mRNA_H-paniculata_contig6000.13671.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 6.890e-139 Identity = 204/389 (52.44%), Postives = 256/389 (65.81%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDG--LDYCNKHTGGGDDKYWSYPYTEP---NIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSR---FYVSYSVV-DAVGGVHNRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARL--GPCDGVDRSGFEFPIFEYCHPDYDSSLASEDA 1131
VVCG CHS+SAHLYE L AELG DGMTMK++FC+EL+ AC+GQIDFP+YD +DYC KHTGGGDD +WSYPY E ++ D+ + PD+ +++ +PDGS WW+ G+ G + + L + FYVDFEEGL+D AFGP+F NS FYVSY+V+ D NRL++F G AA T ASEEV + + R ++HA GW+GFKPS YG+ DLYW+ GD GPQ D H Q+ + ++R++VP G GYTIP GN G EICA G RNP+RC+FDR D+LYCGDVG E + ++ECG NYGWSRFEGSRCQEAV+ PCDGVDRSGF FP+FEYCHPD+DS+ DA
Sbjct: 6 VVCGRCHSFSAHLYEYLAAELGLLDGMTMKSAFCDELVTACDGQIDFPTYDSGTVDYCTKHTGGGDDLFWSYPYEEAVTCDLYSKLFPDLGANEQPDDTVSMRQTPDGSQWWLLGISGQIYAVNSDSMDESELVIHVAGPVPSGGSFYVDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYGNPGYQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPPGNYHGSKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDFDSTDICADA 394
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 1.950e-133 Identity = 205/387 (52.97%), Postives = 262/387 (67.70%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDKYWSYPYTEPNIAESGLTDVF----SVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADS---SEFYVDFEEGLIDFAFGPIFSSN---SRFYVSYSVVDAVGGV--HNRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGG-LPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEAR-LGP-CDGVDRSGFEFPIFEYCHPDYDSS 1113
VVCGVCHSYSAHLYE L + G DG+TMK+ FC EL+ C I+FP+YDG YC+ HTGGG+D +WSYPY EP I E GL +VF PD+ +++ +PDGS WW+ G+ G + + L V+D++ S FYVD+EEGL+D AFGP+FS + + FYVSY+V D + NRL++F G T ASEEV + + + +IH+ GW+GFKPS YG+ + DLYW+ GD GPQ D + H Q+ + ++R+TVP+ GDGYTIPSGN GG L EICA GFRNP+RC+FDRE D LYCGDVGHT +E + ++ECG NYGWSRFEGSRCQEAVE P CDG+ RSGF FP++EYCHPDY S+
Sbjct: 81 VVCGVCHSYSAHLYEYL-TDGGMLDGLTMKSEFCEELVDECAAYIEFPTYDGTSYCDHHTGGGNDFFWSYPYEEPEIFEPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSEL----VIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTV-DLNDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNSSPQDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQST 461
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 4.150e-133 Identity = 212/386 (54.92%), Postives = 257/386 (66.58%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDKYWSYPYTEPNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSP-----SAVMDLADS---SEFYVDFEEGLIDFAFGPIFSSN---SRFYVSYSVVDAVGGVH-NRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGG-LPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARL--GPCDGVDRSGFEFPIFEYCHPDYDS 1110
VVCGVCHSYSAHLYE L + G DG+TMKN FC L+ AC IDFP+YDG+ YC+ HTGGG D +WSYPY EP I E GL ++F PD DG Q T RQ S S V+D++ S FYVD+EEGL+D AFGP+FS + + FYVSY+V G V NRL++F G A T ASEEV + S+ +ST+IH+ GW+GFKPS YG+ + DLYW+ GD GPQ D + H Q+ + ++R+TVP+ G GYTIPSGN GG L EICA GFRNP+RC+FDRETD+LYCGDVGHT +E + ++ECG NYGWSRFEGSRCQEAVE PCDGVDRSGF FP++EYCHPDY S
Sbjct: 36 VVCGVCHSYSAHLYEYL-TDGGMLDGLTMKNEFCESLVDACAAYIDFPTYDGVSYCDHHTGGGADFFWSYPYEEPEIFEPGLNELF----PD-------LGDGE------------QPSDTVSMRQVDSDNMDDSSLVIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTVDLNDGEVQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYGNASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSS 397
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 348 bits (894), Expect = 5.890e-114 Identity = 188/388 (48.45%), Postives = 235/388 (60.57%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDG--LDYCNKHTGGGDDKYWSYPYTEPNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLA----DSSEFYVDFEEGLIDFAFGPIFSSNSR---FYVSYSVVDAVGGVH-NRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARL--GPCDGVDRSGFEFPIFEYCHPDYDSSLASE 1125
VVC CHSYSAHLYE LGAELG DG+TM + FC EL+ AC+GQI+FP+YD +DYC KHTGGGDD +WSYPY E ++ +G ++S WW+ + S V+D+A FY DFEEGL+D FGP+FS S FYVSY+V+ G + NRL++F G T A+EEV + + + +IH+ GW+GFKPSDYGS D H Q+ + ++R++VP+ G GYTIP GN G E+CA G RNP+RC FDR D LYCGDVGHTL+E + +IECG NYGWSRFEGSRCQEAV+ PCDGVDRSGF +P+FEYCHPDYDS+ A E
Sbjct: 4 VVCARCHSYSAHLYEYLGAELGMLDGLTMTSDFCEELVTACDGQIEFPTYDSGSVDYCTKHTGGGDDFFWSYPYKERSL--TGFLFLWSR-----------------WWVN--------------SDSMDSSELVIDVAGPVPSGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVLLDDGEMQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGS----------------TDPGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPGAKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADE 342
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 329 bits (844), Expect = 8.280e-104 Identity = 181/386 (46.89%), Postives = 228/386 (59.07%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDKYWSYPYTEPNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSP-SAVMDLAD---SSEFYVDFEEGLIDFAFGPIFSSN---SRFYVSYSV-VDAVGGVHNRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTS-HDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVG-GLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARLGPCDGVDRSGFEFPIFEYCHPDYDSSLASE 1125
VVCGVC SYS HLYE LGAELG DGMTMK+ FC EL +PD S++W+ G G + LS + V+D++ S E YVD+EEGL+ AF P+FS++ + FY+SY+V +D NRLSKF+ F G A TLASEEV + S+ + +IH+ GWVGF+PS YG+ S HD+YW+ GD Q D + HGQ+ ++ +++R++VP G GY IP+GN+ LPEICA GFRNP+RC+FDRETDELYCGDVGHTL+E + I+ECG NYGWSRFEGSRCQEA E+R GPC DRS F FPI+EYCHPDY S A E
Sbjct: 82 VVCGVCGSYSGHLYERLGAELGVLDGMTMKSDFCEEL--------------------------------------------------------------TPDSSMYWLVGQAGEIKMVDL-----DDLSTMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVELDDGENQRNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADE 400
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 327 bits (837), Expect = 9.220e-100 Identity = 177/400 (44.25%), Postives = 238/400 (59.50%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDK-----YWSYP------YTEPNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSRFYVSYSVVDAVGGVH--NRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGS--GTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTT--GDGYTIPSGNIVGGL----PEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARLG-PCDGVDRSGFEFPIFEYCHPDYDSSLASEDA 1131
V+CGVC YSAHLY L AE+G DG+ M FC+ + AC + + YC++H D+ YWSYP + E ++ + D+ LP P+A+ M+PDGS WWI G+ G + A + P V+D++D ++F +E+GL+ FAF P F+ FYVSYSV + + NRLSKF + G T SEE+ + S+ + +++H+ GWVGF PS Y G HD+YW+ GD GPQ D D Q++ ++H +IVR++VP+T G GY IP+GN G PEICA+G RNP RCAFD TDELYCGDVG +E V +IECGK+YGW FEGSRC + E G C G+DR+ + FP+FEYCH DYDSS DA
Sbjct: 90 VLCGVCSPYSAHLYTRL-AEMGD-DGLAMTRDFCDGFVMACGTDLALDAT----YCDEHVLDYSDENAAREYWSYPLDITAGFNEASVT-AAFPDLPEEDLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPT----DAIDVLDISDRADF--SYEQGLLGFAFSPSFTETGLFYVSYSVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSSQEEFDA 476
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI) HSP 1 Score: 291 bits (746), Expect = 1.600e-90 Identity = 162/358 (45.25%), Postives = 198/358 (55.31%), Query Frame = 1
Query: 79 MTMKNSFCNELIAACEGQIDFPSYDG--LDYCNKHTGGGDDKYWSYPYTEPNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSR---FYVSYSVV-DAVGGVHNRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARL--GPCDGVDRSGFEFPIFEYCHPDYDSSLASE 1125
MTMK++FC+EL+ AC+GQIDFP+YD +DYC KHTG G G + + L G + Q L + FY DFEEGL+D AFGP+F NS FYVSY+V+ D NRL++F G AA T ASEEV + + + ++H+ GW+GFKPS YGS DLYW+ GD GPQ D H Q+ G GYTIP GN G EICA G RNP+RC+FDR D+LYCGDVG +E + IECG NYGWSRFEGSRCQEAV+ PCDG+ RSGF FP+FEYCHPD+DS+ A E
Sbjct: 1 MTMKSAFCDELVTACDGQIDFPTYDSGTVDYCTKHTGRG---------------------------------------GGLILVVPLRGSMRQVNLDSMDESELVIDVAGPVPSGGSFYGDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAYGSPGYQDLYWTTGDGGPQTDPFNHSQD----------------GTGYTIPPGNYHGAKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADE 303
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 299 bits (766), Expect = 5.570e-90 Identity = 167/388 (43.04%), Postives = 208/388 (53.61%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDG--LDYCNKHTGGGDDKYWSYPYTE----PNIAESGLTDVFSVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSR---FYVSYSVV-DAVGGVHNRLSKFESF-GTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGSGTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARL--GPCDGVDRSGFEFPIFEYCHPDYDSSLASE 1125
VVCG CHS+SAHLYE L ELG DGMTMK+ FCNEL+ AC GQI+FP+YD +DYC KHTGGGDD +WSYPY E P D+ PD+ +++ +PDGS WW+ G+ G + Y GL+D AFGP+F +S FYVSY+V+ D NRL++F G T A+EEV + + + ++H+ GW+GFKPS YGS EICA G RNP+RC+FDR D+LYCGDVG +E + IECG NYGWSRFEGSRCQEAV+ PCDGVDRS F +P+FEYCHPD+DS+ A E
Sbjct: 83 VVCGRCHSFSAHLYENLAPELGLLDGMTMKSDFCNELLTACGGQINFPTYDNNTVDYCTKHTGGGDDFFWSYPYEEAISDPRFLNEVFPDLGDNQQPDDTVSMRQTPDGSQWWLLGISG---------------------------QIYA----GLLDLAFGPMFGDDSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSVHSAGWLGFKPSVYGSA--------------------------------------------------------EICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADE 383
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI) HSP 1 Score: 296 bits (759), Expect = 5.500e-88 Identity = 162/375 (43.20%), Postives = 221/375 (58.93%), Query Frame = 1
Query: 1 VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDKYWSYPYT-EPNIAESGLTDVF----SVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSRFYVSYSVVDAVGGVHNRLSKFE-SFGTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGS---GTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGD-GYTIPSGNIV---GGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARLGP-CDGVDRSGFEFPIF 1083
V+CG CH +S HL+E L MT+ FC++ C Q+ P+ DYC H G D+YWSYP + + + GL F ++PD P+ + M+PDGS WWI GL G +++ P S V+D+ SS FEEGL+ AF P F + FY SY + G NRLS+F+ +A TL SEEV + SS + + +H+ GW+GFKPS YG+ G H+L+W+ GDSGPQ DT + GQ+ + +H +I+R+ V + + GY+IPSGN GG EICA G RNP+RC+FDR D+LYCGDVGH +ES+ IECG NYGW +FEG RC + +E + C+ +DRS F FP F
Sbjct: 87 VMCGTCHPWSGHLFERLDT------AMTLTQEFCSQFYGECATQLGLPA----DYCEVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSSIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADPT----SAKTVLDM--SSLILWTFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGT--NRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYGNDAAGAVHELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSSEMESGYSIPSGNPFSGGGGRGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEF 443
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 283 bits (724), Expect = 1.110e-83 Identity = 156/379 (41.16%), Postives = 214/379 (56.46%), Query Frame = 1
Query: 4 VCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYDGLDYCNKHTGGGDDKYWSYPYT-EPNIAESGLTDVF----SVTLPDNPMALHMSPDGSVWWIAGLGGLLIQARTTFPARQSLSPSAVMDLADSSEFYVDFEEGLIDFAFGPIFSSNSRFYVSYSVVDAVGGVHNRLSKFE-SFGTAALTLASEEVYVESSTRSTAIHAGGWVGFKPSDYGS-----GTSHDLYWSNGDSGPQEDTDEHGQNIDDIHATIVRVTVPTTGDGYTIPSGNIVGGLPEICAYGFRNPFRCAFDRETDELYCGDVGHTLIESVYIIECGKNYGWSRFEGSRCQEAVEARLGP-CDGVDRSGFEFPIFEYCHPDY 1104
+CG CH +S HL+E L MT+ FC+E C Q+ P+ DYC H G D+YWSYP + + + GL F +PD P+ + M+PDGS WWI GL G +++ + V+D+ SS FEEGL+ AF P F + FY SY + G NRLS+F+ +AA TLASEE+ + SS + + +H+ GW+GFKPS YG+ G H+L+W+ GDSGPQ DT + GQ+ + +H +I+R+ V S + G E G RNP+RC+FDR D+LYCGDVGH +ES+ IECG NYGW +FEG RC + +E + C+ +DRS F FP F YCHPD+
Sbjct: 1 MCGTCHPWSGHLFERLDT------AMTLTQEFCSEFYGECATQLGLPA----DYCVVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVA----DATWAKTVLDM--SSLVLWTFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGT--NRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEV----------SSEMGSGDKE----GMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDF 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6000.13671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6000.13671.1 >prot_H-paniculata_contig6000.13671.1 ID=prot_H-paniculata_contig6000.13671.1|Name=mRNA_H-paniculata_contig6000.13671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp VVCGVCHSYSAHLYEILGAELGGTDGMTMKNSFCNELIAACEGQIDFPSYback to top mRNA from alignment at H-paniculata_contig6000:3942..8767+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6000.13671.1 ID=mRNA_H-paniculata_contig6000.13671.1|Name=mRNA_H-paniculata_contig6000.13671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4826bp|location=Sequence derived from alignment at H-paniculata_contig6000:3942..8767+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6000:3942..8767+ >mRNA_H-paniculata_contig6000.13671.1 ID=mRNA_H-paniculata_contig6000.13671.1|Name=mRNA_H-paniculata_contig6000.13671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig6000:3942..8767+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |