prot_H-paniculata_contig5996.13657.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5996.13657.1
Unique Nameprot_H-paniculata_contig5996.13657.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: D7FTF5_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF5_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.010e-42
Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MAFRATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWEVVDKMNE 117
            MAFRATQA+RM V KTSTGLVGLAVD N R N+I + K+IL+++K IP HAQYRKDVEAI  YRLKV  E EDEE IE  I  GQLEE++ +GK+ELKLID Y + ++WE VD++N+
Sbjct:    1 MAFRATQAVRMVVKKTSTGLVGLAVDVNARANFIALQKQILEKIKVIPDHAQYRKDVEAISGYRLKVATETEDEETIEDEINHGQLEELLVDGKNELKLIDKYAEWRLWEAVDELNK 117          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A7S2BEJ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEJ1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.430e-30
Identity = 64/111 (57.66%), Postives = 78/111 (70.27%), Query Frame = 0
Query:    2 AFRATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWEVV 112
            A R T+ +  AV KTSTGLVGL VD NGR N I M +++L+ VK IP  A YR+ VEA  +YRLKV  E  DEE IE+TI  GQLEE+IE+GKDE++LID Y   K WE+ 
Sbjct:    7 ALRLTRPVAQAVHKTSTGLVGLKVDLNGRANLIAMQQQLLEAVKAIPETAAYRQSVEATATYRLKVATEETDEEAIEKTIGFGQLEELIEQGKDEMELIDYYAGEKGWEMA 117          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A5D6XW11_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW11_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.210e-29
Identity = 59/106 (55.66%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    5 ATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWE 110
            AT+ LRMAVTKTSTG+VGL V+PN R + I + +K L  VK +P  A YR  VE I +YRLKV  +N+DE  IE+ IA+GQLEE+IE+ +DEL +I +Y + K+WE
Sbjct:    3 ATRVLRMAVTKTSTGIVGLPVNPNARQDLIKLYQKTLQEVKVLPEDAVYRDSVERITNYRLKVVLDNDDESAIEKEIAMGQLEELIEQAEDELSVIPVYLENKLWE 108          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: H3HBE7_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3HBE7_PHYRM)

HSP 1 Score: 107 bits (266), Expect = 3.260e-27
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 0
Query:    5 ATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQ-YRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWE 110
            A++ LRMAVTKTSTGLVGL V+PN R + I + ++ L+ VK +PP A+ YRK VE I ++RL V E NEDE+ IE+ I  GQLEE+IE+ +DEL +  +Y + K+WE
Sbjct:    3 ASRMLRMAVTKTSTGLVGLKVNPNARQDLIKIYRRTLEEVKILPPEAKNYRKVVEQITNFRLNVVESNEDEDVIERKINCGQLEELIEQAEDELSIFPVYIEHKLWE 109          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A835Z296_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z296_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.630e-27
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    4 RATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWE---VVDKMNE 117
            RAT   R A  KTSTGLVGL VDPN RVN       IL+++K IP H  YRK VEAI  YRLKV + +  +E++E  I  GQLEE+I +  DEL LI  YYD ++WE    +DK+++
Sbjct:   13 RATPVAREAWKKTSTGLVGLPVDPNARVNLAQKQNDILEKIKIIPEHTGYRKAVEAISKYRLKVLDSSLTDEQVEDEINCGQLEELIVQADDELGLIQFYYDERIWERREALDKIDQ 129          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A0P1AA63_PLAHL (Probable nadh dehydrogenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA63_PLAHL)

HSP 1 Score: 105 bits (263), Expect = 9.270e-27
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
Query:    9 LRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQ-YRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWE 110
            LRMAVTKTSTGLVGL V+PN R + I + ++ L+ VK +PP A+ YR  VE I ++RL V E NEDE+ IE+ I  GQLEE+IE+ +DEL +I +Y + K+WE
Sbjct:    7 LRMAVTKTSTGLVGLKVNPNARQDLIKIYRRTLEEVKVLPPEAKNYRNAVEQITNFRLSVVENNEDEDVIERKINCGQLEELIEQAEDELTVIPVYLEHKLWE 109          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: F0WM77_9STRA (Uncharacterized protein AlNc14C153G7580 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM77_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.350e-26
Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    6 TQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKK--IPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWEVVDKMNE 117
            T+AL  AV KTSTGLVGLAV+PN R + + + +K L+ VK   +P  A YR  VE I  +RLKV EENEDEE IE+ I  GQLEE+IE+ +DEL +I +Y + K+WE   K  E
Sbjct:    4 TRALCAAVRKTSTGLVGLAVNPNARKDLMQLYRKTLEEVKNQVLPEDAAYRDAVERITKFRLKVVEENEDEEVIEKEINCGQLEELIEQAEDELSVIPVYLEHKLWEPPVKSQE 117          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: K3WST9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WST9_GLOUD)

HSP 1 Score: 105 bits (261), Expect = 1.710e-26
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 0
Query:    5 ATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWE 110
            AT+ LRMA  KT+TG+VGL V+PN R + I + +K L  +K +P +  YR  VE I +YRLKV  ENEDE  IE+ I +GQLEE+IE+ +DEL +I +Y + K+WE
Sbjct:    3 ATRVLRMAAKKTTTGIVGLPVNPNARQDLIKIYQKTLQEIKVLPENTVYRDSVERITNYRLKVTLENEDEHVIEKEINMGQLEELIEQAEDELSVIPVYLENKLWE 108          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A7S2SRG1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRG1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.330e-26
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    1 MAFRATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQ-YRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWEVVDKMNEGREDLALDDYTDPED 132
            MA R T+ALR+AV+KTSTGLVGL VD N RVN I+M  ++L   +++ P    YR  V A  SYRLKV  E+++E++IE+ I  GQLEE+I + KDE++LI+ Y + + WE V      R+   LDD    +D
Sbjct:    6 MALRLTRALRLAVSKTSTGLVGLPVDVNARVNLISMQSQVLAAAERLLPEGTAYRDSVVATSSYRLKVATEHQEEDEIERIIGFGQLEELIWQAKDEIELIEYYAENRAWERVADAEFERD--VLDDIAQAKD 136          
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Match: A0A7S4E5V8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5V8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.410e-26
Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    8 ALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPHAQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLIDMYYDAKMWEVVDKMN 116
            A R A TKT+TG+VGL VDP+ R   I + +++LD +K++P  A+YRK VEA  +YRLK   ENEDE  +E+ I +GQLEE+IE   +EL ++ MY   +MW+V+ +++
Sbjct:   52 ARRAATTKTTTGIVGLPVDPHARETLIALNEQLLDEIKQVPEGAEYRKSVEATCNYRLKCLRENEDEATLEELIGMGQLEELIESQTEELGVLRMYVAEEMWKVIAELD 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5996.13657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTF5_ECTSI1.010e-4264.96NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A7S2BEJ1_9STRA1.430e-3057.66Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XW11_9STRA3.210e-2955.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3HBE7_PHYRM3.260e-2754.21Uncharacterized protein n=20 Tax=Peronosporaceae T... [more]
A0A835Z296_9STRA6.630e-2751.28NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A0P1AA63_PLAHL9.270e-2755.34Probable nadh dehydrogenase n=1 Tax=Plasmopara hal... [more]
F0WM77_9STRA1.350e-2653.51Uncharacterized protein AlNc14C153G7580 n=1 Tax=Al... [more]
K3WST9_GLOUD1.710e-2651.89Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2SRG1_9STRA4.330e-2647.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4E5V8_9STRA5.410e-2647.71Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PFAMPF04716ETC_C1_NDUFA5coord: 22..88
e-value: 1.9E-19
score: 69.2
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PANTHERPTHR12653NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNITcoord: 6..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5996contigH-paniculata_contig5996:4555..9483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5996.13657.1mRNA_H-paniculata_contig5996.13657.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5996 3655..9483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5996.13657.1 ID=prot_H-paniculata_contig5996.13657.1|Name=mRNA_H-paniculata_contig5996.13657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MAFRATQALRMAVTKTSTGLVGLAVDPNGRVNYINMGKKILDRVKKIPPH
AQYRKDVEAIFSYRLKVCEENEDEEKIEQTIALGQLEEMIEEGKDELKLI
DMYYDAKMWEVVDKMNEGREDLALDDYTDPEDLIASGESAEASSSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006806NDUFA5