prot_H-paniculata_contig6002.13673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6002.13673.1
Unique Nameprot_H-paniculata_contig6002.13673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 2.710e-18
Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   87 IPRELDEFLVFLEGRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLY-RGKRVVSQSL-KVVLVGRGGTGKTSLCQSIMTGWAEPTAGSEDSTVHMDIHDTTLEGVSL 195
            +P++L+  L  L  R  FL   NPW EPP AV+  G  ISAV+ YF DL+  G   V + + KVVLVG+ G GKTSL QS+ TG   PT+GSE+STV +D+    + GV+L
Sbjct:  227 LPKQLEALLATLS-RLGFLVHENPWQEPPEAVVSKG--ISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNGVTL 334          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.280e-15
Identity = 57/134 (42.54%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   65 LWDCGAFAE-TRHAQDETFTDGEIPRELDEFLVFLEGRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            LWD    AE     + +  + G IP EL   L  L+G  D   G NPW EPP +++  G  + ++R YF DLY    RV  +S+KVVLVG+ G GKTSL QS+    A PT    E+STV  D+    LEG S+
Sbjct:  516 LWDHTCNAEDVGQERAKRMSGGTIPSELRRLLETLDGA-DTDLGGNPWAEPPESIVTKG--MESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSV 646          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 4.910e-14
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 0
Query:   61 KLRGLWDCGAFAETRHAQDETFTDGEIPRELDEFLVFLEGRRDFLTG--NNPWGEPPAAVIGDGRNISAVRSYFVDLY-RGKRVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEG 192
            +L  LWD    A+           G++P +L   L  L+     + G  +NPW EPPA+++  G   +++R YF DLY    RV   S+K++LVG+ G GKTSL QS+    A PT    E+STV  D+    LEG
Sbjct:  152 ELTALWDHTQNAQHVEEGGNRTLGGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGP--TSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEG 285          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.120e-13
Identity = 55/145 (37.93%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   62 LRGLWDCGAFAETRHAQD-------ETFTDGEIPRELDEFLVFLEGRRDFLTG--NNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            L  LWD      T + QD          + G IP +L   L  L+     +    +NPW EPP +++  G    ++R YF DLY    RV   S+KV+LVG+ G GKTSL QS+ T  A PT    E+STV  D+    LEG S+
Sbjct:  179 LTALWD-----HTHYLQDIVHEEGAHGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPK--SIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSV 316          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.920e-12
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   65 LWDCGAFAETRHAQD-------ETFTDGEIPRELDEFLVFLEG--RRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            LWD      T+  QD       ++ + G +P +L   L  L+    R    G NPW EPP +V+  G    ++R YF DLY    R+   S+KVVLVG+ G GKTSL QS+    A PT   +E+STV  ++    L+G S+
Sbjct:  324 LWD-----HTQDVQDIDPKERGDSMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPK--SIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSV 458          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 6.490e-12
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   61 KLRGLWDCGAFAETRHAQD--ETFTDGEIPRELDEFLVFLE---GRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGKRVVSQS-LKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            +   LWD     +  H ++  +    G +P +L   LV L+   G    L GN PW EPP +++  G    ++R YF DLY     + +S +KVVLVG+ G GKTSL QS+    A PT    E+STV  D+    LEG S+
Sbjct:   37 RFAALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGN-PWAEPPESIVAKGPK--SIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSV 175          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 9.010e-12
Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = 0
Query:   73 ETRHAQ-DETFTDGEIPRELDEFLVFL---EGRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            + RH +   +   G  PR+L   L  L   E   D    +NPW EPP +++  G     +R YF DLY    RV   S+K++LVG+ G GKTSL +S+    A PT    E+STV  D+    LEG S+
Sbjct:  261 DARHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAK--NIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSI 387          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.170e-11
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  105 LTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            L  NNPW +PP +++ +G     +R YF DLY    RV   S+K++ VG+GG GKTSL QS+    A PT    E+STV  D+    L+G S+
Sbjct:   29 LLENNPWAQPPESIVDEGAE--GIRRYFEDLYGDPGRVQRDSIKIIQVGQGGAGKTSLRQSMKANQAAPTPEWKEESTVFADVESMVLKGTSI 119          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.560e-11
Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   89 RELDEFLVFLEGRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            R L + L    G   F  G NPW EPP +++  G  +   R YF DLY    R+   S+KVVLVG+ G GKTSL +S+    A PT    E+STV  D+    L+G S+
Sbjct:    6 RRLPDVLDSSVGSNWFRLGGNPWAEPPESIVDKG--LKNTRGYFEDLYAEPCRIKRSSVKVVLVGQEGAGKTSLRKSMKANKATPTGDWKEESTVFADVEPMELQGSSV 112          
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.670e-6
Identity = 41/113 (36.28%), Postives = 55/113 (48.67%), Query Frame = 0
Query:   85 GEIPRELDEFLVFLEGRRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGK-RVVSQSLKVVLVGRGGTGKTSLCQSIMTGWAEPTAG-SEDSTVHMDIHDTTLEGVSL 195
            G +P  L   L  L+G            EP  A     +    +R YF DL+    R+   S+KV+LVG+ G GKTSLC+S+    A PT    E+STV  D+    LEG S+
Sbjct:   14 GPVPSHLRRLLDVLDG-----------AEPIVA-----KGAKGIRGYFEDLFSEPCRIQRNSVKVILVGQEGAGKTSLCRSMKANKAAPTGEWKENSTVFADVEPMVLEGASV 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6002.13673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FL98_ECTSI2.710e-1848.65LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI1.280e-1542.54LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI4.910e-1437.50LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI3.120e-1337.93LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI4.920e-1237.32LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI6.490e-1237.32LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FUD0_ECTSI9.010e-1237.98LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JFQ1_9PHAE1.170e-1143.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE1.560e-1141.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L846_9PHAE1.670e-636.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..95
e-value: 1.5E-19
score: 72.0
NoneNo IPR availableGENE3D3.40.50.300coord: 149..186
e-value: 1.2E-6
score: 30.5
NoneNo IPR availableGENE3D1.10.10.2190coord: 125..148
e-value: 1.2E-6
score: 30.5
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 1..64
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 1..64
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..67
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 3..62
e-value: 2.9E-9
score: 36.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 124..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6002contigH-paniculata_contig6002:5599..10064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6002.13673.1mRNA_H-paniculata_contig6002.13673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6002 5598..10064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6002.13673.1 ID=prot_H-paniculata_contig6002.13673.1|Name=mRNA_H-paniculata_contig6002.13673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
LTSLTSFHLSNSNITGSIPKELGGLTSLTSFTLSNNSITGHIPTVLGKLP
ALRIVDLGGNKLRGLWDCGAFAETRHAQDETFTDGEIPRELDEFLVFLEG
RRDFLTGNNPWGEPPAAVIGDGRNISAVRSYFVDLYRGKRVVSQSLKVVL
VGRGGTGKTSLCQSIMTGWAEPTAGSEDSTVHMDIHDTTLEGVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR027417P-loop_NTPase