prot_H-paniculata_contig59870.13645.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59870.13645.1
Unique Nameprot_H-paniculata_contig59870.13645.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
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BLAST of mRNA_H-paniculata_contig59870.13645.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.430e-8
Identity = 28/72 (38.89%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:    1 WFGLIDKYQNSSKQRRRILMRQLDGTTMKQNQDPDVFLARVFQLRDELAHMGEEVSEERLTDIVIEGLTDDY 72
            W  L  K+Q + + RRR L R+L+  TM+   DPD+F+  V+ L ++L  +G  V++E+L DI+++GL  +Y
Sbjct:  236 WKELESKFQPADEHRRRNLERELESATMRTGTDPDIFITHVWHLAEQLRFIGGTVTDEKLGDIILQGLPAEY 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59870.13645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE4.430e-838.89Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..91
e-value: 5.1E-12
score: 45.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59870contigH-paniculata_contig59870:488..790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59870.13645.1mRNA_H-paniculata_contig59870.13645.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59870 488..790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59870.13645.1 ID=prot_H-paniculata_contig59870.13645.1|Name=mRNA_H-paniculata_contig59870.13645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
WFGLIDKYQNSSKQRRRILMRQLDGTTMKQNQDPDVFLARVFQLRDELAH
MGEEVSEERLTDIVIEGLTDDYEQVKYNAERDPEFSLSEIEVTLRNMFAH
R
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