prot_H-paniculata_contig5986.13642.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5986.13642.1
Unique Nameprot_H-paniculata_contig5986.13642.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 7.370e-63
Identity = 155/186 (83.33%), Postives = 157/186 (84.41%), Query Frame = 0
Query:   38 YNRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGY--ERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXG-YNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKPAGG 220
            YNRRPGDWECPSCGNNCFASR+ECNRCQTPKP GAGGG   ER XXXXX  XXXXXXXXXXXX   XXXXXXXXXXX  YNRRPGDWDCP CGNHCFASR  CNRC T +P G GGG        XXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCP CGYNCFASRMECNRCHTPKP GG
Sbjct:   49 YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYGERGXXXXXXXXXXXXXXXXXXXGYSXXXXXXXXXXXXXYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGG----FERGXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGG 230          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: D8LIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ0_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 4.800e-43
Identity = 138/181 (76.24%), Postives = 140/181 (77.35%), Query Frame = 0
Query:   39 NRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKPAG 219
            N+RPGDWECPSCGNNCFASR ECNRCQTPKP GAGG       XXX  XXXXXX XXXXXXX XXXXXXXXXXX    R GDW CP CGN+CFA R ECNRCQT KP GEGG    XXXXXXXX XXXXXXXXXXXXXXXXXXXXXX   R GDW CP CG  CFA R ECNRC TPKP G
Sbjct:   47 NKRPGDWECPSCGNNCFASRSECNRCQTPKPAGAGG-------XXXXYXXXXXXYXXXXXXXYXXXXXXXXXXXXXXXREGDWTCPSCGNNCFAFRQECNRCQTPKPGGEGG----XXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXREGDWTCPSCGNICFAFRNECNRCQTPKPNG 216          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 2.920e-35
Identity = 135/178 (75.84%), Postives = 138/178 (77.53%), Query Frame = 0
Query:   42 PGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKPAG 219
            P  WECPSCGNNCFASR ECNRCQTPKP  AG         XX  XXXXXXXXXXXXXXXXXXXXXXXXXXG   R GDW CP CGN+CFA R ECNRCQT KP G+G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R GDW CP CG NCFA R ECNRC TPKP+G
Sbjct:    5 PPGWECPSCGNNCFASRSECNRCQTPKP--AGXXXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---REGDWACPSCGNNCFAFRQECNRCQTPKPGGDG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDWACPSCGNNCFAFRNECNRCQTPKPSG 174          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A8J6C3G0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C3G0_DIALT)

HSP 1 Score: 125 bits (313), Expect = 1.680e-31
Identity = 101/182 (55.49%), Postives = 111/182 (60.99%), Query Frame = 0
Query:   41 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKPAGGGG 222
            RPGDW CP+CG N FAS+  C RCQTPKP G GG  ++                            XXXX  G + RPGDW+CPGCG + FAS+  C RCQ  KP G G G  XXXXXXXXXXXXXXXXXXXXXXXXXX         RPGDW CPGC  N F+S+  C RC TPKPAGGGG
Sbjct:   27 RPGDWSCPTCGANVFASKNSCFRCQTPKP-GMGGDAQQGMFRGG---------------------GXXXXVGGGDVRPGDWNCPGCGANVFASKNSCFRCQAPKPGGGGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDV------RPGDWVCPGCQANVFSSKNSCFRCQTPKPAGGGG 180          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A2V0NK80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NK80_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 5.030e-31
Identity = 123/177 (69.49%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   41 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            RPGDW CPSCGNNC+A R  CNRC TPKP+G GGG    XXXX Y XXXXXXXXXXXXXXXXXXXXXXXXX     RPGDW CPGCGN+CF  R  CNRC   KP G G        XXXXXXXXXX  XXX  XXXXXXXXXXX   RPGDW C GCG NCFA R  CNRC  P+P
Sbjct:  147 RPGDWPCPSCGNNCYAFRNACNRCGTPKPDG-GGGAAGXXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXX-----RPGDWPCPGCGNNCFGWREACNRCGAPKPPGAG--------XXXXXXXXXXPGXXXARXXXXXXXXXXXXXARPGDWPCSGCGQNCFAWREACNRCGAPRP 309          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A5J4XE95_9CHLO (RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XE95_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 1.850e-24
Identity = 86/177 (48.59%), Postives = 93/177 (52.54%), Query Frame = 0
Query:   41 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            RPGDW CP C NNCFAS+  C +C  PKP  AG      XXXXX  XXXXXXXXXXXXX                 RPGDW CP C N CFAS+ +CNRC T KP G G    XXXXXXXX                            P DW CPGCG   +A R  CN+C+TPKP
Sbjct:  180 RPGDWPCPGCNNNCFASKSACPKCGAPKPADAGXXXXXXXXXXXXXXXXXXXXXXXXXXPRPK-----------EARPGDWPCPNCNNICFASKDKCNRCDTPKPPGAGXXXXXXXXXXXXGRVQAAPQGPAGLFA-------------PEDWTCPGCGNRNWARRNSCNQCNTPKP 332          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A7S2SNJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNJ9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.820e-21
Identity = 64/183 (34.97%), Postives = 73/183 (39.89%), Query Frame = 0
Query:   39 NRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPG--CGNHCFASRTECNRCQTQK--PAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKP 217
            N RPGDW CP C  N FASR EC +C+TPKP GAG           Y                               R GDW CP   C  H +ASRT C RC   +  PA  GGG +                                 ++RPGDW C  CG NCFASR  C +C+ PKP
Sbjct:  227 NTRPGDWTCPECRANVFASRNECYKCRTPKPPGAGESQPPYSGHTPYNGGYHVPPMGQGPPNGF--------------RAGDWLCPSPQCSAHNYASRTTCFRCNGPRGPPAPMGGGGYPPQQFAPYGGNQYQRRPP---------------AERPGDWKC-SCGANCFASRDRCFKCNAPKP 379          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A3A5V9G9_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A3A5V9G9_9ARCH)

HSP 1 Score: 93.6 bits (231), Expect = 1.500e-18
Identity = 78/178 (43.82%), Postives = 87/178 (48.88%), Query Frame = 0
Query:   44 DWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGGGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPGCGYNCFASRMECNRCHTPKPAGGG 221
            DW+CP CGN+ FA R ECNRC+ P+P G G    RSXXXXX  XXXXXXX                     N    DWDC  CGN  FA R ECN C   +  G G                          XXXXXXXXXX +    DWDC  CG + F+ R ECNRC  P+P GGG
Sbjct:  156 DWDCPECGNDNFAFRNECNRCEAPRPNGGG---NRSXXXXXXXXXXXXXXERFGGRN--------------NHGDNDWDCGECGNSNFAFRQECNMCSAPRSGGRG-------QSRGRHNDRQQRDNRGSNRXXXXXXXXXXXTFTHNDWDCGECGNSNFSFRQECNRCEAPRPGGGG 309          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: D7FHH5_ECTSI (Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.370e-18
Identity = 73/87 (83.91%), Postives = 75/87 (86.21%), Query Frame = 0
Query:   38 YNRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGG-YERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXX--GYNRRPGDW 121
            YNRRPGDWECP+CGNNCFASR+ECNRCQTPKP GAGG  Y   XXXXX Q   XXXXXXXXXXXXXXXXXXXXXXX  GYNRRPGDW
Sbjct:   49 YNRRPGDWECPNCGNNCFASRVECNRCQTPKPVGAGGXXYGEXXXXXXXQGGGXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDW 135          
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Match: A0A7S2STL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.870e-18
Identity = 68/112 (60.71%), Postives = 77/112 (68.75%), Query Frame = 0
Query:   39 NRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGGGYERSXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGG 150
            +RR GDW+CPSCG   FAS+  C +CQTP+P+G GGGY   XXXXX  XXXXXXXXXXXXXXXX            +RR GDWDCP CG HCFASR+ C +C T  P G GG
Sbjct:   37 DRRAGDWDCPSCGALVFASKSNCYKCQTPRPDG-GGGYGXXXXXXXXXXXXXXXXXXXXXXXXX------------DRRAGDWDCPSCGAHCFASRSTCFKCGTPNP-GPGG 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5986.13642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL5_9PHAE7.370e-6383.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ0_ECTSI4.800e-4376.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8L8_9PHAE2.920e-3575.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J6C3G0_DIALT1.680e-3155.49Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A2V0NK80_9CHLO5.030e-3169.49Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A5J4XE95_9CHLO1.850e-2448.59RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A7S2SNJ9_9STRA3.820e-2134.97Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A3A5V9G9_9ARCH1.500e-1843.82Uncharacterized protein n=1 Tax=Candidatus Poseido... [more]
D7FHH5_ECTSI2.370e-1883.91Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocar... [more]
A0A7S2STL9_9STRA2.870e-1860.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 106..116
score: 42.05
coord: 16..27
score: 45.83
coord: 157..175
score: 40.13
coord: 80..95
score: 54.69
NoneNo IPR availableGENE3D4.10.1060.10coord: 182..222
e-value: 1.7E-11
score: 45.1
NoneNo IPR availableGENE3D4.10.1060.10coord: 35..72
e-value: 6.4E-12
score: 46.5
coord: 111..148
e-value: 5.0E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR23238:SF26GH13594P-RELATEDcoord: 7..98
NoneNo IPR availablePANTHERPTHR23238:SF26GH13594P-RELATEDcoord: 156..222
coord: 87..173
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 119..143
e-value: 1.8E-6
score: 37.5
coord: 191..215
e-value: 8.4E-7
score: 38.6
coord: 43..67
e-value: 3.3E-7
score: 39.9
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 189..217
e-value: 7.1E-9
score: 34.8
coord: 117..145
e-value: 1.2E-8
score: 34.1
coord: 41..69
e-value: 1.0E-8
score: 34.4
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 41..70
score: 10.794
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 189..218
score: 10.444
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 117..146
score: 10.229
IPR034870TAF15/EWS/TLS familyPANTHERPTHR23238RNA BINDING PROTEINcoord: 156..222
coord: 7..98
coord: 87..173
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 181..219
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 33..71
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 109..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5986contigH-paniculata_contig5986:4339..8744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5986.13642.1mRNA_H-paniculata_contig5986.13642.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5986 3468..8744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5986.13642.1 ID=prot_H-paniculata_contig5986.13642.1|Name=mRNA_H-paniculata_contig5986.13642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MSYYNDGGGHGHGGGGGGGGGGSWGGGGERGGGGGGGYNRRPGDWECPSC
GNNCFASRIECNRCQTPKPEGAGGGYERSGGGGGYQGGGGGGYGGGSGYH
GGGGGYGGGGGGGYNRRPGDWDCPGCGNHCFASRTECNRCQTQKPAGEGG
GSFGDRGGGGGYHGGGGGYHGGGGGYGGGGGGGGGYSKRPGDWDCPGCGY
NCFASRMECNRCHTPKPAGGGGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR034870TET_fam
IPR036443Znf_RanBP2_sf