prot_H-paniculata_contig5991.13650.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5991.13650.1
Unique Nameprot_H-paniculata_contig5991.13650.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1062
Homology
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BLAST of mRNA_H-paniculata_contig5991.13650.1 vs. uniprot
Match: D8LTD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD2_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 4.970e-48
Identity = 176/530 (33.21%), Postives = 227/530 (42.83%), Query Frame = 0 
Query:  559 IAALWSTTVRIVFQRELPMARPTSLSFSPSNNSTLALACWDGQIIILRPAATAPAA-----APTIDESTPLLKNGG--ASRLLKTPKTPVPGKSAAGAGDTREWTAVWREQGALSK----KESAHPEDQDGAFVCWCDQGDGQESGRDDPHAAEAATMMAAIAPALAISSYGVTLND-----------------TALHNPENLTHTGVGFMTPGSPTAIGFGPAFDGNTAAPTGPGLEVFAGEGLGDQVGGVIIGVR--GGLAEATAERYLIHGMAAGLNYLALYDSDRCLQLVSLGAMLEAGRVLTPQSAATTFASSAVRPADATQPPPAVVSGLALWQAVDGLSAGRDK--PPMRTRDTDSAVGAVYNGSTLEDSPDKEQSSSKAAAAPKMRALANNDHGLVKAEVLCCHPCDQDLENDQAPSRRAASCSDEDSLGLSITWRDALTRLETPDNGECSAVAAGGEVPSGNTCPRLPFLP---ALREEAEDSNVDGVIAADVRWGHMALFSRFTALVYTRPVSSKSVKGG 1053
            +AALWS          LPMAR TSLSFSP++++T ALACWDG++ +  PAA A AA     A   + ST     G   ++             +  G G  R W  VWRE  A  K    K   + EDQDG F+CWC              A++A+T        +A+S+Y  T  D                 T L  P N       F  P  P    + PA         GPG+EV A  GLG ++GG +   R  G   E TAERYLIHG+AAG  ++ALYDSD CL +VS+ AML    VL P +      + +  P +A+                 G SA  +   PP  TR+                                   L +NDHGL+ A V               P    A+   +  L L+ITWRDA + +ETPD+GEC          +G    RL FLP   A      D +  GV  ADVRW  +ALF+R T LVYTRP   K+ + G
Sbjct:   67 LAALWSVA--------LPMARVTSLSFSPNDSATFALACWDGKMALFLPAAPAQAAVLPPNASLCEASTNAATAGAPTSTXXXXXXXXXXXXDTGEGVGSKRAWKQVWREAAAPGKVGGGKGRENLEDQDGTFLCWC-------------KASDASTTN------VAVSTYCTTTGDYAKRPCGDPDEDERGSETTLPAPRNAAKE---FPLP-EPPREAYPPAM--------GPGIEVLAERGLGGRIGGAVSASRRDGVTQEPTAERYLIHGLAAGPGFVALYDSDLCLHVVSIAAMLSDTCVLPPPTPKIEVEALSGHPDEASP----------------GASADAEASTPPRPTRNV---------------------------------TLVDNDHGLIAACV----------RRHSGPGSADAAAPPDGGLDLAITWRDASSGVETPDDGECVGQR------TGENDRRLSFLPGELAGDYGGGDDDEGGVFCADVRWQRLALFTRETVLVYTRPAREKAGRKG 492
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5991.13650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTD2_ECTSI4.970e-4833.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 566..606
e-value: 15.0
score: 9.6
coord: 325..363
e-value: 0.095
score: 21.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 338..364
score: 9.105
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 43..608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5991contigH-paniculata_contig5991:3616..7502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5991.13650.1mRNA_H-paniculata_contig5991.13650.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5991 3616..7721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5991.13650.1 ID=prot_H-paniculata_contig5991.13650.1|Name=mRNA_H-paniculata_contig5991.13650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1062bp
MFALVSGGRKSPYGDRPSTGLFCSSPPPPDNDDGTPISTPSFVGTADSTF
SVTSAIPLEVSTSSPQGSFPADQDIPIDHAWSKDGAVLVVLRRASFTVYS
REDHHPCRRTTSSTTSEICGGIGNREGSVEAAKSAASTAGRIVCSALSVR
AGRASLGLAKVHSGRNRFEGKAVTCCPVPRRASGSTRRNSHCEGGKQTPR
GGGSSGGGGGGGGCYLVAVGGSFGIECHLLEASLSELRNAKASDSIAAAE
HCLQGTTATTAELFPNVSGKSKMEPDVITPLQGSRFPFVDTHTCTTTMSA
ATAVEAEAAAAAVAAVVPQSLSTWTCRFLTCLFDGYPVVTVEFAPDSKLL
AAAAMTGHVKLWNVLGLLALIHSPPPKSSAPPLPQRANSTPTQASGSRES
ALSGGGNSGKWKHGQRRKQGQQSPSQSPPPPQREYSTPTLASASRGSAMS
GGGSSSGKWKHGQRQRQVQQSPSQSSPPPQHINSTPTRTPGSRESALSGG
GSSGKWKHGQRRKQGQRLHQERKWKGSPASGVDNGGEGVGGGGGGGGGGG
SLSGGLGGIAALWSTTVRIVFQRELPMARPTSLSFSPSNNSTLALACWDG
QIIILRPAATAPAAAPTIDESTPLLKNGGASRLLKTPKTPVPGKSAAGAG
DTREWTAVWREQGALSKKESAHPEDQDGAFVCWCDQGDGQESGRDDPHAA
EAATMMAAIAPALAISSYGVTLNDTALHNPENLTHTGVGFMTPGSPTAIG
FGPAFDGNTAAPTGPGLEVFAGEGLGDQVGGVIIGVRGGLAEATAERYLI
HGMAAGLNYLALYDSDRCLQLVSLGAMLEAGRVLTPQSAATTFASSAVRP
ADATQPPPAVVSGLALWQAVDGLSAGRDKPPMRTRDTDSAVGAVYNGSTL
EDSPDKEQSSSKAAAAPKMRALANNDHGLVKAEVLCCHPCDQDLENDQAP
SRRAASCSDEDSLGLSITWRDALTRLETPDNGECSAVAAGGEVPSGNTCP
RLPFLPALREEAEDSNVDGVIAADVRWGHMALFSRFTALVYTRPVSSKSV
KGGERGRVVGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR011047Quinoprotein_ADH-like_supfam