALDLYRRVYEELLA+PV+ G
Sbjct:  161 RWEFKDPTPFLRTREFLWQEGHTAHASFDDANVMVRKALDLYRRVYEELLAIPVVPG 217          
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Match: A0A1E7F2C5_9STRA (Proline--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2C5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.870e-24
Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELLAVPVIMG 57
            RWEFK+PTPFLR+REFLWQEGHTAHA+FEEAD MVM ALDLY++VY++LL VPVI G
Sbjct:  127 RWEFKDPTPFLRSREFLWQEGHTAHATFEEADSMVMAALDLYKKVYQDLLCVPVIPG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6007.13679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI6.150e-2892.98Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
B8LCI1_THAPS1.300e-2689.47Proline--tRNA ligase (Fragment) n=1 Tax=Thalassios... [more]
A0A6T8LU20_9STRA2.050e-2689.47Proline--tRNA ligase n=1 Tax=Proboscia inermis Tax... [more]
A0A7S3XY27_HETAK9.610e-2685.96Proline--tRNA ligase (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YT63_9STRA4.230e-2585.96Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3XXY9_HETAK5.750e-2585.96Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3P631_9STRA1.460e-2482.46Proline--tRNA ligase n=2 Tax=Amphora coffeiformis ... [more]
A0A7S3L317_9STRA1.470e-2482.46Proline--tRNA ligase n=3 Tax=Amphora coffeiformis ... [more]
K0SBF7_THAOC2.190e-2482.46Proline--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A1E7F2C5_9STRA6.870e-2480.70Proline--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..57
e-value: 8.3E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 1..57
NoneNo IPR availablePANTHERPTHR43382:SF2BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASEcoord: 1..57
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..55
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..57
score: 9.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6007contigH-paniculata_contig6007:11768..11938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6007.13679.1mRNA_H-paniculata_contig6007.13679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6007 11768..11938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6007.13679.1 ID=prot_H-paniculata_contig6007.13679.1|Name=mRNA_H-paniculata_contig6007.13679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
RWEFKNPTPFLRTREFLWQEGHTAHASFEEADEMVMQALDLYRRVYEELL
AVPVIMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II