prot_H-paniculata_contig59879.13646.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59879.13646.1
Unique Nameprot_H-paniculata_contig59879.13646.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5J8Q9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Q9_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.330e-39
Identity = 84/181 (46.41%), Postives = 113/181 (62.43%), Query Frame = 0
Query:   19 PKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQ-EIGEVSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCVY 198
            PK+      S+ +H+W ++M+ E  GL    T+ P  +    E+ I++KW+F WK DE G   KVK+RLV RGD Q E   VS  +         + AALAC     + HFD+EQAFV+S+L++ VYMRLPQG G  SG IV+L ++LYGLRQA+R+W   L R L A GFEQ +AD CV+
Sbjct:  118 PKSYKEAMPSEHRHLWSDSMQREFYGLLEAGTFFPAKEQL-AENAINAKWVFDWKADEFGCPTKVKSRLVARGDMQREYRSVSCVT---------MLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWRAMLKRCLVALGFEQCMADACVF 288          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.200e-38
Identity = 84/186 (45.16%), Postives = 116/186 (62.37%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIG--EVSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V P P +     QS+   VW  AM  E +GL    T+S    +    + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H D+EQAFVQ+ L  AV+M+LP G G  SG +VRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  162 DVQPEPDSYQEARQSKHAEVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCV 347          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.250e-38
Identity = 81/186 (43.55%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+P P +     +S+   +W +AM  E++GL    T++    + +  + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H D+EQAFVQS L   V+M+LP G    SG IVRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  413 DVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCV 598          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.310e-38
Identity = 81/186 (43.55%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+P P +     +S+   +W +AM  E++GL    T++    + +  + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H D+EQAFVQS L   V+M+LP G    SG IVRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  477 DVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCV 662          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.320e-38
Identity = 81/186 (43.55%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+P P +     +S+   +W +AM  E++GL    T++    + +  + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H D+EQAFVQS L   V+M+LP G    SG IVRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  621 DVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCV 806          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 3.130e-38
Identity = 79/186 (42.47%), Postives = 119/186 (63.98%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+  P +     +S+   +W  AM  E++GL    T++    +    + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A ++R+  ALAC    ++ H+D+EQAFVQS+L   V+M+LP G G  SG +VRL ++LYGL+QA+R ++ +L   L   GFEQS++DPCV
Sbjct:  443 DVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCV 628          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 6.090e-38
Identity = 79/186 (42.47%), Postives = 119/186 (63.98%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+  P +     +S+   +W  AM  E++GL    T++    +    + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A ++R+  ALAC    ++ H+D+EQAFVQS+L   V+M+LP G G  SG +VRL ++LYGL+QA+R ++ +L   L   GFEQS++DPCV
Sbjct:  710 DVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCV 895          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.580e-37
Identity = 82/197 (41.62%), Postives = 121/197 (61.42%), Query Frame = 0
Query:    3 NLLPIPYVKQDEVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            + + +P     +V+  P +     QS+   +W  AM  E++GL    T++    +    + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H+D+EQAFVQS L   V+M+LP G G  SG +VRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  764 DAVELPKELVQDVESEPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCV 960          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.490e-37
Identity = 80/186 (43.01%), Postives = 116/186 (62.37%), Query Frame = 0
Query:   14 EVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGE--VSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCV 197
            +V+P P +     +S+   +W +AM  E++GL    T++    + +  + ID++W+F+WK DE G +VK KARLV +G  Q+ G   +  FSPTA A + R+  ALAC    ++ H D+EQAF QS L   V M+LP G    SG IVRL ++LYGL+QA+R ++ +L   L   GFEQSL+DPCV
Sbjct:  208 DVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCV 393          
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Match: A0A6H5JKF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF2_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.670e-37
Identity = 86/184 (46.74%), Postives = 117/184 (63.59%), Query Frame = 0
Query:   19 PKTVNHVFQSQCKHVWLEAMKVEIDGLEANETWSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQ----EIGEVSAFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQGLGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCVY 198
            PKT+    +SQ   +W +A+  E  GL    T+SPV      E+ I +KW+F  K DE+G   K KARLV RGD Q    + GE+  F+PT   ++ R+ AALAC +   + HFD++QAFVQS+L + V+MRLPQG G+ SG IV+L ++LYGL+QA+R W + L R L   GF Q LAD CV+
Sbjct:  353 PKTLKESMRSQHSELWDDAVGREFFGLLDAGTFSPV--KQPVENAIIAKWVFNCKADEYGRPTKFKARLVARGDMQRASIDFGEL--FAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVF 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59879.13646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8Q9_9PHAE3.330e-3946.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPV1_9PHAE1.200e-3845.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LDZ0_9PHAE2.250e-3843.55CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE2.310e-3843.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE2.320e-3843.55CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKK1_9PHAE3.130e-3842.47Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE6.090e-3842.47Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JB16_9PHAE1.580e-3741.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV80_9PHAE2.490e-3743.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKF2_9PHAE2.670e-3746.74Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 50..194
e-value: 2.4E-26
score: 92.9
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 28..194
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59879contigH-paniculata_contig59879:322..915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59879.13646.1mRNA_H-paniculata_contig59879.13646.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59879 322..915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59879.13646.1 ID=prot_H-paniculata_contig59879.13646.1|Name=mRNA_H-paniculata_contig59879.13646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
KPNLLPIPYVKQDEVDPPPKTVNHVFQSQCKHVWLEAMKVEIDGLEANET
WSPVDDLSDEESPIDSKWIFQWKTDEHGYVVKVKARLVFRGDNQEIGEVS
AFSPTAPATTNRVAAALACARGRKIFHFDVEQAFVQSDLKDAVYMRLPQG
LGKGSGTIVRLRETLYGLRQAAREWFTKLARTLGAPGFEQSLADPCVY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like