prot_H-paniculata_contig599.13647.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig599.13647.1
Unique Nameprot_H-paniculata_contig599.13647.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1008
Homology
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BLAST of mRNA_H-paniculata_contig599.13647.1 vs. uniprot
Match: D8LKH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH5_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 8.990e-56
Identity = 118/254 (46.46%), Postives = 151/254 (59.45%), Query Frame = 0 
Query:  358 MLREVIKVLTDPASPGVGGNPNEPLLLVQKLALDETDAIFGAFESSYRRHATDAGGWSPEPGGFNRWLDTYHHAVLRKTRPVIVTVHGDDVCALELEISREARMAAAEAAGESTGHTNTDGPGGGENFDVPLVLVTLGWDPSGDPTHAEPALGRDSSCVRRVLQLPRVLKWFTSHTRYDSEVNEKFKYIPIGFGGYETRNGLPQTAYLDAAKKQLEIL-ETCPLDQAGNLDLL--FQGNTLERNPRAKIWHEMT 608
            MLR+V+KVLTDP S G+GG P+EPLLLVQKLALDETDAIFGAFE  +  +A DAG WSP PGGF+RWL  YH   L  +RPV+ TVHGDDVCALE E+    R+ +     E+ G T  D            ++ ++  +P   P  A     R ++  R  + +P          R                   ETR+GLP TAY+DAA++Q E+L ETCP+D+AG+   L  FQGNTL+R+PR KIW +MT
Sbjct:    1 MLRQVVKVLTDPTSAGLGGRPDEPLLLVQKLALDETDAIFGAFEPRFLGYAADAGSWSPLPGGFSRWLARYHRVALHGSRPVLATVHGDDVCALEKELYLGVRVPS-----EAGGVTPND------------IIDSIAEEP---PASASAGFRRQATNERGKVSIP------ADRVR-------------------ETRSGLPHTAYIDAARRQPEVLIETCPIDRAGSQLRLAVFQGNTLDRDPRTKIWKQMT 209
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BLAST of mRNA_H-paniculata_contig599.13647.1 vs. uniprot
Match: A0A820GX94_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A820GX94_9BILA)

HSP 1 Score: 55.5 bits (132), Expect = 5.320e-5
Identity = 52/190 (27.37%), Postives = 79/190 (41.58%), Query Frame = 0 
Query:  483 ENFDVPLVLVTLGWDPSGDPTHAEPALGRDSSCVRRVLQLPRVLKWFTSHTRYDSEVNEKFKYIPIGFGGYETRNGLPQTAYLDAAKKQLEILETCPLDQAGNLDLLFQGNTLERNP--RAKIWHEMTEKDSGPIPVNRAPLDAPDMLQAYARGIFAVSPPGTGADCFRHYELMLMGAITFV--QDRDPL 668
            ++   P VLVT   D S              S  R+ L  P++L W+ S+     + ++K   IPIG       +G       D AK     L       +    LL+    +  N   R K + ++++ ++  I   R   +    LQ      F +SPPGTG DC R +E +LMGA+  V   + DPL
Sbjct:   11 KSIQEPFVLVTHNSDKSAP------------SKYRKNLLHPKILIWYASNPSI--KCHQKLSPIPIGLANAHWTHG-------DLAKLTYA-LRNHRKSWSQRTSLLYVNFAIRTNKAQRKKAFLQVSKIENAQIVEERVTFET--YLQQIGNAKFVLSPPGTGLDCHRTWEALLMGAVPIVLTSELDPL 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig599.13647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKH5_ECTSI8.990e-5646.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A820GX94_9BILA5.320e-527.37Hypothetical protein (Fragment) n=1 Tax=Rotaria so... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 767..852
e-value: 4.4E-9
score: 36.4
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 763..862
score: 8.881
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 868..995
score: 7.819
NoneNo IPR availablePANTHERPTHR24269:SF16coord: 764..859
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 764..859
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..1007
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig599contigH-paniculata_contig599:10567..28703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig599.13647.1mRNA_H-paniculata_contig599.13647.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig599 9321..28996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig599.13647.1 ID=prot_H-paniculata_contig599.13647.1|Name=mRNA_H-paniculata_contig599.13647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1008bp
MVPSVYGCWRNDTREQTACGGRDGQRGSDTVVNEAGEDNSCLSNVMPPRR
RAILAAGATVAVIVCCALVVTPLLPDTTLVLDTPTAAASPAVSSASSVGD
NPFSFEARKHPQRTLHEDSNHSHSKTTLFFNNSHTTTYHARDGGESARDI
YAGEPIHLHDAVFMIAPHPFKEEDEWVNTKPVTPISRISVLPSTPPPQPS
PLSSRVGRQQSPDEQSKREVNDSPQRKYEIANSSSSHAFTTTPKVQIQLG
EEAKRERGDVVRGWNSDGVETTVATQRRRLAGKEAQRGRVARQVTAVSGV
EPRGKMILEKGGGFGGGMDDDADDYPAPCSSLKVTGLERCPELEGDFLPR
MLNVKRDMLREVIKVLTDPASPGVGGNPNEPLLLVQKLALDETDAIFGAF
ESSYRRHATDAGGWSPEPGGFNRWLDTYHHAVLRKTRPVIVTVHGDDVCA
LELEISREARMAAAEAAGESTGHTNTDGPGGGENFDVPLVLVTLGWDPSG
DPTHAEPALGRDSSCVRRVLQLPRVLKWFTSHTRYDSEVNEKFKYIPIGF
GGYETRNGLPQTAYLDAAKKQLEILETCPLDQAGNLDLLFQGNTLERNPR
AKIWHEMTEKDSGPIPVNRAPLDAPDMLQAYARGIFAVSPPGTGADCFRH
YELMLMGAITFVQDRDPLRSMMGDLPVFFFDDRVGTEKWYKLTCMKLKNM
SKMAEERIKEGKNGGKGFEFEKLTHNYWRKYIREETLKAGGSPPTAMYTE
RSIAPINTPGWRTFRRLGCFSRKHFERHNIPDSRKSELQEEERTPEGCAR
KCSWKAGGGIGFFGIKSGNRCWCDKEPGALVPQEQCNVPCQGEGDDADSC
GGSEASTVYVFGPEEPLPFEYVGCFYESHRVLYHVDVKLRHANTPFMCEA
LCTSLRYPFFALQKSSWCRCGVLTYNTPRSVRDPAFVEEFQPKERSPPDM
MMAGKPLPGVKVGDQRFQCHRGRCAGDPAMWGCGSMTAFDVYKVSSPCSL
YHDCADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd