mRNA_H-paniculata_contig600.13669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A7S0AZG8_9STRA (CTP synthase (glutamine hydrolyzing) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZG8_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.200e-42 Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFLDRTFA 819
MG TMRLG R T T G +S LY V ERHRHRYEVNP++++EI +AGL+FVG+D TGTRME+AELPRS HP+YVG QYHPEF SRP +PSPPF GLILA++G +D+ +++ A
Sbjct: 1 MGGTMRLGARDTKFTHQHEDGSMSTAQILYNGADTVSERHRHRYEVNPDRVDEIHSAGLKFVGRDTTGTRMEVAELPRSEHPYYVGCQYHPEFKSRPLKPSPPFHGLILAATGLLDAHVEKAKA 124
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A835Z0Y6_9STRA (CTP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y6_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.020e-41 Identity = 80/119 (67.23%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFL 804
MG TMRLG R T+L+ ++GE S S LYG+ V+ERHRHRYEVNPE + +IEAAGLEFVG+D++G RMEIAELP S HP+YVGTQYHPEFLSRP EPSPPFLGL+LA+ ++D++L
Sbjct: 441 MGGTMRLGARSTILSA-RANGETSTVSRLYGNADSVLERHRHRYEVNPEMVADIEAAGLEFVGRDDSGKRMEIAELPSSVHPYYVGTQYHPEFLSRPLEPSPPFLGLVLAACNELDAYL 558
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: K0SW18_THAOC (CTP synthase (glutamine hydrolyzing) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW18_THAOC) HSP 1 Score: 155 bits (393), Expect = 4.280e-41 Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 448 MGATMRLGERKTVLT-PFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFLDR 810
MG TMRLG R T T P G S+ +Y + V ERHRHRYEVNP++++ I AGL+FVG+DETGTRME+AELPRS+HP+YVG QYHPEF SRP PSPPF GL+LA+ G +D ++ +
Sbjct: 40 MGGTMRLGSRNTAFTHPEHEDGSTSIAQVMYKNARVVSERHRHRYEVNPDRVDAIHEAGLKFVGRDETGTRMEVAELPRSKHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMLDDYVSK 161
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A7S2W397_9STRA (CTP synthase (glutamine hydrolyzing) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W397_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.770e-39 Identity = 72/119 (60.50%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFL 804
MG TMRLG R T G +S LYG V ERHRHRYEVNPE+++++E AGL+F+G+DETG RME+AELPR++HP+YVG QYHPEF SRP PSPPF GLI+AS GQ++ +L
Sbjct: 103 MGGTMRLGARITKFISRHVDGTMSTLQILYGGSETVSERHRHRYEVNPERVDDVERAGLKFLGRDETGERMEVAELPRTQHPYYVGCQYHPEFKSRPLVPSPPFHGLIMASCGQLEDYL 221
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A7S2RDI6_9STRA (CTP synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDI6_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.820e-38 Identity = 78/123 (63.41%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 442 TVMGATMRLGERKTVLTPFSS--SGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFL 804
T MG TMRLG R T+L P + +G SL S LY + + V ERHRHRYEVNPE + +E GL VG+DET TRMEIAELPRS HPFY+G QYHPEF SRP EPSPPFLGL+L++SGQ+D+++
Sbjct: 408 TTMGGTMRLGARDTILQPPKNGPAGVPSLSSQLYQNKTRVSERHRHRYEVNPEVVAALEEGGLNLVGRDETATRMEIAELPRSVHPFYMGVQYHPEFKSRPLEPSPPFLGLLLSASGQLDAWI 530
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A2P4XC99_9STRA (CTP synthase (glutamine hydrolyzing) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XC99_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.020e-37 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFL 804
MG TMR GER+T++ + SL S LYG + V+ERHRHRYEVNPE + I AGL FVG DE G RM++ EL R HPFY TQYHPEF S P +PSPPF GLILA++GQ+D F+
Sbjct: 1 MGGTMRCGERRTIVHEKEDPAKRSLVSYLYGKDTPVLERHRHRYEVNPELVPAIREAGLNFVGTDEKGERMQVVELDRDVHPFYFATQYHPEFKSHPNDPSPPFHGLILAATGQLDQFI 119
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: B5YN22_THAPS (CTP synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN22_THAPS) HSP 1 Score: 156 bits (395), Expect = 1.520e-37 Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 448 MGATMRLGERKTVLT-PFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFL 804
MG TMRLG R T T P G S+ +YG V ERHRHRYEVNPE+++ I AGL+FVG+DETGTRMEIAELPRS+HP+YVG QYHPEF SRP PSPPF GL+LA+ G +D ++
Sbjct: 435 MGGTMRLGSRNTKFTHPTHDDGSPSISKIMYGGSDTVSERHRHRYEVNPERVDTIHEAGLKFVGRDETGTRMEIAELPRSQHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMLDDYV 554
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A6U3T142_9STRA (CTP synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3T142_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.280e-37 Identity = 74/119 (62.18%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFS-SSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSF 801
MG TMRLG R T T G +S+ +Y + S V ERHRHRYEVNPE+++ I AGL+FVG+DETGTRMEIAELPRS+HP+YVG QYHPEF SRP PSPPF GL+LA+ G +D +
Sbjct: 356 MGGTMRLGSRNTAFTHSKHDDGSLSIAQIMYKNASVVSERHRHRYEVNPERVDAIHDAGLKFVGRDETGTRMEIAELPRSKHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMIDDY 474
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A7S3NKH0_9STRA (CTP synthase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKH0_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.910e-37 Identity = 76/126 (60.32%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYG-DVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQMDSFLDRTFAP 822
MG TMRLG R T+L S E SL + +YG D V ERHRHRYEVNP+ + ++E AGL F+GKDE+G+RMEI ELPRS HP++ G QYHPEFLSRPQ+PSPPF GLILA+ G+ D + AP
Sbjct: 482 MGGTMRLGARDTLLVSQSPKDEPSLAAIIYGQDKDRVTERHRHRYEVNPQLVPQLENAGLRFIGKDESGSRMEIIELPRSVHPYFFGVQYHPEFLSRPQKPSPPFFGLILAAIGRFDRYYKINLAP 607
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Match: A0A7S3PV28_9STRA (CTP synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV28_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.880e-37 Identity = 74/115 (64.35%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 448 MGATMRLGERKTVLTPFSSSGEVSLCSTLYGDVSEVVERHRHRYEVNPEKINEIEAAGLEFVGKDETGTRMEIAELPRSRHPFYVGTQYHPEFLSRPQEPSPPFLGLILASSGQM 792
MG MRLG R T T G +S LYG + V ERHRHRYEVNPEK++EI AGL+FVG+DE+G RME+AELPRS HPFYVG QYHPEF SRP PSPPF GL+LA++GQ+
Sbjct: 457 MGGNMRLGARNTKFTHKHDDGSMSTAQILYGGLDVVSERHRHRYEVNPEKVDEIHNAGLKFVGRDESGERMEVAELPRSEHPFYVGCQYHPEFKSRPLTPSPPFHGLVLAATGQL 571 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig600.13669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig600.13669.1 >prot_H-paniculata_contig600.13669.1 ID=prot_H-paniculata_contig600.13669.1|Name=mRNA_H-paniculata_contig600.13669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp MTGSTHTTWCFPRAPTTPPLSALSSWLISLKDDPHSLHRTEPDQMNPVPSback to top mRNA from alignment at H-paniculata_contig600:2094..5767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig600.13669.1 ID=mRNA_H-paniculata_contig600.13669.1|Name=mRNA_H-paniculata_contig600.13669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3674bp|location=Sequence derived from alignment at H-paniculata_contig600:2094..5767+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig600:2094..5767+ >mRNA_H-paniculata_contig600.13669.1 ID=mRNA_H-paniculata_contig600.13669.1|Name=mRNA_H-paniculata_contig600.13669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig600:2094..5767+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |